| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is 116516799
Identifier: 116516799
GI number: 116516799
Start: 1660662
End: 1660958
Strand: Reverse
Name: 116516799
Synonym: SPD_1646
Alternate gene names: NA
Gene position: 1660958-1660662 (Counterclockwise)
Preceding gene: 116516201
Following gene: 116516067
Centisome position: 81.18
GC content: 42.42
Gene sequence:
>297_bases ATGGCAGAACCAAACCTAGAAAGCCTTATAAAAGATCTTTACAATCATGCTCGACATGATTTGAGTGAAGATTTAGTTGC TGCTCTCCTAGAGACTGCTAAAAAACTGCCTACTACAAATGAGCAATTGCAGGCAGTTCGTCTCTCAGGCCTGGTCAATC GTGAATTGCTCCTAAATCCCAAACATCCAGCACCTGAGTTGCTCAACTTGGCTCGCTTTATCAAAAGAGAAGAAGCCAAG TACAGAGGAACTGCGACTTCTGCGCTTATGTATGAGGAACTCTTTAAAATGCTTTGA
Upstream 100 bases:
>100_bases CCTAGAAGCGCAAGCTTTCTTACAAGCCTTGGTGAAGAAATTGGATCGTTCAACGGTTGATTTGATTAAACATTATTAAA CCATAAGGGAGGTGGTAGGG
Downstream 100 bases:
>100_bases TTCCATTGTGGATCAAAGCATTTTTTGTAAGATCTATCTCGTGAGCGTTCAAATAGTAGTAACAAGGAATCATGAGAAGT CAGCCGAGCCCATAGTAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MAEPNLESLIKDLYNHARHDLSEDLVAALLETAKKLPTTNEQLQAVRLSGLVNRELLLNPKHPAPELLNLARFIKREEAK YRGTATSALMYEELFKML
Sequences:
>Translated_98_residues MAEPNLESLIKDLYNHARHDLSEDLVAALLETAKKLPTTNEQLQAVRLSGLVNRELLLNPKHPAPELLNLARFIKREEAK YRGTATSALMYEELFKML >Mature_97_residues AEPNLESLIKDLYNHARHDLSEDLVAALLETAKKLPTTNEQLQAVRLSGLVNRELLLNPKHPAPELLNLARFIKREEAKY RGTATSALMYEELFKML
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11170; Mature: 11039
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEPNLESLIKDLYNHARHDLSEDLVAALLETAKKLPTTNEQLQAVRLSGLVNRELLLNP CCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC KHPAPELLNLARFIKREEAKYRGTATSALMYEELFKML CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC >Mature Secondary Structure AEPNLESLIKDLYNHARHDLSEDLVAALLETAKKLPTTNEQLQAVRLSGLVNRELLLNP CCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC KHPAPELLNLARFIKREEAKYRGTATSALMYEELFKML CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA