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The map label for this gene is rsmI [H]

Identifier: 116515519

GI number: 116515519

Start: 845678

End: 846547

Strand: Direct

Name: rsmI [H]

Synonym: SPD_0828

Alternate gene names: 116515519

Gene position: 845678-846547 (Clockwise)

Preceding gene: 116516332

Following gene: 116517217

Centisome position: 41.33

GC content: 43.33

Gene sequence:

>870_bases
ATGCAGATTCAAAAAAGTTTTAAGGGGCAGTCTCCCTATGGCAAGCTGTATCTAGTGGCAACGCCGATTGGCAATCTAGA
TGATATGACCTTTCGAGCTATCCAGACCTTGAAAGAAGTAGATTGGATTGCTGCTGAGGATACGCGCAATACAGGTCTTT
TGCTCAAGCATTTTGACATTTCCACCAAGCAGATCAGTTTTCATGAGCACAATGCCAAGGAAAAAATTCCTGATTTGATT
GGTTTCTTGAAAGCAGGGCAAAGTATTGCTCAGGTCTCTGATGCCGGTTTGCCTAGCATTTCAGACCCTGGTCATGATTT
AGTTAAGGCAGCTATTGAGGAAGAAATTGCAGTTGTGACAGTTCCAGGTGCCTCTGCAGGAATTTCTGCCTTGATTGCCA
GTGGTTTAGCGCCACAGCCACATATCTTTTACGGTTTTTTACCGAGAAAATCAGGTCAGCAGAAGCAATTTTTTGGCTTG
AAAAAAGATTATCCTGAAACACAGATTTTTTATGAATCACCTCATCGTGTAGCAGACACGTTGGAAAATATGTTAGAAGT
CTACGGTGACCGCTCCGTTGTCTTGGTCAGGGAATTGACCAAAATCTATGAAGAATACCAACGAGGTACTATCTCTGAGT
TATTAGAAAGCATTGCTGAAACGCCACTCAAGGGCGAATGTCTTCTCATTGTTGAGGGTGCCAGTCAGGGTGTGGAGGAA
AAGGACGAGGAAGACTTGTTCGTAGAAATTCAAACCCGCATCCAGCAAGGTGTGAAGAAAAACCAAGCTATCAAGGAAGT
CGCTAAGATTTACCAGTGGAATAAAAGTCAGCTCTACGCTGCCTACCACGACTGGGAAGAAAAACAATAA

Upstream 100 bases:

>100_bases
ACCGTGATGGATTTCACGTATGTAATGATTTTTATGGACAACGTCGAGAGCAGGACGAGGAATGTATGTTTTGTGACGAG
TTGCTATACAGGGAGTAGGC

Downstream 100 bases:

>100_bases
AGGGAGACAGGATGTAATAATTCTGTCTGTTTCTGTTTAACTTAATTAGTGATGATAATATAAAGATGTATCACTTGGTA
TAGAAGCTTTGGTATTAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MQIQKSFKGQSPYGKLYLVATPIGNLDDMTFRAIQTLKEVDWIAAEDTRNTGLLLKHFDISTKQISFHEHNAKEKIPDLI
GFLKAGQSIAQVSDAGLPSISDPGHDLVKAAIEEEIAVVTVPGASAGISALIASGLAPQPHIFYGFLPRKSGQQKQFFGL
KKDYPETQIFYESPHRVADTLENMLEVYGDRSVVLVRELTKIYEEYQRGTISELLESIAETPLKGECLLIVEGASQGVEE
KDEEDLFVEIQTRIQQGVKKNQAIKEVAKIYQWNKSQLYAAYHDWEEKQ

Sequences:

>Translated_289_residues
MQIQKSFKGQSPYGKLYLVATPIGNLDDMTFRAIQTLKEVDWIAAEDTRNTGLLLKHFDISTKQISFHEHNAKEKIPDLI
GFLKAGQSIAQVSDAGLPSISDPGHDLVKAAIEEEIAVVTVPGASAGISALIASGLAPQPHIFYGFLPRKSGQQKQFFGL
KKDYPETQIFYESPHRVADTLENMLEVYGDRSVVLVRELTKIYEEYQRGTISELLESIAETPLKGECLLIVEGASQGVEE
KDEEDLFVEIQTRIQQGVKKNQAIKEVAKIYQWNKSQLYAAYHDWEEKQ
>Mature_289_residues
MQIQKSFKGQSPYGKLYLVATPIGNLDDMTFRAIQTLKEVDWIAAEDTRNTGLLLKHFDISTKQISFHEHNAKEKIPDLI
GFLKAGQSIAQVSDAGLPSISDPGHDLVKAAIEEEIAVVTVPGASAGISALIASGLAPQPHIFYGFLPRKSGQQKQFFGL
KKDYPETQIFYESPHRVADTLENMLEVYGDRSVVLVRELTKIYEEYQRGTISELLESIAETPLKGECLLIVEGASQGVEE
KDEEDLFVEIQTRIQQGVKKNQAIKEVAKIYQWNKSQLYAAYHDWEEKQ

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=236, Percent_Identity=47.8813559322034, Blast_Score=201, Evalue=5e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 32399; Mature: 32399

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIQKSFKGQSPYGKLYLVATPIGNLDDMTFRAIQTLKEVDWIAAEDTRNTGLLLKHFDI
CCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECC
STKQISFHEHNAKEKIPDLIGFLKAGQSIAQVSDAGLPSISDPGHDLVKAAIEEEIAVVT
CCCEEEEHHCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCEEEEE
VPGASAGISALIASGLAPQPHIFYGFLPRKSGQQKQFFGLKKDYPETQIFYESPHRVADT
ECCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCEEEECCCHHHHHH
LENMLEVYGDRSVVLVRELTKIYEEYQRGTISELLESIAETPLKGECLLIVEGASQGVEE
HHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCC
KDEEDLFVEIQTRIQQGVKKNQAIKEVAKIYQWNKSQLYAAYHDWEEKQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEHECCCCCCC
>Mature Secondary Structure
MQIQKSFKGQSPYGKLYLVATPIGNLDDMTFRAIQTLKEVDWIAAEDTRNTGLLLKHFDI
CCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECC
STKQISFHEHNAKEKIPDLIGFLKAGQSIAQVSDAGLPSISDPGHDLVKAAIEEEIAVVT
CCCEEEEHHCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCEEEEE
VPGASAGISALIASGLAPQPHIFYGFLPRKSGQQKQFFGLKKDYPETQIFYESPHRVADT
ECCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCEEEECCCHHHHHH
LENMLEVYGDRSVVLVRELTKIYEEYQRGTISELLESIAETPLKGECLLIVEGASQGVEE
HHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCC
KDEEDLFVEIQTRIQQGVKKNQAIKEVAKIYQWNKSQLYAAYHDWEEKQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEHECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11296296 [H]