Click here to switch to the map view.

The map label for this gene is dsbE [C]

Identifier: 116517059

GI number: 116517059

Start: 896510

End: 897067

Strand: Direct

Name: dsbE [C]

Synonym: SPD_0886

Alternate gene names: 116517059

Gene position: 896510-897067 (Clockwise)

Preceding gene: 116516271

Following gene: 116516274

Centisome position: 43.82

GC content: 37.99

Gene sequence:

>558_bases
ATGAAAAAAGTAATGTTTGCTGGCTTAAGTCTCTTGTCATTAGTTGTATTGATGGCCTGTGGTGAGGAAGAAACTAAAAA
GACTCAAGCAGCACAACAGCCAAAACAACAAACGACTGTACAACAAATTTCTGTTGGAAAAGATGTTCCAGACTTTACAT
TGCAATCCATGGATGGCAAAGAAGTTAAGTTATCTGATTTTAAGGGTAAAAAGGTTTACTTGAAGTTTTGGGCTTCATGG
TGTGGTCCATGCAAGAAAAGTATGCCAGAGTTGATGGAACTAGCGGCGAAACCAGATCGTGATTTCGAAATTCTTACTGT
CATTGCACCAGGAATTCAAGGTGAAAAAACTGTTGAGCAATTCCCACAATGGTTCCAAGAACAAGGATATAAGGATATCC
CAGTTCTTTATGATACCAAAGCAACCACCTTCCAAGCTTATCAAATTCGAAGCATTCCTACAGAATATTTAATTGATAGC
CAAGGAAAGATTGGAAAGATTCAATTTGGTGCTATCAGTAATGCGGATGCAGAAGCAGCATTTAAAGAAATGAACTAG

Upstream 100 bases:

>100_bases
CTAAAGAAAATTGGTGGTTTCCTCATTGTTTTAATGGGAATTTTGTTACTATTAGGACAAGTAAATGTTCTAGCTGGAAT
TTTTGAATAAAGGAGGACAA

Downstream 100 bases:

>100_bases
AATCGATAAAATCTGATTACAAGATGTAGTCAGATTTTGGTAACTTCTAAAACTAACTTCCAGTTTCCCACAACCTAGCT
TTTAGTATGAGAAAAACGCG

Product: thioredoxin family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MKKVMFAGLSLLSLVVLMACGEEETKKTQAAQQPKQQTTVQQISVGKDVPDFTLQSMDGKEVKLSDFKGKKVYLKFWASW
CGPCKKSMPELMELAAKPDRDFEILTVIAPGIQGEKTVEQFPQWFQEQGYKDIPVLYDTKATTFQAYQIRSIPTEYLIDS
QGKIGKIQFGAISNADAEAAFKEMN

Sequences:

>Translated_185_residues
MKKVMFAGLSLLSLVVLMACGEEETKKTQAAQQPKQQTTVQQISVGKDVPDFTLQSMDGKEVKLSDFKGKKVYLKFWASW
CGPCKKSMPELMELAAKPDRDFEILTVIAPGIQGEKTVEQFPQWFQEQGYKDIPVLYDTKATTFQAYQIRSIPTEYLIDS
QGKIGKIQFGAISNADAEAAFKEMN
>Mature_185_residues
MKKVMFAGLSLLSLVVLMACGEEETKKTQAAQQPKQQTTVQQISVGKDVPDFTLQSMDGKEVKLSDFKGKKVYLKFWASW
CGPCKKSMPELMELAAKPDRDFEILTVIAPGIQGEKTVEQFPQWFQEQGYKDIPVLYDTKATTFQAYQIRSIPTEYLIDS
QGKIGKIQFGAISNADAEAAFKEMN

Specific function: Involved In Disulfide Bond Formation. Catalyzes A Late, Reductive Step In The Assembly Of Periplasmic C-Type Cytochromes, Probably The Reduction Of Disulfide Bonds Of The Apocytochrome C To Allow Covalent Linkage With The Heme. Possible Subunit Of A Heme

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013740
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF08534 Redoxin [H]

EC number: NA

Molecular weight: Translated: 20746; Mature: 20746

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVMFAGLSLLSLVVLMACGEEETKKTQAAQQPKQQTTVQQISVGKDVPDFTLQSMDGK
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHCCCCC
EVKLSDFKGKKVYLKFWASWCGPCKKSMPELMELAAKPDRDFEILTVIAPGIQGEKTVEQ
EEEECCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHH
FPQWFQEQGYKDIPVLYDTKATTFQAYQIRSIPTEYLIDSQGKIGKIQFGAISNADAEAA
HHHHHHHCCCCCCCEEECCCCCEEEEEEECCCCHHHHCCCCCCEEEEEECCCCCCCHHHH
FKEMN
HHCCC
>Mature Secondary Structure
MKKVMFAGLSLLSLVVLMACGEEETKKTQAAQQPKQQTTVQQISVGKDVPDFTLQSMDGK
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHCCCCC
EVKLSDFKGKKVYLKFWASWCGPCKKSMPELMELAAKPDRDFEILTVIAPGIQGEKTVEQ
EEEECCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHH
FPQWFQEQGYKDIPVLYDTKATTFQAYQIRSIPTEYLIDSQGKIGKIQFGAISNADAEAA
HHHHHHHCCCCCCCEEECCCCCEEEEEEECCCCHHHHCCCCCCEEEEEECCCCCCCHHHH
FKEMN
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]