Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is 116621988
Identifier: 116621988
GI number: 116621988
Start: 3634879
End: 3637095
Strand: Reverse
Name: 116621988
Synonym: Acid_2873
Alternate gene names: NA
Gene position: 3637095-3634879 (Counterclockwise)
Preceding gene: 116621989
Following gene: 116621987
Centisome position: 36.5
GC content: 61.89
Gene sequence:
>2217_bases ATGATAGATGGCTGCGTGACCCTGAACTTACTCAAACACCTGCTAATCCTGATGCTTCTCTGTGCCGCACACGCGCAACC CGGCGTACCCGATCTTACAAAGTATGTGAACCCGTTCATCGGCACCGGCCAGGGCGCGCCCGATTACGGCATGGGCAATG CCGCCGGCAATACGCCGCCCGGCGCGGCATTCCCCTTCGGCATGGTTCTCTGGAGTCCCGACACCACCACTCAATCCGGA GGCTACCGCTACGAACACACCGCCATCAACGGCTTCTCCCTCACCCATTTCTCGGGCCGCGGAATCTCCTGCTGGCAGGA CATTCCGTTCCTTCCCGTACCCGGCGCCGTCTCCGCTTCGCCGGCCGCTACTTTTTCTCACGCCAATGAGAATGCCTCGC CCGGATCTTACGCGGTCAACCTCGATAACGGAGTCGGCGTCGAACTTACGGTGACTCAGCGCACGGGGTTCGCCCGCTTC AGCTTTCCCTCTCCAAACGGCACCATCCTGGTCAACAGCGGAGGCAGCGCCAATGGCAACTGGGGCGCCAACTGGATCAA AGTCAACGGCGATCGCCAGGTATACGGAGCTGTGACCAGCGGCAATTGCGGTGGATCTTTCAGCTACACCGTCTATTTCG TCGCGCTCTTCGACCAGACCTTCGTGGATTACGGCGACGCACCGCAATCGGGCGTTCATCTGACCTTCGACACCTCCGCC AATTCCACGGTGCGCGTCCGAGTCGGACTCTCGTTCGTCAGCTTCACCAACGCCTATACCAACATGACCTCGGAAGTCAC CGGTTGGGATTTCGACGCTGTTCGCGAGCGTGCCAAAGCCGCGTGGAACCGGCGTCTCAACAGCATCCGCGCCGAAGGCG CCGACGACGATCGGATGTCCGTCTTCTACACGGCCCTGTATCACGCCTCGATCCACCCCAGCACCTTCAGCGATGCCAAC GGCGATTATCTGGGATTCGACGGACGCATCCACCGCACCGATCGCATCCAGTATCACAACATTCCCGCCTGGGATTTTTA CCGCTCGCTCGCTCCGCTCCTCGCCATTACGGCTCCCGACGTGGCCAGCGACCTGGCCCAATCGCTTGTCAATGACGCGC AACAGGATCCGGGCGGCGGTCTTCCGCGCTGGGTGCATGCCGCCACCGATTCCTGTGGCATGTTCGGCGATGGCGGCACC AAAATCATCGCCACCGCCTATGCCTTCGGAGCCACGAACTTCGACACCCAGGCCGCCCTCACCGCCATGATCCGCGGCGC CACCCGCACCGACACCACCGCCGCCGGATGTCCTGTCCGCGAAGGCCTCGCCGACTATCTCGCGCTCGGCTACGTCTCCA CCGCAACCTGGGGCTCGGTCGCCCGCACGCTCGAATATGCGACCAGCGATTTTTCGATCGCCGAGTTCGCCGGCGCGCTC GGCGATACCGCCAATTACCGTTACCTCCTCAAACGCGCCCAAAACTGGCGGAATCTGATGAACGGCAATTACATCGTTCC GCGCCGTCCGGACGGAACATTTGTGCAGGATGTCGGCCCCGATGGCTGCGTCAGCGATGGCTTCATCGAAGGCAGCGAAG GCCAGTACGGCTTCATGGTGCGCTTCAACGCGCAAGGTCTCTTTTCCGCTATGGGCAGCCGCGCCGCGGCGCTCGCGCGG CTTGATCGCCATTTCCAGCAGCTCAACGCCGGACCCTGCAGCGAGTTCGCCTTCATGGGCAACGAGGTCTCTCTCAAGAC TCCGTGGATGTATGCCTTCGCCGGCGCGCCGTGGAAGACGCAGGAGGTAGTCAGGCGCACCCTCGCGGAGTTGTATTCCA