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The map label for this gene is 116516332

Identifier: 116516332

GI number: 116516332

Start: 845358

End: 845675

Strand: Direct

Name: 116516332

Synonym: SPD_0827

Alternate gene names: NA

Gene position: 845358-845675 (Clockwise)

Preceding gene: 116515715

Following gene: 116515519

Centisome position: 41.32

GC content: 44.03

Gene sequence:

>318_bases
ATGGACAAAAAAGAATTATTTGACGCGCTGGATGATTTTTCCCAACAGTTATTGGTAACCTTGGCCGATGTGGAAGCCAT
CAAGAAAAATCTCAAGAGCCTGGTAGAGGAAAATACAGCTCTTCGTTTGGAAAATTCTAAGTTGCGAGAACGCTTGGGTG
AGGTGGAAGCAGATGCTCCTGTCAAGGCCAAGCATGTTCGTGAAAGTGTCCGTCGCATTTACCGTGATGGATTTCACGTA
TGTAATGATTTTTATGGACAACGTCGAGAGCAGGACGAGGAATGTATGTTTTGTGACGAGTTGCTATACAGGGAGTAG

Upstream 100 bases:

>100_bases
GTGGCAAGCTAATGTCAGCTTTCAAAATGCCATGGAATATCTGGTCTTGAAAGAAATATAAACTCAAAAATGAATGATAA
AGAAAGGAAAGGGCTGTTTT

Downstream 100 bases:

>100_bases
GCATGCAGATTCAAAAAAGTTTTAAGGGGCAGTCTCCCTATGGCAAGCTGTATCTAGTGGCAACGCCGATTGGCAATCTA
GATGATATGACCTTTCGAGC

Product: DNA replication intiation control protein YabA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MDKKELFDALDDFSQQLLVTLADVEAIKKNLKSLVEENTALRLENSKLRERLGEVEADAPVKAKHVRESVRRIYRDGFHV
CNDFYGQRREQDEECMFCDELLYRE

Sequences:

>Translated_105_residues
MDKKELFDALDDFSQQLLVTLADVEAIKKNLKSLVEENTALRLENSKLRERLGEVEADAPVKAKHVRESVRRIYRDGFHV
CNDFYGQRREQDEECMFCDELLYRE
>Mature_105_residues
MDKKELFDALDDFSQQLLVTLADVEAIKKNLKSLVEENTALRLENSKLRERLGEVEADAPVKAKHVRESVRRIYRDGFHV
CNDFYGQRREQDEECMFCDELLYRE

Specific function: Involved in initiation control of chromosome replication

COG id: COG4467

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yabA family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YABA_STRP2 (Q04KY8)

Other databases:

- EMBL:   CP000410
- RefSeq:   YP_816310.1
- STRING:   Q04KY8
- EnsemblBacteria:   EBSTRT00000019814
- GeneID:   4442815
- GenomeReviews:   CP000410_GR
- KEGG:   spd:SPD_0827
- eggNOG:   COG4467
- GeneTree:   EBGT00050000028195
- HOGENOM:   HBG514867
- OMA:   VHYGSVR
- ProtClustDB:   PRK13169
- HAMAP:   MF_01159
- InterPro:   IPR010377
- PIRSF:   PIRSF021439

Pfam domain/function: PF06156 DUF972

EC number: NA

Molecular weight: Translated: 12411; Mature: 12411

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKKELFDALDDFSQQLLVTLADVEAIKKNLKSLVEENTALRLENSKLRERLGEVEADAP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
VKAKHVRESVRRIYRDGFHVCNDFYGQRREQDEECMFCDELLYRE
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MDKKELFDALDDFSQQLLVTLADVEAIKKNLKSLVEENTALRLENSKLRERLGEVEADAP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
VKAKHVRESVRRIYRDGFHVCNDFYGQRREQDEECMFCDELLYRE
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA