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The map label for this gene is psr [H]

Identifier: 116516217

GI number: 116516217

Start: 1231280

End: 1232554

Strand: Reverse

Name: psr [H]

Synonym: SPD_1202

Alternate gene names: 116516217

Gene position: 1232554-1231280 (Counterclockwise)

Preceding gene: 116515473

Following gene: 116515753

Centisome position: 60.24

GC content: 41.41

Gene sequence:

>1275_bases
ATGAGTAAAGAAAATCCCTTAAGTCATCATGAGCAGTTGCGTTATGATTATTTGCTAAAAAATATTCACTATCTCAATGA
GAGAGAAAAAAATGAGTTTGCCTATTTGCAAGAAAAGCTAACTCTTGCTAGGGGAAATAGTAGCTCTAGCTTGGAACAAG
AAAGAGAAGAGCAGGTTGACTTACCAAGCTATGCGAACCGGAGTCGCTCACAATCCAAATCACAAGCACTCTCTTTCCCT
CCAAAAAAGAAAAGACGGAAGCTCCGTCTTAAACGAATTTTTATGGTGATTTTTTCACTTTTGGTCTGTGTGGCTTTGGC
CATGGTATTCATGTTTTTGCGTGGTTACCAAGATGCTAGCGCAAAGAAAACTGCTGATGCCCGGGCAGCTCAAGTAGAAG
TCTTTAATGGTCAGGACACTAGAGATGGAGTTAATATTTTAATCATGGGTACTGATGGTCGAATCGGCCAGAACAGTGTT
GAGACACGAACTGACTCTATTATGGTATTAAATGTCGGGGGCTCAGATAAGAAAATGAAGCTAGTCAGTTTCATGCGTGA
TAATTTGGTCTATATAGATGGTTATAGTCAAGTGATTAACGGTAGAAAACAGACAGATAACAAGTTAAACGTAGCCTACG
AGTTAGGAGAACAAGAGGGGCAAAAAGGGGCAGAAATGGTTCGCCAAGTCTTGAAAGATAATTTTGACTTGGACATTAAG
TACTACGCCTTGGTTGATTTCCAGGCCTTTGCCACAGCGATTGACACGCTTTTCCCTGATGGGGTGACGATTGATGCTCA
ATTTTCAACATTGAATGGGCGTCCCCTAACAGAAGCTACAGTCGGAGATGATTTATACGCTACCGAGACTGAGTCTCCAA
CCCAAACCATTAAAGTCGGAAAACAGCAGATGAATGGCTCGACCCTGCTCAATTATGCTCGTTTCCGTGATGATGATGAG
GCGGATTACGGCCGTACAAAAAGACAGCAACAAGTTTTAACAGCAATTTTAGAGCAAATTAAAGATCCCACTAAACTTTT
CACTGGTTCTGAAGCTCTTGGAAAGGTTTTTGCTATGACCTCAACCAACGTACCCTATACTTTCCTCCTAACAAACGGTT
TATCTGTTTTGGATGGAGCAAAAAATGGTATTGAAAAATTGACGATTCCAGAACTGGGTGACTGGGTAGATGCCTATGAT
GTTTATGGAGGCTTGGGCTTGCTGGTTGATCAAAACAAATATCAAACCAAGCTCGCTCAAATGGGCTTGAGATAA

Upstream 100 bases:

>100_bases
TCCACTTTGCCCAAAAAGAATTAGAAGCGATTGGAATCCAGTATAAAATTCTGGGTGCCTATCCTATTTATCCAATATCA
GACCATGGAAAGGAGAGAAG

Downstream 100 bases:

>100_bases
GATAATACTCAATGAAAATCAAAGTGCAAACTAGGAAGCTAGCCGCAGGCTGCTAAAAACACAGTTTTGAGGTTGTAGAT
AAGACTGACGAAGTCAGTTA

Product: Psr protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 423

Protein sequence:

>424_residues
MSKENPLSHHEQLRYDYLLKNIHYLNEREKNEFAYLQEKLTLARGNSSSSLEQEREEQVDLPSYANRSRSQSKSQALSFP
PKKKRRKLRLKRIFMVIFSLLVCVALAMVFMFLRGYQDASAKKTADARAAQVEVFNGQDTRDGVNILIMGTDGRIGQNSV
ETRTDSIMVLNVGGSDKKMKLVSFMRDNLVYIDGYSQVINGRKQTDNKLNVAYELGEQEGQKGAEMVRQVLKDNFDLDIK
YYALVDFQAFATAIDTLFPDGVTIDAQFSTLNGRPLTEATVGDDLYATETESPTQTIKVGKQQMNGSTLLNYARFRDDDE
ADYGRTKRQQQVLTAILEQIKDPTKLFTGSEALGKVFAMTSTNVPYTFLLTNGLSVLDGAKNGIEKLTIPELGDWVDAYD
VYGGLGLLVDQNKYQTKLAQMGLR

Sequences:

>Translated_424_residues
MSKENPLSHHEQLRYDYLLKNIHYLNEREKNEFAYLQEKLTLARGNSSSSLEQEREEQVDLPSYANRSRSQSKSQALSFP
PKKKRRKLRLKRIFMVIFSLLVCVALAMVFMFLRGYQDASAKKTADARAAQVEVFNGQDTRDGVNILIMGTDGRIGQNSV
ETRTDSIMVLNVGGSDKKMKLVSFMRDNLVYIDGYSQVINGRKQTDNKLNVAYELGEQEGQKGAEMVRQVLKDNFDLDIK
YYALVDFQAFATAIDTLFPDGVTIDAQFSTLNGRPLTEATVGDDLYATETESPTQTIKVGKQQMNGSTLLNYARFRDDDE
ADYGRTKRQQQVLTAILEQIKDPTKLFTGSEALGKVFAMTSTNVPYTFLLTNGLSVLDGAKNGIEKLTIPELGDWVDAYD
VYGGLGLLVDQNKYQTKLAQMGLR
>Mature_423_residues
SKENPLSHHEQLRYDYLLKNIHYLNEREKNEFAYLQEKLTLARGNSSSSLEQEREEQVDLPSYANRSRSQSKSQALSFPP
KKKRRKLRLKRIFMVIFSLLVCVALAMVFMFLRGYQDASAKKTADARAAQVEVFNGQDTRDGVNILIMGTDGRIGQNSVE
TRTDSIMVLNVGGSDKKMKLVSFMRDNLVYIDGYSQVINGRKQTDNKLNVAYELGEQEGQKGAEMVRQVLKDNFDLDIKY
YALVDFQAFATAIDTLFPDGVTIDAQFSTLNGRPLTEATVGDDLYATETESPTQTIKVGKQQMNGSTLLNYARFRDDDEA
DYGRTKRQQQVLTAILEQIKDPTKLFTGSEALGKVFAMTSTNVPYTFLLTNGLSVLDGAKNGIEKLTIPELGDWVDAYDV
YGGLGLLVDQNKYQTKLAQMGLR

Specific function: Involved in sarA attenuation. Affects resistance to oxacillin and teicoplanin, as well as the synthesis of virulence factors [H]

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 47733; Mature: 47602

Theoretical pI: Translated: 6.83; Mature: 6.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKENPLSHHEQLRYDYLLKNIHYLNEREKNEFAYLQEKLTLARGNSSSSLEQEREEQVD
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC
LPSYANRSRSQSKSQALSFPPKKKRRKLRLKRIFMVIFSLLVCVALAMVFMFLRGYQDAS
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
AKKTADARAAQVEVFNGQDTRDGVNILIMGTDGRIGQNSVETRTDSIMVLNVGGSDKKMK
CHHHHCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCHHH
LVSFMRDNLVYIDGYSQVINGRKQTDNKLNVAYELGEQEGQKGAEMVRQVLKDNFDLDIK
HHHHHHCCEEEECCHHHHHCCCCCCCCCEEEEEECCHHCCHHHHHHHHHHHHCCCCCEEE
YYALVDFQAFATAIDTLFPDGVTIDAQFSTLNGRPLTEATVGDDLYATETESPTQTIKVG
EEEEEHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCEECCCCCCHHHHHHH
KQQMNGSTLLNYARFRDDDEADYGRTKRQQQVLTAILEQIKDPTKLFTGSEALGKVFAMT
HHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHEEEEE
STNVPYTFLLTNGLSVLDGAKNGIEKLTIPELGDWVDAYDVYGGLGLLVDQNKYQTKLAQ
CCCCCEEEEEECCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEEECCHHHHHHHH
MGLR
HCCC
>Mature Secondary Structure 
SKENPLSHHEQLRYDYLLKNIHYLNEREKNEFAYLQEKLTLARGNSSSSLEQEREEQVD
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC
LPSYANRSRSQSKSQALSFPPKKKRRKLRLKRIFMVIFSLLVCVALAMVFMFLRGYQDAS
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
AKKTADARAAQVEVFNGQDTRDGVNILIMGTDGRIGQNSVETRTDSIMVLNVGGSDKKMK
CHHHHCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCHHH
LVSFMRDNLVYIDGYSQVINGRKQTDNKLNVAYELGEQEGQKGAEMVRQVLKDNFDLDIK
HHHHHHCCEEEECCHHHHHCCCCCCCCCEEEEEECCHHCCHHHHHHHHHHHHCCCCCEEE
YYALVDFQAFATAIDTLFPDGVTIDAQFSTLNGRPLTEATVGDDLYATETESPTQTIKVG
EEEEEHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCEECCCCCCHHHHHHH
KQQMNGSTLLNYARFRDDDEADYGRTKRQQQVLTAILEQIKDPTKLFTGSEALGKVFAMT
HHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHEEEEE
STNVPYTFLLTNGLSVLDGAKNGIEKLTIPELGDWVDAYDVYGGLGLLVDQNKYQTKLAQ
CCCCCEEEEEECCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEEECCHHHHHHHH
MGLR
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12878519 [H]