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The map label for this gene is ccdA-2 [C]

Identifier: 116516271

GI number: 116516271

Start: 895792

End: 896499

Strand: Direct

Name: ccdA-2 [C]

Synonym: SPD_0885

Alternate gene names: 116516271

Gene position: 895792-896499 (Clockwise)

Preceding gene: 116517020

Following gene: 116517059

Centisome position: 43.78

GC content: 36.16

Gene sequence:

>708_bases
TTGGAAACGATAGTATTTTTAATCTCTGTTTTTCTAGCAGGTGTTTTATCCTTTTTTTCTCCTTGTATTTTTCCTCTTCT
GCCAGTCTATGCTGGGATTTTATTGGATGATCAAGAAAGTGCAAAAAGCTTTTCTTTGTTTGGGAGAAAGGTTCTCTGGT
CAGGCTTGATTCGAACACTTTGCTTTATCGCTGGTATCTCTCTCATTTTCTTTATTCTAGGCTTTGGTGCTGGTTACTTT
GGTCATATTCTCTATGCAAATTGGTTTCGATATGTCATGGGAGCTATTATTATCATTTTGGGTCTTCACCAGATGGAAAT
TTTTCATTTGAAGAAATTAGAAGTTCAAAAAAGTTTTACCTTTAAAAAATCAGATTCTAATCGTTATTGGTCAGCTTTTT
TACTTGGTATTACCTTTAGCTTTGGTTGGACACCTTGTATTGGTCCAGTTTTAAGTTCTGTTTTAGCACTTGCGGCTTCT
GGAGGCAATGGTGCTTGGCAAGGAGCGATTTATACTCTCATTTACACTCTGGGCATGGCCCTTCCTTTCTTGGTCTTGGC
ACTAGCTTCAGGTCTAGTCATGCCATATTTTAGTAAAATCAAGCGTCATATGATGCTACTAAAGAAAATTGGTGGTTTCC
TCATTGTTTTAATGGGAATTTTGTTACTATTAGGACAAGTAAATGTTCTAGCTGGAATTTTTGAATAA

Upstream 100 bases:

>100_bases
GTCCAATAGTGCCCGATACGATTTTGCGTAGCAGAAAGCTTACAAATAAAATTGAATATAGTAAAATAGGATTAGAATTA
TTAAGAAAGTTGGTTCTTTA

Downstream 100 bases:

>100_bases
AGGAGGACAAATGAAAAAAGTAATGTTTGCTGGCTTAAGTCTCTTGTCATTAGTTGTATTGATGGCCTGTGGTGAGGAAG
AAACTAAAAAGACTCAAGCA

Product: cytochrome c-type biogenesis protein CcdA

Products: DsbDoxidized; DsbGreduced [C]

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
METIVFLISVFLAGVLSFFSPCIFPLLPVYAGILLDDQESAKSFSLFGRKVLWSGLIRTLCFIAGISLIFFILGFGAGYF
GHILYANWFRYVMGAIIIILGLHQMEIFHLKKLEVQKSFTFKKSDSNRYWSAFLLGITFSFGWTPCIGPVLSSVLALAAS
GGNGAWQGAIYTLIYTLGMALPFLVLALASGLVMPYFSKIKRHMMLLKKIGGFLIVLMGILLLLGQVNVLAGIFE

Sequences:

>Translated_235_residues
METIVFLISVFLAGVLSFFSPCIFPLLPVYAGILLDDQESAKSFSLFGRKVLWSGLIRTLCFIAGISLIFFILGFGAGYF
GHILYANWFRYVMGAIIIILGLHQMEIFHLKKLEVQKSFTFKKSDSNRYWSAFLLGITFSFGWTPCIGPVLSSVLALAAS
GGNGAWQGAIYTLIYTLGMALPFLVLALASGLVMPYFSKIKRHMMLLKKIGGFLIVLMGILLLLGQVNVLAGIFE
>Mature_235_residues
METIVFLISVFLAGVLSFFSPCIFPLLPVYAGILLDDQESAKSFSLFGRKVLWSGLIRTLCFIAGISLIFFILGFGAGYF
GHILYANWFRYVMGAIIIILGLHQMEIFHLKKLEVQKSFTFKKSDSNRYWSAFLLGITFSFGWTPCIGPVLSSVLALAAS
GGNGAWQGAIYTLIYTLGMALPFLVLALASGLVMPYFSKIKRHMMLLKKIGGFLIVLMGILLLLGQVNVLAGIFE

Specific function: Could be involved in cytochrome c synthesis [H]

COG id: COG0785

COG function: function code O; Cytochrome c biogenesis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DsbD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003834 [H]

Pfam domain/function: PF02683 DsbD [H]

EC number: 1.8.1.8 [C]

Molecular weight: Translated: 25933; Mature: 25933

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METIVFLISVFLAGVLSFFSPCIFPLLPVYAGILLDDQESAKSFSLFGRKVLWSGLIRTL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
CFIAGISLIFFILGFGAGYFGHILYANWFRYVMGAIIIILGLHQMEIFHLKKLEVQKSFT
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
FKKSDSNRYWSAFLLGITFSFGWTPCIGPVLSSVLALAASGGNGAWQGAIYTLIYTLGMA
CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LPFLVLALASGLVMPYFSKIKRHMMLLKKIGGFLIVLMGILLLLGQVNVLAGIFE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
METIVFLISVFLAGVLSFFSPCIFPLLPVYAGILLDDQESAKSFSLFGRKVLWSGLIRTL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
CFIAGISLIFFILGFGAGYFGHILYANWFRYVMGAIIIILGLHQMEIFHLKKLEVQKSFT
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
FKKSDSNRYWSAFLLGITFSFGWTPCIGPVLSSVLALAASGGNGAWQGAIYTLIYTLGMA
CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LPFLVLALASGLVMPYFSKIKRHMMLLKKIGGFLIVLMGILLLLGQVNVLAGIFE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DsbGoxidized; DsbDreduced/thiol:disulfide reductase [C]

Specific reaction: DsbDreduced/thiol:disulfide reductase + DsbCoxidized = DsbDoxidized + DsbCreduced DsbGoxidized + DsbDreduced/thiol:disulfide reductase = DsbGreduced + DsbDoxidized [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]