ACACTCCCGGCGGAATGCCCGGGAACGACGATGGCGGAGTCCTCAGCGCGTGGTATGTCCTCTCCGCCATCGGCCTCTAT CCGCAGATCTCGGGCGTGGGAGGGCTGGTCGTCAGCAGCCCTGTATTCCCTCACGTCAGCATCGCGCTCCCGAACGGCGC TTCACTCGGTATCTCCGCCCCGGCCGCTTCCGTGGAAAACCGGTACGTGCAAAATCTCAAAATTAACGCGCAGGATTACA TCAGTCCGTGGGTCCCGTGGAGCGTGCTTTCAAACGGTGCGACGCTCGAGTTCGTATTGGCCGGAACACCCAATCTATCC TGGGGTGTCCAAACCAACGCCGCGCCTCCTTCATTCGATATCCCCAATCTCGACTAA
Upstream 100 bases:
>100_bases GGGCAGGCGCTTCCGCCTGCCGATCCTTACCAGCTTTCCCAGTACTACCGTCAGCCTCTATCCCGGTTTTATTGTATTCG GCTCCGCTGCCTCTCCGCAG
Downstream 100 bases:
>100_bases CTACAGAAAATATCGTATTGCCGCGACTCGGCCGCTTCGAATACGTTCATATAGTGCCCGTCCTCCGGCGCTACCCGATG CTCGCTCTCGCGCTGTTGCT
Product: putative alpha-1,2-mannosidase
Products: NA
Alternate protein names: Alpha-1 2-Mannosidase Family Protein; Glycoside Hydrolase Family; Glycosyl Hydrolase Family; Secreted Protein; Glycoside Hydrolase Family Protein; Sugar Hydrolase; Outer Membrane Protein; Exported Alpha-1 2-Mannosidase; Alpha-1 2-Mannosidase Protein; Immunoreactive; Antigen; Lipoprotein; Mannosidase
Number of amino acids: Translated: 738; Mature: 738
Protein sequence:
>738_residues MIDGCVTLNLLKHLLILMLLCAAHAQPGVPDLTKYVNPFIGTGQGAPDYGMGNAAGNTPPGAAFPFGMVLWSPDTTTQSG GYRYEHTAINGFSLTHFSGRGISCWQDIPFLPVPGAVSASPAATFSHANENASPGSYAVNLDNGVGVELTVTQRTGFARF SFPSPNGTILVNSGGSANGNWGANWIKVNGDRQVYGAVTSGNCGGSFSYTVYFVALFDQTFVDYGDAPQSGVHLTFDTSA NSTVRVRVGLSFVSFTNAYTNMTSEVTGWDFDAVRERAKAAWNRRLNSIRAEGADDDRMSVFYTALYHASIHPSTFSDAN GDYLGFDGRIHRTDRIQYHNIPAWDFYRSLAPLLAITAPDVASDLAQSLVNDAQQDPGGGLPRWVHAATDSCGMFGDGGT KIIATAYAFGATNFDTQAALTAMIRGATRTDTTAAGCPVREGLADYLALGYVSTATWGSVARTLEYATSDFSIAEFAGAL GDTANYRYLLKRAQNWRNLMNGNYIVPRRPDGTFVQDVGPDGCVSDGFIEGSEGQYGFMVRFNAQGLFSAMGSRAAALAR LDRHFQQLNAGPCSEFAFMGNEVSLKTPWMYAFAGAPWKTQEVVRRTLAELYSNTPGGMPGNDDGGVLSAWYVLSAIGLY PQISGVGGLVVSSPVFPHVSIALPNGASLGISAPAASVENRYVQNLKINAQDYISPWVPWSVLSNGATLEFVLAGTPNLS WGVQTNAAPPSFDIPNLD
Sequences:
>Translated_738_residues MIDGCVTLNLLKHLLILMLLCAAHAQPGVPDLTKYVNPFIGTGQGAPDYGMGNAAGNTPPGAAFPFGMVLWSPDTTTQSG GYRYEHTAINGFSLTHFSGRGISCWQDIPFLPVPGAVSASPAATFSHANENASPGSYAVNLDNGVGVELTVTQRTGFARF SFPSPNGTILVNSGGSANGNWGANWIKVNGDRQVYGAVTSGNCGGSFSYTVYFVALFDQTFVDYGDAPQSGVHLTFDTSA NSTVRVRVGLSFVSFTNAYTNMTSEVTGWDFDAVRERAKAAWNRRLNSIRAEGADDDRMSVFYTALYHASIHPSTFSDAN