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The map label for this gene is licD3 [H]

Identifier: 116515753

GI number: 116515753

Start: 1230156

End: 1231001

Strand: Reverse

Name: licD3 [H]

Synonym: SPD_1201

Alternate gene names: 116515753

Gene position: 1231001-1230156 (Counterclockwise)

Preceding gene: 116516217

Following gene: 116516575

Centisome position: 60.16

GC content: 40.66

Gene sequence:

>846_bases
ATGAACAATATGACTGATTTAAAAGCAATTCAGGCTCGTAGTCTGGAGATGGCTGAATATTTTGTGGCCTTTTGTAAAGA
ACATGATTTGCTCTGTTATCTCTGTGGCGGAGGCGCTATTGGTGCCCTTCGAAACAAGGGATTTATTCCTTGGGACGACG
ACCTAGACTTTTTTATGCCTCGTAAAGATTATGAGAAATTAGCAGAATTATGGCCTCGTTATGCAGATGAACGTTATTTC
TTGTCAAAGAGTCACAAGGATTTTGTTGATCGTAATCTTTTTATTACCATTCGTGACAAGAAAACCACCTGTATCAAGCC
TTATCAGCAGGATTTGGATTTGCCACATGGTCTGGCCTTGGATGTTTTGCCTTTGGATTATTATCCGAAAAATCCAGCTG
AGCGGAAAAAACAGGTTCGTTGGGCCTTGATTTATTCACTCTTTTGTGCGCAAACTATTCCAGAAAAGCATGGTGATCTC
ATGAAATGGGGAAGTCGCATTTTACTGGGTTTGACTCCAAAATCTCTCCGTTATCGCATCTGGAAAAAAGCTGAGAAAGA
AATGACTAAGTATGATTTGGCTGATTGTGATGGCATTACAGAATTATGCTCAGGTCCTGGCTACATGAGAAACAAGTACC
CAATCACATCTTTTGAAGACAATCTTTTCTTGCCATTTGAAGGAACAGAGATGCCTATTCCAATCGGCTATGATGTCTAT
CTCAGAACTGCTTTTGGGGATTATATGACGCCTCCACCAGCAGACAAGCAGGTACCGCATCATGATACTGTCATTGCTGA
TATGGATAAGTCTTATACAGAATACAAGGGAGAATATGGTGGCTAA

Upstream 100 bases:

>100_bases
ATAGCTATTTGGATAGTAGTCAGGCTTTGATTTTTTACAGTCTGCAATAGATTTTCACCCCTTGTTTGTGGTATAATGAA
ACGATACGATAGAAAGAATA

Downstream 100 bases:

>100_bases
GAAAAAAATCTTATTTTTTATGTGGTCTTTTTCTCTTGGAGGTGGTGCAGAGAAGATTCTATCAACCATTGTTTCAAATC
TGGATCCAGAAAAGTATGAT

Product: phosphotransferase LicD3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MNNMTDLKAIQARSLEMAEYFVAFCKEHDLLCYLCGGGAIGALRNKGFIPWDDDLDFFMPRKDYEKLAELWPRYADERYF
LSKSHKDFVDRNLFITIRDKKTTCIKPYQQDLDLPHGLALDVLPLDYYPKNPAERKKQVRWALIYSLFCAQTIPEKHGDL
MKWGSRILLGLTPKSLRYRIWKKAEKEMTKYDLADCDGITELCSGPGYMRNKYPITSFEDNLFLPFEGTEMPIPIGYDVY
LRTAFGDYMTPPPADKQVPHHDTVIADMDKSYTEYKGEYGG

Sequences:

>Translated_281_residues
MNNMTDLKAIQARSLEMAEYFVAFCKEHDLLCYLCGGGAIGALRNKGFIPWDDDLDFFMPRKDYEKLAELWPRYADERYF
LSKSHKDFVDRNLFITIRDKKTTCIKPYQQDLDLPHGLALDVLPLDYYPKNPAERKKQVRWALIYSLFCAQTIPEKHGDL
MKWGSRILLGLTPKSLRYRIWKKAEKEMTKYDLADCDGITELCSGPGYMRNKYPITSFEDNLFLPFEGTEMPIPIGYDVY
LRTAFGDYMTPPPADKQVPHHDTVIADMDKSYTEYKGEYGG
>Mature_281_residues
MNNMTDLKAIQARSLEMAEYFVAFCKEHDLLCYLCGGGAIGALRNKGFIPWDDDLDFFMPRKDYEKLAELWPRYADERYF
LSKSHKDFVDRNLFITIRDKKTTCIKPYQQDLDLPHGLALDVLPLDYYPKNPAERKKQVRWALIYSLFCAQTIPEKHGDL
MKWGSRILLGLTPKSLRYRIWKKAEKEMTKYDLADCDGITELCSGPGYMRNKYPITSFEDNLFLPFEGTEMPIPIGYDVY
LRTAFGDYMTPPPADKQVPHHDTVIADMDKSYTEYKGEYGG

Specific function: Transfers phosphorylcholine (ChoP) from choline diphosphonucleoside to the lipopolysaccharide (LPS) [H]

COG id: COG3475

COG function: function code M; LPS biosynthesis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the licD transferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007074 [H]

Pfam domain/function: PF04991 LicD [H]

EC number: NA

Molecular weight: Translated: 32661; Mature: 32661

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNMTDLKAIQARSLEMAEYFVAFCKEHDLLCYLCGGGAIGALRNKGFIPWDDDLDFFMP
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHCCCCCCCCCCCCCCCCC
RKDYEKLAELWPRYADERYFLSKSHKDFVDRNLFITIRDKKTTCIKPYQQDLDLPHGLAL
CHHHHHHHHHHHHHCCCHHHHCCCCHHHHCCEEEEEEECCCCCCCCCHHHHCCCCCCCEE
DVLPLDYYPKNPAERKKQVRWALIYSLFCAQTIPEKHGDLMKWGSRILLGLTPKSLRYRI
EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHCCEEEEECCCHHHHHHH
WKKAEKEMTKYDLADCDGITELCSGPGYMRNKYPITSFEDNLFLPFEGTEMPIPIGYDVY
HHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEE
LRTAFGDYMTPPPADKQVPHHDTVIADMDKSYTEYKGEYGG
EEEHHCCCCCCCCCCCCCCCCCCEEECCCCHHHHCCCCCCC
>Mature Secondary Structure
MNNMTDLKAIQARSLEMAEYFVAFCKEHDLLCYLCGGGAIGALRNKGFIPWDDDLDFFMP
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHCCCCCCCCCCCCCCCCC
RKDYEKLAELWPRYADERYFLSKSHKDFVDRNLFITIRDKKTTCIKPYQQDLDLPHGLAL
CHHHHHHHHHHHHHCCCHHHHCCCCHHHHCCEEEEEEECCCCCCCCCHHHHCCCCCCCEE
DVLPLDYYPKNPAERKKQVRWALIYSLFCAQTIPEKHGDLMKWGSRILLGLTPKSLRYRI
EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHCCEEEEECCCHHHHHHH
WKKAEKEMTKYDLADCDGITELCSGPGYMRNKYPITSFEDNLFLPFEGTEMPIPIGYDVY
HHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEE
LRTAFGDYMTPPPADKQVPHHDTVIADMDKSYTEYKGEYGG
EEEHHCCCCCCCCCCCCCCCCCCEEECCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2479481; 7542800; 10632893 [H]