Definition | Streptococcus pneumoniae D39, complete genome. |
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Accession | NC_008533 |
Length | 2,046,115 |
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The map label for this gene is 116516761
Identifier: 116516761
GI number: 116516761
Start: 1169201
End: 1169743
Strand: Reverse
Name: 116516761
Synonym: SPD_1136
Alternate gene names: NA
Gene position: 1169743-1169201 (Counterclockwise)
Preceding gene: 116516057
Following gene: 116516035
Centisome position: 57.17
GC content: 38.49
Gene sequence:
>543_bases ATGAAATTAAATATTCAAGAAATTCGTAAGCAGTCTGAAGGTTTGAACTTTGAACAAACGTTAGATTTAGTTGATGACCT GCGTGCACGTAATCAAGAAATTTTAGATGTAAAAGATATCCTTGCAGTTGGGAAAGTACAATATGAAGACCGTATGTATT TCTTAGATTATCAACTATCTTATACCATTGTTCTTGCTTCGAGTCGCAGTATGGAGCCAGTTGAGTTAGTTGAATCTTAT CCAGTCACGGAAGTTTTCATGGAAGGCGCAACTAACCAGCTAGATCAAGAAGTTTTAGATGATGACTTGGTCTTGCCCAT CGAAAATGGGGAGCTTGACCTTGCTGAGAGTGTATCAGACAATATCCTGCTAAACATTCCTATCAAGGTCTTGACGGCTG AAGAAGAAGCTGGTCAAGGATTTATCTCAGGAAATGACTGGCAAATCATGACAGAGGAAGAATACCAAGCTCAAAAAGCA GTAAAGAAAGAAGAAAACAGTCCTTTTGCTGGCTTACAAGGACTATTTGACGGAGATGAATAA
Upstream 100 bases:
>100_bases TAAATATGTTAAAATTTTGAATTTTAATTACAAAGTTTGGTGTGCTGATTTGTAGCCTTTTCATGGTATAATCAAGAGAG TAAATCTTTATGGAGGAAGT
Downstream 100 bases:
>100_bases TGGTCTTGTCAAAAAAACGAGCACGAAAGGTGCTAGAAGAAATCATTGCCCTCTTCCCAGATGCCAAGCCTAGTCTTGAT TTTACCAATCATTTTGAACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MKLNIQEIRKQSEGLNFEQTLDLVDDLRARNQEILDVKDILAVGKVQYEDRMYFLDYQLSYTIVLASSRSMEPVELVESY PVTEVFMEGATNQLDQEVLDDDLVLPIENGELDLAESVSDNILLNIPIKVLTAEEEAGQGFISGNDWQIMTEEEYQAQKA VKKEENSPFAGLQGLFDGDE
Sequences:
>Translated_180_residues MKLNIQEIRKQSEGLNFEQTLDLVDDLRARNQEILDVKDILAVGKVQYEDRMYFLDYQLSYTIVLASSRSMEPVELVESY PVTEVFMEGATNQLDQEVLDDDLVLPIENGELDLAESVSDNILLNIPIKVLTAEEEAGQGFISGNDWQIMTEEEYQAQKA VKKEENSPFAGLQGLFDGDE >Mature_180_residues MKLNIQEIRKQSEGLNFEQTLDLVDDLRARNQEILDVKDILAVGKVQYEDRMYFLDYQLSYTIVLASSRSMEPVELVESY PVTEVFMEGATNQLDQEVLDDDLVLPIENGELDLAESVSDNILLNIPIKVLTAEEEAGQGFISGNDWQIMTEEEYQAQKA VKKEENSPFAGLQGLFDGDE
Specific function: Unknown
COG id: COG1399
COG function: function code R; Predicted metal-binding, possibly nucleic acid-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20399; Mature: 20399
Theoretical pI: Translated: 3.73; Mature: 3.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLNIQEIRKQSEGLNFEQTLDLVDDLRARNQEILDVKDILAVGKVQYEDRMYFLDYQLS CCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEECCEEEEEEEEEE YTIVLASSRSMEPVELVESYPVTEVFMEGATNQLDQEVLDDDLVLPIENGELDLAESVSD EEEEEECCCCCCHHHHHHCCCHHHHHHHCCCCHHHHHHCCCCCEEEECCCCEEHHHCCCC NILLNIPIKVLTAEEEAGQGFISGNDWQIMTEEEYQAQKAVKKEENSPFAGLQGLFDGDE CEEEECCEEEEEECHHCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKLNIQEIRKQSEGLNFEQTLDLVDDLRARNQEILDVKDILAVGKVQYEDRMYFLDYQLS CCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEECCEEEEEEEEEE YTIVLASSRSMEPVELVESYPVTEVFMEGATNQLDQEVLDDDLVLPIENGELDLAESVSD EEEEEECCCCCCHHHHHHCCCHHHHHHHCCCCHHHHHHCCCCCEEEECCCCEEHHHCCCC NILLNIPIKVLTAEEEAGQGFISGNDWQIMTEEEYQAQKAVKKEENSPFAGLQGLFDGDE CEEEECCEEEEEECHHCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA