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The map label for this gene is yfkH [H]

Identifier: 116516563

GI number: 116516563

Start: 592094

End: 592954

Strand: Direct

Name: yfkH [H]

Synonym: SPD_0570

Alternate gene names: 116516563

Gene position: 592094-592954 (Clockwise)

Preceding gene: 116516836

Following gene: 116515707

Centisome position: 28.94

GC content: 39.26

Gene sequence:

>861_bases
ATGAAAAAGTGGTGGAAAGAGCTGATAGACAAGCCTTTATTAAAAGCTTTTTTGCATTATTATCAAGCATCAGATAGTGA
GTTGACCAGTGTCGCAGTAGCCTACTATTGGTTGATTTCGATTTTCCCCCTGCTTTTGGTGGTGGTCAATATCCTCCCCT
ATTTTCAGATTCCTGTGGGAGAATTTCTGGGCTTTATGAAAGACGTCCTGCCCCCAAGCCTCTATGAAGGTGTGGAAAAA
ATAGCCAGAGAAGTCTTGACGCAACCTTCAACAGGTTTATTGAGTTTTTCTGTTTTATCGGCGTTATGGAGTTTTTCAAA
ATCTATAAATTTCTTGCAAAAAGCTTTTAACAAGGCTTATGGCGTCGAAAAGAGTCGTGGACTTATTTCCCATCAGATGC
TAAGTCTCCTAGTCAGTTTTGGCTTGCAGTTCCTCTTTGCGTTTGCCTTGTTTTTGATCTTATTTGGTCAGATGATTTTG
GCTTTACTTGCTCATTATTGGACAAAAGATGGCATTATCTATCAGGCTTTACAAGGGTTGGCAGGTCCTCTGATTTACGC
CCTCCTCTTTGCTATCTTGGTCATGCTTTATTATTTTCTTCCCAATCTATCTAACAGGAAAATTAGCTATACCCTACCAG
GCAGTGCCTTTGTTCTCTTGGTGATTTTAGGTGTACTAACTCTGTTCTCTAGTTATCTCAATTACTATGTCCATCATTTG
GTGGATGTCCGAATTTTAGGTTCCGTTCTTCTTGTTGTTATGATGTTTTGGTTTATCTTGATTGCTAAAATTGTTATCCT
AGGCGCGGTGATCAATGCCAGTATGCAGAGTTTGAAAGATCAGGTCTTTAAAAAAGACTAA

Upstream 100 bases:

>100_bases
TCTACAACCTCAAAACAGTGTTTTGAGCAGCTTGCGGCTAGCTTTCTAGTTTGCTCTTTGATTTTCATTGAGTATAAGAT
TATAAATGAAGGAGTATGAC

Downstream 100 bases:

>100_bases
CTATTTATCCATTACAAAAGCGCATAGTATCAAGGCTTTATAGAATCTTGATACTATGCGCTTTTGTGCTTTGACAGTTT
TTTGTATAGTTTTTGTCCAA

Product: ribonuclease BN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MKKWWKELIDKPLLKAFLHYYQASDSELTSVAVAYYWLISIFPLLLVVVNILPYFQIPVGEFLGFMKDVLPPSLYEGVEK
IAREVLTQPSTGLLSFSVLSALWSFSKSINFLQKAFNKAYGVEKSRGLISHQMLSLLVSFGLQFLFAFALFLILFGQMIL
ALLAHYWTKDGIIYQALQGLAGPLIYALLFAILVMLYYFLPNLSNRKISYTLPGSAFVLLVILGVLTLFSSYLNYYVHHL
VDVRILGSVLLVVMMFWFILIAKIVILGAVINASMQSLKDQVFKKD

Sequences:

>Translated_286_residues
MKKWWKELIDKPLLKAFLHYYQASDSELTSVAVAYYWLISIFPLLLVVVNILPYFQIPVGEFLGFMKDVLPPSLYEGVEK
IAREVLTQPSTGLLSFSVLSALWSFSKSINFLQKAFNKAYGVEKSRGLISHQMLSLLVSFGLQFLFAFALFLILFGQMIL
ALLAHYWTKDGIIYQALQGLAGPLIYALLFAILVMLYYFLPNLSNRKISYTLPGSAFVLLVILGVLTLFSSYLNYYVHHL
VDVRILGSVLLVVMMFWFILIAKIVILGAVINASMQSLKDQVFKKD
>Mature_286_residues
MKKWWKELIDKPLLKAFLHYYQASDSELTSVAVAYYWLISIFPLLLVVVNILPYFQIPVGEFLGFMKDVLPPSLYEGVEK
IAREVLTQPSTGLLSFSVLSALWSFSKSINFLQKAFNKAYGVEKSRGLISHQMLSLLVSFGLQFLFAFALFLILFGQMIL
ALLAHYWTKDGIIYQALQGLAGPLIYALLFAILVMLYYFLPNLSNRKISYTLPGSAFVLLVILGVLTLFSSYLNYYVHHL
VDVRILGSVLLVVMMFWFILIAKIVILGAVINASMQSLKDQVFKKD

Specific function: Unknown

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: NA

Molecular weight: Translated: 32464; Mature: 32464

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKWWKELIDKPLLKAFLHYYQASDSELTSVAVAYYWLISIFPLLLVVVNILPYFQIPVG
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
EFLGFMKDVLPPSLYEGVEKIAREVLTQPSTGLLSFSVLSALWSFSKSINFLQKAFNKAY
HHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVEKSRGLISHQMLSLLVSFGLQFLFAFALFLILFGQMILALLAHYWTKDGIIYQALQGL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
AGPLIYALLFAILVMLYYFLPNLSNRKISYTLPGSAFVLLVILGVLTLFSSYLNYYVHHL
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDVRILGSVLLVVMMFWFILIAKIVILGAVINASMQSLKDQVFKKD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKWWKELIDKPLLKAFLHYYQASDSELTSVAVAYYWLISIFPLLLVVVNILPYFQIPVG
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
EFLGFMKDVLPPSLYEGVEKIAREVLTQPSTGLLSFSVLSALWSFSKSINFLQKAFNKAY
HHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVEKSRGLISHQMLSLLVSFGLQFLFAFALFLILFGQMILALLAHYWTKDGIIYQALQGL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
AGPLIYALLFAILVMLYYFLPNLSNRKISYTLPGSAFVLLVILGVLTLFSSYLNYYVHHL
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDVRILGSVLLVVMMFWFILIAKIVILGAVINASMQSLKDQVFKKD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377 [H]