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The map label for this gene is pepA [H]

Identifier: 116516201

GI number: 116516201

Start: 1660980

End: 1662044

Strand: Reverse

Name: pepA [H]

Synonym: SPD_1647

Alternate gene names: 116516201

Gene position: 1662044-1660980 (Counterclockwise)

Preceding gene: 116516197

Following gene: 116516799

Centisome position: 81.23

GC content: 46.01

Gene sequence:

>1065_bases
ATGACAACATTATTTTCAAAAATTAAAGAAGTAACAGAACTTGCTGCAGTCTCAGGTCATGAAGCGCCTGTCCGTGCTTA
TCTTCGTGAAAAGTTGACACCGCATGTGGATGAAGTGGTGACAGATGGCTTGGGTGGTATTTTTGGTATCAAACATTCAG
AAGCTGTGGATGCACCGCGCGTCTTGGTCGCTTCTCATATGGACGAAGTTGGTTTTATGGTCAGCGAAATCAAGCCAGAT
GGTACCTTCCGTGTCGTAGAAATCGGTGGCTGGAACCCCATGGTGGTTAGCAGCCAACGTTTCAAACTCTTGACTCGTGA
TGGTCATGAAATTCCTGTGATTTCAGGTTCTGTTCCTCCGCATTTGACTCGTGGAAAGGGGGGACCAACCATGCCAGCCA
TTGCCGATATCGTTTTTGATGGTGGTTTTGCGGACAAGGCTGAGGCAGAAAGTTTTGGCATCCGTCCTGGTGATACCATC
GTACCAGATAGTTCTGCAATTTTGACAGCCAATGAAAAAAATATCATCTCAAAAGCTTGGGATAACCGCTACGGTGTCCT
CATGGTAAGCGAGCTAGCTGAAGCTTTATCGGGTCAAAAACTCGGCAATGAACTCTATCTGGGTTCTAACGTCCAAGAAG
AAGTTGGTCTGCGTGGCGCTCATACCTCTACAACCAAGTTTGACCCAGAAGTCTTCCTCGCAGTTGATTGCTCACCAGCA
GGTGATGTCTACGGTGGTCAAGGCAAGATTGGAGATGGAACCTTGATTCGTTTCTATGATCCAGGTCACTTGCTTCTCCC
AGGGATGAAGGATTTTCTTTTGACAACGGCTGAAGAAGCTGGTATCAAGTACCAATACTACTGTGGTAAAGGCGGAACAG
ATGCAGGTGCAGCTCATCTGAAAAATGGTGGTGTCCCATCAACAACTATCGGTGTCTGCGCTCGTTATATCCATTCTCAC
CAAACCCTCTATGCAATGGATGACTTCCTAGAAGCGCAAGCTTTCTTACAAGCCTTGGTGAAGAAATTGGATCGTTCAAC
GGTTGATTTGATTAAACATTATTAA

Upstream 100 bases:

>100_bases
AAGATAGAGCAGGACTAAGATACTAACTTAGAAATCCACCTTCCCACTATCCTTCTCCTATAAAAAGTGGTAAAATGGAT
GAAAGAAAGAAGGAACTGAA

Downstream 100 bases:

>100_bases
ACCATAAGGGAGGTGGTAGGGATGGCAGAACCAAACCTAGAAAGCCTTATAAAAGATCTTTACAATCATGCTCGACATGA
TTTGAGTGAAGATTTAGTTG

Product: glutamyl aminopeptidase PepA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 353

Protein sequence:

>354_residues
MTTLFSKIKEVTELAAVSGHEAPVRAYLREKLTPHVDEVVTDGLGGIFGIKHSEAVDAPRVLVASHMDEVGFMVSEIKPD
GTFRVVEIGGWNPMVVSSQRFKLLTRDGHEIPVISGSVPPHLTRGKGGPTMPAIADIVFDGGFADKAEAESFGIRPGDTI
VPDSSAILTANEKNIISKAWDNRYGVLMVSELAEALSGQKLGNELYLGSNVQEEVGLRGAHTSTTKFDPEVFLAVDCSPA
GDVYGGQGKIGDGTLIRFYDPGHLLLPGMKDFLLTTAEEAGIKYQYYCGKGGTDAGAAHLKNGGVPSTTIGVCARYIHSH
QTLYAMDDFLEAQAFLQALVKKLDRSTVDLIKHY

Sequences:

>Translated_354_residues
MTTLFSKIKEVTELAAVSGHEAPVRAYLREKLTPHVDEVVTDGLGGIFGIKHSEAVDAPRVLVASHMDEVGFMVSEIKPD
GTFRVVEIGGWNPMVVSSQRFKLLTRDGHEIPVISGSVPPHLTRGKGGPTMPAIADIVFDGGFADKAEAESFGIRPGDTI
VPDSSAILTANEKNIISKAWDNRYGVLMVSELAEALSGQKLGNELYLGSNVQEEVGLRGAHTSTTKFDPEVFLAVDCSPA
GDVYGGQGKIGDGTLIRFYDPGHLLLPGMKDFLLTTAEEAGIKYQYYCGKGGTDAGAAHLKNGGVPSTTIGVCARYIHSH
QTLYAMDDFLEAQAFLQALVKKLDRSTVDLIKHY
>Mature_353_residues
TTLFSKIKEVTELAAVSGHEAPVRAYLREKLTPHVDEVVTDGLGGIFGIKHSEAVDAPRVLVASHMDEVGFMVSEIKPDG
TFRVVEIGGWNPMVVSSQRFKLLTRDGHEIPVISGSVPPHLTRGKGGPTMPAIADIVFDGGFADKAEAESFGIRPGDTIV
PDSSAILTANEKNIISKAWDNRYGVLMVSELAEALSGQKLGNELYLGSNVQEEVGLRGAHTSTTKFDPEVFLAVDCSPAG
DVYGGQGKIGDGTLIRFYDPGHLLLPGMKDFLLTTAEEAGIKYQYYCGKGGTDAGAAHLKNGGVPSTTIGVCARYIHSHQ
TLYAMDDFLEAQAFLQALVKKLDRSTVDLIKHY

Specific function: Unknown

COG id: COG1363

COG function: function code G; Cellulase M and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M42 family [H]

Homologues:

Organism=Escherichia coli, GI1790332, Length=353, Percent_Identity=30.5949008498584, Blast_Score=163, Evalue=2e-41,
Organism=Escherichia coli, GI1788727, Length=349, Percent_Identity=31.2320916905444, Blast_Score=155, Evalue=4e-39,
Organism=Escherichia coli, GI87082417, Length=351, Percent_Identity=28.4900284900285, Blast_Score=124, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017538
- InterPro:   IPR008007 [H]

Pfam domain/function: PF05343 Peptidase_M42 [H]

EC number: =3.4.11.7 [H]

Molecular weight: Translated: 38020; Mature: 37888

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLFSKIKEVTELAAVSGHEAPVRAYLREKLTPHVDEVVTDGLGGIFGIKHSEAVDAPR
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHCCCCCEECCCCCCCCCCCH
VLVASHMDEVGFMVSEIKPDGTFRVVEIGGWNPMVVSSQRFKLLTRDGHEIPVISGSVPP
HHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEECCCCEEEEECCCCCCCEEECCCCC
HLTRGKGGPTMPAIADIVFDGGFADKAEAESFGIRPGDTIVPDSSAILTANEKNIISKAW
CCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHC
DNRYGVLMVSELAEALSGQKLGNELYLGSNVQEEVGLRGAHTSTTKFDPEVFLAVDCSPA
CCCCCEEEHHHHHHHHCCHHCCCEEEECCCCHHHHCCCCCCCCCCCCCCEEEEEEECCCC
GDVYGGQGKIGDGTLIRFYDPGHLLLPGMKDFLLTTAEEAGIKYQYYCGKGGTDAGAAHL
CCCCCCCCCCCCCCEEEEECCCCEECCCHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHH
KNGGVPSTTIGVCARYIHSHQTLYAMDDFLEAQAFLQALVKKLDRSTVDLIKHY
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCC
>Mature Secondary Structure 
TTLFSKIKEVTELAAVSGHEAPVRAYLREKLTPHVDEVVTDGLGGIFGIKHSEAVDAPR
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHCCCCCEECCCCCCCCCCCH
VLVASHMDEVGFMVSEIKPDGTFRVVEIGGWNPMVVSSQRFKLLTRDGHEIPVISGSVPP
HHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEECCCCEEEEECCCCCCCEEECCCCC
HLTRGKGGPTMPAIADIVFDGGFADKAEAESFGIRPGDTIVPDSSAILTANEKNIISKAW
CCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHC
DNRYGVLMVSELAEALSGQKLGNELYLGSNVQEEVGLRGAHTSTTKFDPEVFLAVDCSPA
CCCCCEEEHHHHHHHHCCHHCCCEEEECCCCHHHHCCCCCCCCCCCCCCEEEEEEECCCC
GDVYGGQGKIGDGTLIRFYDPGHLLLPGMKDFLLTTAEEAGIKYQYYCGKGGTDAGAAHL
CCCCCCCCCCCCCCEEEEECCCCEECCCHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHH
KNGGVPSTTIGVCARYIHSHQTLYAMDDFLEAQAFLQALVKKLDRSTVDLIKHY
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8535515 [H]