Definition Streptococcus pneumoniae D39, complete genome.
Accession NC_008533
Length 2,046,115

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The map label for this gene is 116516371

Identifier: 116516371

GI number: 116516371

Start: 105545

End: 107653

Strand: Direct

Name: 116516371

Synonym: SPD_0107

Alternate gene names: NA

Gene position: 105545-107653 (Clockwise)

Preceding gene: 116517179

Following gene: 116516985

Centisome position: 5.16

GC content: 37.89

Gene sequence:

>2109_bases
ATGAAAAAAATCAGTCATCTTTGTATGTTACTCCTGCTTCTGTGTACCACTTTTTTTGTTTTTAATGTAAACTATACACG
AGAAGTGGTTCGGATTCAAGAAATGGGAAAGACTGTAGATTCTTTGGATTTGTATTTGAAAGATATTAACGAACCTGCAG
CGTCTGTTCTTCGATTTTTTGAGGATGTATCAAAGGAGTATAAAGTCTCCATCATCAAAACAGACAGTGGTGATGAGGTG
GTCAAGTCTGGTGTTTTTGATAAAGATACCTTCCCCTACCAAGAGTTTGGGATTTCTTCTCTTGATTTTACCACAGATGG
TGAAGGAGTCTATAGTAATAAAGAAATTTCCAATAAACTTGGTACGATTCCGACCTTTCTAAAAGCCAAACCTATTCAGC
TTATGACTTTTCAAACCTATATCAAGGATACATCTCGTAGTTTAAATGGTCGCTATACGATAACTTCTACACAAGAGATG
GACAAGGATAGGATTGTACAGAAATGGAGCGATTTTTTCAAGATAGACCAGGCTACCTTGCTAGAGCCGACCTACAAAAG
TGCAGTGGAAGTCATAAATCGAGATTTGCTTTTATCTGCCATTGTTTTTGTCTTGGCTATTTTGCTTCTTGTGTTAGTGA
CAGTGTATCAACCGATGATGGAGATGAAAAGAGTTGGGGTACAAAAATTACTTGGTTTTCAAGATAGGGCTGTTTTAGCT
GATGTTGTAAAAGGCAACCTTTACCTCCTCCTAGGTGGGGCTCTTGTGATCAATCTAGGCGTGTTTTTCTTGCTTGATTA
TAAGCCAAAAGATTTGTTTCCTATGCTGTGGTTGTCTCATTTTTTGCTGTTGCAGCTTTATCTCTTTATCAGTTGGTTGA
CTTACCTCTTAATCCAAAAAATGACAATCAGCTCTCTGCTGAAAGGTTTTTCATCTTTCAAATTTGGTCTTATCTTCAAT
TATGTGATGAAAATAGGGACAACTATTTTACTGACGGCCTTACTGATTGGGGTGGGCAGAAGTTTAGAACAAGAAAACAA
AGAACTTGCTTATCAGCAACAGTGGGTAAGTCAAGGTAATTACCTGACCTTAGAAACCTTCAAACTCAATGATAATCTGT
GGCAAGAAGAGCTAGCAGGGTCAGGGAAATCTACAGATTATTTCTATCGATTTTATCAGGATTTGGTAGAAAAAACGCAG
GCGGGCTATGTGCAGAGTAGCAGTCTTCCTGTAAAAAATTTTGTCCAATCAGAACAGATTCAGCAATATCAGTTAACAGA
TACGGTGGATGTTTACTATGCCAATCGCAATTTTCTAAAGAGCAAGGGATTCAAGCTACCAGATACCGGTATTAAAAAAG
TTATTTTGATGCCAGCAAGTACGAAAGGTGAAGAAGATAAAAATCAGCTCTTGGGGAAGTTAATTGCCTTTCATTCGATG
AAGTATGAAGAGCAGCAAAAACGAACGATAGAGGAGATGGATGTCGAGATTGCCTATTATGAAGGAGATTGGTCATTTTT
CCCATATAGTGATAAGCGAAAGGAAAATCTCTCCAATCCAATTATTAGCTTGGTCAATGATTCTGATATGATGTGGGATG
AGAAAGCCTCCCTGTCAACAACTGGCTTAAATAATCCGATTAAAATTGAAAATACGGTTCAACATCAAAAAGAGATTACA
GAGTTAGTTGAGAAATTGTCAGATGGAAATTATTTAAAATTTTCATCTATTCAAGCCATTCAACAAGAGAAAGTGGATTC
TTATCGAGATGCTGTTCGGAATTTTAACCTACTCTTTGCTTTGTTTGGTCTCCTTAGCATGATGATTTCCTACTTCTTAC
TAGTAACAACTTTCTTATTGAAGCGCAGGGATATCATTACCAAGAAGTTTATGGGGTGGAAACTGGTCGATCGCTACCGT
CCTCTCCTCGTTCTGCTCTTGCTGGGCTATAGTTTCCCTCTTCTAGTCTTGATTTTCTTTGCCCATGCGTTCTTACCACT
TCTACTGTTTGCAGGTTTTACATGTCTGGATATACTATTTGTGCTAGGCTTAGCTTCTAGGATGGAGAAAAGAAGTCTAG
TAGAGTTATTGAAAGGGGGCATCTTATGA