GDYLGFDGRIHRTDRIQYHNIPAWDFYRSLAPLLAITAPDVASDLAQSLVNDAQQDPGGGLPRWVHAATDSCGMFGDGGT KIIATAYAFGATNFDTQAALTAMIRGATRTDTTAAGCPVREGLADYLALGYVSTATWGSVARTLEYATSDFSIAEFAGAL GDTANYRYLLKRAQNWRNLMNGNYIVPRRPDGTFVQDVGPDGCVSDGFIEGSEGQYGFMVRFNAQGLFSAMGSRAAALAR LDRHFQQLNAGPCSEFAFMGNEVSLKTPWMYAFAGAPWKTQEVVRRTLAELYSNTPGGMPGNDDGGVLSAWYVLSAIGLY PQISGVGGLVVSSPVFPHVSIALPNGASLGISAPAASVENRYVQNLKINAQDYISPWVPWSVLSNGATLEFVLAGTPNLS WGVQTNAAPPSFDIPNLD >Mature_738_residues MIDGCVTLNLLKHLLILMLLCAAHAQPGVPDLTKYVNPFIGTGQGAPDYGMGNAAGNTPPGAAFPFGMVLWSPDTTTQSG GYRYEHTAINGFSLTHFSGRGISCWQDIPFLPVPGAVSASPAATFSHANENASPGSYAVNLDNGVGVELTVTQRTGFARF SFPSPNGTILVNSGGSANGNWGANWIKVNGDRQVYGAVTSGNCGGSFSYTVYFVALFDQTFVDYGDAPQSGVHLTFDTSA NSTVRVRVGLSFVSFTNAYTNMTSEVTGWDFDAVRERAKAAWNRRLNSIRAEGADDDRMSVFYTALYHASIHPSTFSDAN GDYLGFDGRIHRTDRIQYHNIPAWDFYRSLAPLLAITAPDVASDLAQSLVNDAQQDPGGGLPRWVHAATDSCGMFGDGGT KIIATAYAFGATNFDTQAALTAMIRGATRTDTTAAGCPVREGLADYLALGYVSTATWGSVARTLEYATSDFSIAEFAGAL GDTANYRYLLKRAQNWRNLMNGNYIVPRRPDGTFVQDVGPDGCVSDGFIEGSEGQYGFMVRFNAQGLFSAMGSRAAALAR LDRHFQQLNAGPCSEFAFMGNEVSLKTPWMYAFAGAPWKTQEVVRRTLAELYSNTPGGMPGNDDGGVLSAWYVLSAIGLY PQISGVGGLVVSSPVFPHVSIALPNGASLGISAPAASVENRYVQNLKINAQDYISPWVPWSVLSNGATLEFVLAGTPNLS WGVQTNAAPPSFDIPNLD
Specific function: Unknown
COG id: COG3537
COG function: function code G; Putative alpha-1,2-mannosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78698; Mature: 78698
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDGCVTLNLLKHLLILMLLCAAHAQPGVPDLTKYVNPFIGTGQGAPDYGMGNAAGNTPP CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC GAAFPFGMVLWSPDTTTQSGGYRYEHTAINGFSLTHFSGRGISCWQDIPFLPVPGAVSAS CCCCCCEEEEECCCCCCCCCCEEEEEEEECCEEEEEECCCCCCHHHCCCCCCCCCCCCCC PAATFSHANENASPGSYAVNLDNGVGVELTVTQRTGFARFSFPSPNGTILVNSGGSANGN CCHHHHCCCCCCCCCCEEEECCCCCCEEEEEECCCCEEEEECCCCCCEEEEECCCCCCCC WGANWIKVNGDRQVYGAVTSGNCGGSFSYTVYFVALFDQTFVDYGDAPQSGVHLTFDTSA CCCEEEEECCCCEEEEEEECCCCCCCCEEEEEEEEEHHHHHHCCCCCCCCCEEEEEECCC NSTVRVRVGLSFVSFTNAYTNMTSEVTGWDFDAVRERAKAAWNRRLNSIRAEGADDDRMS CCEEEEEEEEEEHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH VFYTALYHASIHPSTFSDANGDYLGFDGRIHRTDRIQYHNIPAWDFYRSLAPLLAITAPD HEEEEHHHCCCCCCCCCCCCCCEECCCCEEECCCCEEECCCCHHHHHHHHHHHHEECCCH VASDLAQSLVNDAQQDPGGGLPRWVHAATDSCGMFGDGGTKIIATAYAFGATNFDTQAAL HHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHH TAMIRGATRTDTTAAGCPVREGLADYLALGYVSTATWGSVARTLEYATSDFSIAEFAGAL HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHH GDTANYRYLLKRAQNWRNLMNGNYIVPRRPDGTFVQDVGPDGCVSDGFIEGSEGQYGFMV CCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEE RFNAQGLFSAMGSRAAALARLDRHFQQLNAGPCSEFAFMGNEVSLKTPWMYAFAGAPWKT EECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEECCCEEEEECCCCCCH QEVVRRTLAELYSNTPGGMPGNDDGGVLSAWYVLSAIGLYPQISGVGGLVVSSPVFPHVS HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCEEE IALPNGASLGISAPAASVENRYVQNLKINAQDYISPWVPWSVLSNGATLEFVLAGTPNLS EECCCCCCCCCCCCHHHHHHHHHHHEEECHHHHCCCCCCHHHHCCCCEEEEEEECCCCCC WGVQTNAAPPSFDIPNLD CCEECCCCCCCCCCCCCC >Mature Secondary Structure MIDGCVTLNLLKHLLILMLLCAAHAQPGVPDLTKYVNPFIGTGQGAPDYGMGNAAGNTPP CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC GAAFPFGMVLWSPDTTTQSGGYRYEHTAINGFSLTHFSGRGISCWQDIPFLPVPGAVSAS CCCCCCEEEEECCCCCCCCCCEEEEEEEECCEEEEEECCCCCCHHHCCCCCCCCCCCCCC PAATFSHANENASPGSYAVNLDNGVGVELTVTQRTGFARFSFPSPNGTILVNSGGSANGN CCHHHHCCCCCCCCCCEEEECCCCCCEEEEEECCCCEEEEECCCCCCEEEEECCCCCCCC WGANWIKVNGDRQVYGAVTSGNCGGSFSYTVYFVALFDQTFVDYGDAPQSGVHLTFDTSA CCCEEEEECCCCEEEEEEECCCCCCCCEEEEEEEEEHHHHHHCCCCCCCCCEEEEEECCC NSTVRVRVGLSFVSFTNAYTNMTSEVTGWDFDAVRERAKAAWNRRLNSIRAEGADDDRMS CCEEEEEEEEEEHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH VFYTALYHASIHPSTFSDANGDYLGFDGRIHRTDRIQYHNIPAWDFYRSLAPLLAITAPD HEEEEHHHCCCCCCCCCCCCCCEECCCCEEECCCCEEECCCCHHHHHHHHHHHHEECCCH VASDLAQSLVNDAQQDPGGGLPRWVHAATDSCGMFGDGGTKIIATAYAFGATNFDTQAAL HHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHH TAMIRGATRTDTTAAGCPVREGLADYLALGYVSTATWGSVARTLEYATSDFSIAEFAGAL HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHH GDTANYRYLLKRAQNWRNLMNGNYIVPRRPDGTFVQDVGPDGCVSDGFIEGSEGQYGFMV CCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEE RFNAQGLFSAMGSRAAALARLDRHFQQLNAGPCSEFAFMGNEVSLKTPWMYAFAGAPWKT EECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEECCCEEEEECCCCCCH QEVVRRTLAELYSNTPGGMPGNDDGGVLSAWYVLSAIGLYPQISGVGGLVVSSPVFPHVS HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCEEE IALPNGASLGISAPAASVENRYVQNLKINAQDYISPWVPWSVLSNGATLEFVLAGTPNLS EECCCCCCCCCCCCHHHHHHHHHHHEEECHHHHCCCCCCHHHHCCCCEEEEEEECCCCCC WGVQTNAAPPSFDIPNLD CCEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA