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The map label for this gene is yfnA [H]

Identifier: 116516274

GI number: 116516274

Start: 897441

End: 898832

Strand: Direct

Name: yfnA [H]

Synonym: SPD_0887

Alternate gene names: 116516274

Gene position: 897441-898832 (Clockwise)

Preceding gene: 116517059

Following gene: 116515739

Centisome position: 43.86

GC content: 41.09

Gene sequence:

>1392_bases
ATGAATATATTTAGAACAAAGAATGTTAGTTTAGATAAAACAGAGATGCATAGGCATTTGAAGTTATGGGATTTGATTTT
GCTGGGTATTGGAGCCATGGTAGGGACAGGTGTTTTTACAATCACAGGTACTGCAGCTGCTACACTTGCTGGTCCAGCAC
TAGTGATTTCAATCGTTATTTCTGCCTTGTGTGTGGGATTATCAGCCCTCTTTTTTGCAGAATTTGCCTCGCGAGTACCC
GCTACAGGAGGTGCCTATAGTTACCTCTATGCTATCTTAGGAGAATTCCCTGCCTGGTTGGCTGGTTGGTTAACCATGAT
GGAGTTCATGACAGCCATATCAGGCGTAGCTTCGGGTTGGGCAGCTTATTTTAAAGGCTTGCTCTCTCAATACGGGATAG
CCCTTCCTCAGGCTTTAAATGGTACCTTTAATCCTCAAGCAGGGACATTTGTTGATTTATTGCCTATTCTTGTCTTGGTC
TTGGTGACTTCGCTTGTTTTACTAAATGCCAAGGCAGCCTTACGCTTTAATTCGATTCTAGTTATTTTGAAATTTTCCGC
TTTAGCTCTCTTTGTTTTAGTAGGAATTTGGAATATTAAGTTTGATAATTGGAGCAATTTTGCTCCTTACGGTTTTGGAC
AAATCTATGGAGCTAGTACTGGTATTATGGCTGGTGCGTCCTTGATGTTCTTCGGTTTTTTGGGATTTGAATCCATCTCT
ATGGCTGTAGATGAAGTCAAGACTCCTCAAAAAAATATTCCTAGAGGGATTGTCTTATCGCTTTCTATCGTAACCATTCT
CTATGCCTTGGTGACCCTTGTTTTGACTGGTGTGGTTCACTATAGTCATTTAAATGTCGATGATGCCGTTGCCTTTGCCC
TTCGTAGTGTTGGGATTAGTTGGGCAGCCAACTATGTGTCATTAGTGGCTATCTTGACCTTGATTACAGTTTGTATTTCG
ATGACCTATGCCCTATCGCGTATGATTTACAGTTTAGCACGTGACGGCTTAGTGCCTGCTGCCTTTAAGGAACTGACGAA
GACTAGCAAGGTACCAAAGAATGCTACTATCTTGACAGGTCTAGCTTCAGCAGTAGCAGCAGGAATGTTCCCACTAGCCA
GTATTGCAGCCTTTTTAAATATTTGTACCTTAGCCTACTTGATCCTGCTGGCTTATGGTCTGATTCGCTTACGGAAAGAA
AAAGGAATGCCCAAAGCTGGGGAATTTAAAACACCATTGGTACCTCTGTTACCAATTTTATCGATCATCATTTGTTTATC
CTTCATGTTACAGTATAATGTGAACACCTGGATTGCTTTCCTAGTTGCGTTGTTAGTAGGAAGTATTATTTACTTCACTT
ATGGCTATAAGCATTCTACCATAGAAGAATAA

Upstream 100 bases:

>100_bases
TTACGGTAGTCAGATTTTTTTAGAAAAACATTTTATAAATATTCACATATCTCCTATATTTATGGTAAAATAGAATTATC
AGTTTATTTTGGAGTCAAAG

Downstream 100 bases:

>100_bases
AGTGAAAGTCTATTGAGTTGTTGACACTCAGCAGATTTTTATATGTGAAAGAAATTTCAAATTTTTTCTAAAAATATCTT
GACAGATTAAATTTTCAGGA

Product: amino acid permease family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
MNIFRTKNVSLDKTEMHRHLKLWDLILLGIGAMVGTGVFTITGTAAATLAGPALVISIVISALCVGLSALFFAEFASRVP
ATGGAYSYLYAILGEFPAWLAGWLTMMEFMTAISGVASGWAAYFKGLLSQYGIALPQALNGTFNPQAGTFVDLLPILVLV
LVTSLVLLNAKAALRFNSILVILKFSALALFVLVGIWNIKFDNWSNFAPYGFGQIYGASTGIMAGASLMFFGFLGFESIS
MAVDEVKTPQKNIPRGIVLSLSIVTILYALVTLVLTGVVHYSHLNVDDAVAFALRSVGISWAANYVSLVAILTLITVCIS
MTYALSRMIYSLARDGLVPAAFKELTKTSKVPKNATILTGLASAVAAGMFPLASIAAFLNICTLAYLILLAYGLIRLRKE
KGMPKAGEFKTPLVPLLPILSIIICLSFMLQYNVNTWIAFLVALLVGSIIYFTYGYKHSTIEE

Sequences:

>Translated_463_residues
MNIFRTKNVSLDKTEMHRHLKLWDLILLGIGAMVGTGVFTITGTAAATLAGPALVISIVISALCVGLSALFFAEFASRVP
ATGGAYSYLYAILGEFPAWLAGWLTMMEFMTAISGVASGWAAYFKGLLSQYGIALPQALNGTFNPQAGTFVDLLPILVLV
LVTSLVLLNAKAALRFNSILVILKFSALALFVLVGIWNIKFDNWSNFAPYGFGQIYGASTGIMAGASLMFFGFLGFESIS
MAVDEVKTPQKNIPRGIVLSLSIVTILYALVTLVLTGVVHYSHLNVDDAVAFALRSVGISWAANYVSLVAILTLITVCIS
MTYALSRMIYSLARDGLVPAAFKELTKTSKVPKNATILTGLASAVAAGMFPLASIAAFLNICTLAYLILLAYGLIRLRKE
KGMPKAGEFKTPLVPLLPILSIIICLSFMLQYNVNTWIAFLVALLVGSIIYFTYGYKHSTIEE
>Mature_463_residues
MNIFRTKNVSLDKTEMHRHLKLWDLILLGIGAMVGTGVFTITGTAAATLAGPALVISIVISALCVGLSALFFAEFASRVP
ATGGAYSYLYAILGEFPAWLAGWLTMMEFMTAISGVASGWAAYFKGLLSQYGIALPQALNGTFNPQAGTFVDLLPILVLV
LVTSLVLLNAKAALRFNSILVILKFSALALFVLVGIWNIKFDNWSNFAPYGFGQIYGASTGIMAGASLMFFGFLGFESIS
MAVDEVKTPQKNIPRGIVLSLSIVTILYALVTLVLTGVVHYSHLNVDDAVAFALRSVGISWAANYVSLVAILTLITVCIS
MTYALSRMIYSLARDGLVPAAFKELTKTSKVPKNATILTGLASAVAAGMFPLASIAAFLNICTLAYLILLAYGLIRLRKE
KGMPKAGEFKTPLVPLLPILSIIICLSFMLQYNVNTWIAFLVALLVGSIIYFTYGYKHSTIEE

Specific function: Transporter For The Intake Of S-Methylmethionine. [C]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Homo sapiens, GI110347453, Length=406, Percent_Identity=32.2660098522167, Blast_Score=184, Evalue=2e-46,
Organism=Homo sapiens, GI4507047, Length=436, Percent_Identity=29.5871559633028, Blast_Score=172, Evalue=4e-43,
Organism=Homo sapiens, GI258614005, Length=447, Percent_Identity=30.8724832214765, Blast_Score=172, Evalue=6e-43,
Organism=Homo sapiens, GI258614003, Length=447, Percent_Identity=30.8724832214765, Blast_Score=172, Evalue=8e-43,
Organism=Homo sapiens, GI258645169, Length=449, Percent_Identity=31.6258351893096, Blast_Score=170, Evalue=3e-42,
Organism=Homo sapiens, GI181337167, Length=385, Percent_Identity=30.1298701298701, Blast_Score=163, Evalue=3e-40,
Organism=Homo sapiens, GI114326544, Length=435, Percent_Identity=27.1264367816092, Blast_Score=159, Evalue=6e-39,
Organism=Homo sapiens, GI114326550, Length=435, Percent_Identity=27.1264367816092, Blast_Score=159, Evalue=6e-39,
Organism=Homo sapiens, GI7657683, Length=414, Percent_Identity=24.8792270531401, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI33286428, Length=391, Percent_Identity=24.2966751918159, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI115648063, Length=344, Percent_Identity=22.9651162790698, Blast_Score=70, Evalue=6e-12,
Organism=Homo sapiens, GI115648022, Length=344, Percent_Identity=22.9651162790698, Blast_Score=70, Evalue=6e-12,
Organism=Homo sapiens, GI187423910, Length=457, Percent_Identity=22.1006564551422, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI7657591, Length=457, Percent_Identity=22.1006564551422, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI71979932, Length=430, Percent_Identity=24.4186046511628, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI186910308, Length=412, Percent_Identity=22.8155339805825, Blast_Score=66, Evalue=7e-11,
Organism=Homo sapiens, GI186910306, Length=412, Percent_Identity=22.8155339805825, Blast_Score=66, Evalue=7e-11,
Organism=Homo sapiens, GI186910304, Length=412, Percent_Identity=22.8155339805825, Blast_Score=66, Evalue=7e-11,
Organism=Escherichia coli, GI87081708, Length=457, Percent_Identity=22.5382932166302, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI87082250, Length=361, Percent_Identity=25.4847645429363, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1788480, Length=468, Percent_Identity=23.7179487179487, Blast_Score=79, Evalue=6e-16,
Organism=Escherichia coli, GI1786302, Length=445, Percent_Identity=22.247191011236, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1790653, Length=448, Percent_Identity=24.1071428571429, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1789017, Length=412, Percent_Identity=24.2718446601942, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1786694, Length=285, Percent_Identity=25.9649122807018, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1786789, Length=442, Percent_Identity=23.5294117647059, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI87081869, Length=435, Percent_Identity=20.2298850574713, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI48994972, Length=370, Percent_Identity=21.6216216216216, Blast_Score=62, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17532491, Length=418, Percent_Identity=31.8181818181818, Blast_Score=205, Evalue=5e-53,
Organism=Caenorhabditis elegans, GI17531343, Length=483, Percent_Identity=29.1925465838509, Blast_Score=191, Evalue=6e-49,
Organism=Caenorhabditis elegans, GI17533459, Length=413, Percent_Identity=31.7191283292978, Blast_Score=188, Evalue=4e-48,
Organism=Caenorhabditis elegans, GI17568033, Length=419, Percent_Identity=26.491646778043, Blast_Score=89, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI32566699, Length=341, Percent_Identity=24.633431085044, Blast_Score=85, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI17540018, Length=417, Percent_Identity=25.1798561151079, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17537453, Length=422, Percent_Identity=22.0379146919431, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71982612, Length=443, Percent_Identity=22.7990970654628, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI71982608, Length=443, Percent_Identity=22.7990970654628, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24667468, Length=401, Percent_Identity=34.4139650872818, Blast_Score=230, Evalue=1e-60,
Organism=Drosophila melanogaster, GI24668806, Length=424, Percent_Identity=31.3679245283019, Blast_Score=202, Evalue=3e-52,
Organism=Drosophila melanogaster, GI21356285, Length=424, Percent_Identity=31.3679245283019, Blast_Score=202, Evalue=3e-52,
Organism=Drosophila melanogaster, GI24668802, Length=424, Percent_Identity=31.3679245283019, Blast_Score=202, Evalue=3e-52,
Organism=Drosophila melanogaster, GI221512776, Length=416, Percent_Identity=29.8076923076923, Blast_Score=192, Evalue=5e-49,
Organism=Drosophila melanogaster, GI24666159, Length=416, Percent_Identity=29.8076923076923, Blast_Score=192, Evalue=6e-49,
Organism=Drosophila melanogaster, GI281366235, Length=412, Percent_Identity=31.7961165048544, Blast_Score=167, Evalue=2e-41,
Organism=Drosophila melanogaster, GI116007820, Length=412, Percent_Identity=31.7961165048544, Blast_Score=167, Evalue=2e-41,
Organism=Drosophila melanogaster, GI161077963, Length=418, Percent_Identity=30.8612440191388, Blast_Score=167, Evalue=2e-41,
Organism=Drosophila melanogaster, GI116007818, Length=412, Percent_Identity=31.7961165048544, Blast_Score=164, Evalue=2e-40,
Organism=Drosophila melanogaster, GI85725152, Length=412, Percent_Identity=31.7961165048544, Blast_Score=164, Evalue=2e-40,
Organism=Drosophila melanogaster, GI221331183, Length=424, Percent_Identity=22.4056603773585, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI17647653, Length=424, Percent_Identity=22.4056603773585, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24664379, Length=424, Percent_Identity=22.4056603773585, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI21357367, Length=368, Percent_Identity=24.1847826086957, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI45550968, Length=355, Percent_Identity=24.5070422535211, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI19921172, Length=355, Percent_Identity=24.5070422535211, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24651635, Length=346, Percent_Identity=22.8323699421965, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24651633, Length=346, Percent_Identity=22.8323699421965, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293
- InterPro:   IPR015606 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 49803; Mature: 49803

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIFRTKNVSLDKTEMHRHLKLWDLILLGIGAMVGTGVFTITGTAAATLAGPALVISIVI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHH
SALCVGLSALFFAEFASRVPATGGAYSYLYAILGEFPAWLAGWLTMMEFMTAISGVASGW
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAYFKGLLSQYGIALPQALNGTFNPQAGTFVDLLPILVLVLVTSLVLLNAKAALRFNSIL
HHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VILKFSALALFVLVGIWNIKFDNWSNFAPYGFGQIYGASTGIMAGASLMFFGFLGFESIS
HHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHH
MAVDEVKTPQKNIPRGIVLSLSIVTILYALVTLVLTGVVHYSHLNVDDAVAFALRSVGIS
HHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
WAANYVSLVAILTLITVCISMTYALSRMIYSLARDGLVPAAFKELTKTSKVPKNATILTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHH
LASAVAAGMFPLASIAAFLNICTLAYLILLAYGLIRLRKEKGMPKAGEFKTPLVPLLPIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
SIIICLSFMLQYNVNTWIAFLVALLVGSIIYFTYGYKHSTIEE
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNIFRTKNVSLDKTEMHRHLKLWDLILLGIGAMVGTGVFTITGTAAATLAGPALVISIVI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHH
SALCVGLSALFFAEFASRVPATGGAYSYLYAILGEFPAWLAGWLTMMEFMTAISGVASGW
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAYFKGLLSQYGIALPQALNGTFNPQAGTFVDLLPILVLVLVTSLVLLNAKAALRFNSIL
HHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VILKFSALALFVLVGIWNIKFDNWSNFAPYGFGQIYGASTGIMAGASLMFFGFLGFESIS
HHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHH
MAVDEVKTPQKNIPRGIVLSLSIVTILYALVTLVLTGVVHYSHLNVDDAVAFALRSVGIS
HHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
WAANYVSLVAILTLITVCISMTYALSRMIYSLARDGLVPAAFKELTKTSKVPKNATILTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHH
LASAVAAGMFPLASIAAFLNICTLAYLILLAYGLIRLRKEKGMPKAGEFKTPLVPLLPIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
SIIICLSFMLQYNVNTWIAFLVALLVGSIIYFTYGYKHSTIEE
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]