Upstream 100 bases:

>100_bases
CTTCAAATTCCCACCAACGGGAATGGAATATTTCTATGGATTTTAATTAAAATTCTCCCTCCCCTTTTGGAGAGGGAGTT
TCTTCACGGGAGGTATCTCT

Downstream 100 bases:

>100_bases
TTGAGTTGAAAAATATTACCAAAACCATTGGGGGAAAAGTGATTTTGGATAACTTATCTCTCAGGATTGATCAGGGGGAT
TTGGTAGCTATTGTTGGTAA

Product: membrnae protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 702; Mature: 702

Protein sequence:

>702_residues
MKKISHLCMLLLLLCTTFFVFNVNYTREVVRIQEMGKTVDSLDLYLKDINEPAASVLRFFEDVSKEYKVSIIKTDSGDEV
VKSGVFDKDTFPYQEFGISSLDFTTDGEGVYSNKEISNKLGTIPTFLKAKPIQLMTFQTYIKDTSRSLNGRYTITSTQEM
DKDRIVQKWSDFFKIDQATLLEPTYKSAVEVINRDLLLSAIVFVLAILLLVLVTVYQPMMEMKRVGVQKLLGFQDRAVLA
DVVKGNLYLLLGGALVINLGVFFLLDYKPKDLFPMLWLSHFLLLQLYLFISWLTYLLIQKMTISSLLKGFSSFKFGLIFN
YVMKIGTTILLTALLIGVGRSLEQENKELAYQQQWVSQGNYLTLETFKLNDNLWQEELAGSGKSTDYFYRFYQDLVEKTQ
AGYVQSSSLPVKNFVQSEQIQQYQLTDTVDVYYANRNFLKSKGFKLPDTGIKKVILMPASTKGEEDKNQLLGKLIAFHSM
KYEEQQKRTIEEMDVEIAYYEGDWSFFPYSDKRKENLSNPIISLVNDSDMMWDEKASLSTTGLNNPIKIENTVQHQKEIT
ELVEKLSDGNYLKFSSIQAIQQEKVDSYRDAVRNFNLLFALFGLLSMMISYFLLVTTFLLKRRDIITKKFMGWKLVDRYR
PLLVLLLLGYSFPLLVLIFFAHAFLPLLLFAGFTCLDILFVLGLASRMEKRSLVELLKGGIL

Sequences:

>Translated_702_residues
MKKISHLCMLLLLLCTTFFVFNVNYTREVVRIQEMGKTVDSLDLYLKDINEPAASVLRFFEDVSKEYKVSIIKTDSGDEV
VKSGVFDKDTFPYQEFGISSLDFTTDGEGVYSNKEISNKLGTIPTFLKAKPIQLMTFQTYIKDTSRSLNGRYTITSTQEM
DKDRIVQKWSDFFKIDQATLLEPTYKSAVEVINRDLLLSAIVFVLAILLLVLVTVYQPMMEMKRVGVQKLLGFQDRAVLA
DVVKGNLYLLLGGALVINLGVFFLLDYKPKDLFPMLWLSHFLLLQLYLFISWLTYLLIQKMTISSLLKGFSSFKFGLIFN
YVMKIGTTILLTALLIGVGRSLEQENKELAYQQQWVSQGNYLTLETFKLNDNLWQEELAGSGKSTDYFYRFYQDLVEKTQ
AGYVQSSSLPVKNFVQSEQIQQYQLTDTVDVYYANRNFLKSKGFKLPDTGIKKVILMPASTKGEEDKNQLLGKLIAFHSM
KYEEQQKRTIEEMDVEIAYYEGDWSFFPYSDKRKENLSNPIISLVNDSDMMWDEKASLSTTGLNNPIKIENTVQHQKEIT
ELVEKLSDGNYLKFSSIQAIQQEKVDSYRDAVRNFNLLFALFGLLSMMISYFLLVTTFLLKRRDIITKKFMGWKLVDRYR
PLLVLLLLGYSFPLLVLIFFAHAFLPLLLFAGFTCLDILFVLGLASRMEKRSLVELLKGGIL
>Mature_702_residues
MKKISHLCMLLLLLCTTFFVFNVNYTREVVRIQEMGKTVDSLDLYLKDINEPAASVLRFFEDVSKEYKVSIIKTDSGDEV
VKSGVFDKDTFPYQEFGISSLDFTTDGEGVYSNKEISNKLGTIPTFLKAKPIQLMTFQTYIKDTSRSLNGRYTITSTQEM
DKDRIVQKWSDFFKIDQATLLEPTYKSAVEVINRDLLLSAIVFVLAILLLVLVTVYQPMMEMKRVGVQKLLGFQDRAVLA
DVVKGNLYLLLGGALVINLGVFFLLDYKPKDLFPMLWLSHFLLLQLYLFISWLTYLLIQKMTISSLLKGFSSFKFGLIFN
YVMKIGTTILLTALLIGVGRSLEQENKELAYQQQWVSQGNYLTLETFKLNDNLWQEELAGSGKSTDYFYRFYQDLVEKTQ
AGYVQSSSLPVKNFVQSEQIQQYQLTDTVDVYYANRNFLKSKGFKLPDTGIKKVILMPASTKGEEDKNQLLGKLIAFHSM
KYEEQQKRTIEEMDVEIAYYEGDWSFFPYSDKRKENLSNPIISLVNDSDMMWDEKASLSTTGLNNPIKIENTVQHQKEIT
ELVEKLSDGNYLKFSSIQAIQQEKVDSYRDAVRNFNLLFALFGLLSMMISYFLLVTTFLLKRRDIITKKFMGWKLVDRYR
PLLVLLLLGYSFPLLVLIFFAHAFLPLLLFAGFTCLDILFVLGLASRMEKRSLVELLKGGIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 80766; Mature: 80766

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKISHLCMLLLLLCTTFFVFNVNYTREVVRIQEMGKTVDSLDLYLKDINEPAASVLRFF
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHH
EDVSKEYKVSIIKTDSGDEVVKSGVFDKDTFPYQEFGISSLDFTTDGEGVYSNKEISNKL
HHHCHHHEEEEEEECCCHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHH
GTIPTFLKAKPIQLMTFQTYIKDTSRSLNGRYTITSTQEMDKDRIVQKWSDFFKIDQATL
CCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCEEECCHHHCCHHHHHHHHHHHHHCCHHHH
LEPTYKSAVEVINRDLLLSAIVFVLAILLLVLVTVYQPMMEMKRVGVQKLLGFQDRAVLA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
DVVKGNLYLLLGGALVINLGVFFLLDYKPKDLFPMLWLSHFLLLQLYLFISWLTYLLIQK
HHHCCCEEEEEHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MTISSLLKGFSSFKFGLIFNYVMKIGTTILLTALLIGVGRSLEQENKELAYQQQWVSQGN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC
YLTLETFKLNDNLWQEELAGSGKSTDYFYRFYQDLVEKTQAGYVQSSSLPVKNFVQSEQI
EEEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
QQYQLTDTVDVYYANRNFLKSKGFKLPDTGIKKVILMPASTKGEEDKNQLLGKLIAFHSM
HHHCCCCCEEEEECCCHHHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHH
KYEEQQKRTIEEMDVEIAYYEGDWSFFPYSDKRKENLSNPIISLVNDSDMMWDEKASLST
HHHHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHCCCHHHHHCCCCCCCCCCCCCCCC
TGLNNPIKIENTVQHQKEITELVEKLSDGNYLKFSSIQAIQQEKVDSYRDAVRNFNLLFA
CCCCCCEECCHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFGLLSMMISYFLLVTTFLLKRRDIITKKFMGWKLVDRYRPLLVLLLLGYSFPLLVLIFF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AHAFLPLLLFAGFTCLDILFVLGLASRMEKRSLVELLKGGIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKISHLCMLLLLLCTTFFVFNVNYTREVVRIQEMGKTVDSLDLYLKDINEPAASVLRFF
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHH
EDVSKEYKVSIIKTDSGDEVVKSGVFDKDTFPYQEFGISSLDFTTDGEGVYSNKEISNKL
HHHCHHHEEEEEEECCCHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHH
GTIPTFLKAKPIQLMTFQTYIKDTSRSLNGRYTITSTQEMDKDRIVQKWSDFFKIDQATL
CCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCEEECCHHHCCHHHHHHHHHHHHHCCHHHH
LEPTYKSAVEVINRDLLLSAIVFVLAILLLVLVTVYQPMMEMKRVGVQKLLGFQDRAVLA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
DVVKGNLYLLLGGALVINLGVFFLLDYKPKDLFPMLWLSHFLLLQLYLFISWLTYLLIQK
HHHCCCEEEEEHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MTISSLLKGFSSFKFGLIFNYVMKIGTTILLTALLIGVGRSLEQENKELAYQQQWVSQGN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC
YLTLETFKLNDNLWQEELAGSGKSTDYFYRFYQDLVEKTQAGYVQSSSLPVKNFVQSEQI
EEEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
QQYQLTDTVDVYYANRNFLKSKGFKLPDTGIKKVILMPASTKGEEDKNQLLGKLIAFHSM
HHHCCCCCEEEEECCCHHHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHH
KYEEQQKRTIEEMDVEIAYYEGDWSFFPYSDKRKENLSNPIISLVNDSDMMWDEKASLST
HHHHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHCCCHHHHHCCCCCCCCCCCCCCCC
TGLNNPIKIENTVQHQKEITELVEKLSDGNYLKFSSIQAIQQEKVDSYRDAVRNFNLLFA
CCCCCCEECCHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFGLLSMMISYFLLVTTFLLKRRDIITKKFMGWKLVDRYRPLLVLLLLGYSFPLLVLIFF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AHAFLPLLLFAGFTCLDILFVLGLASRMEKRSLVELLKGGIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA