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The map label for this gene is yidD [C]

Identifier: 116516197

GI number: 116516197

Start: 1667509

End: 1667751

Strand: Reverse

Name: yidD [C]

Synonym: SPD_1653

Alternate gene names: 116516197

Gene position: 1667751-1667509 (Counterclockwise)

Preceding gene: 116515785

Following gene: 116516201

Centisome position: 81.51

GC content: 43.62

Gene sequence:

>243_bases
ATGAAACGAATTTTAATAGCGCTTGTGCGCTTTTACCAACGTTTTATCTCACCAGTCTTTCCACCCTCTTGTCGCTTTGA
GCTGACTTGTTCCAACTACATGATTCAGGCTATTGAAAAACATGGTTTTAAGGGGGTATTGATGGGCTTGGCTCGGATTT
TACGTTGTCATCCCTGGTCGAAAACAGGTAAGGACCCCGTTCCAGACCACTTTTCCCTTAAACGAAATCAAGAAGGGGAA
TGA

Upstream 100 bases:

>100_bases
TCGGACACCTAGACTTGACAGGACTCCGTCCAGGAGAATCCCGTCGTCTTAATAAAAAAGAAATCAGCCAACTACACACC
ATGGCTGTAACTAAGAAATA

Downstream 100 bases:

>100_bases
GGTGGGGTAAATAGATTTCAAAATGATAAAAACGCATCCTATCAGGTTTGAGTGAACTTGATAGGATGCGTTTTAGAATG
TCAAAATTTTATACTCTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MKRILIALVRFYQRFISPVFPPSCRFELTCSNYMIQAIEKHGFKGVLMGLARILRCHPWSKTGKDPVPDHFSLKRNQEGE

Sequences:

>Translated_80_residues
MKRILIALVRFYQRFISPVFPPSCRFELTCSNYMIQAIEKHGFKGVLMGLARILRCHPWSKTGKDPVPDHFSLKRNQEGE
>Mature_80_residues
MKRILIALVRFYQRFISPVFPPSCRFELTCSNYMIQAIEKHGFKGVLMGLARILRCHPWSKTGKDPVPDHFSLKRNQEGE

Specific function: Unknown

COG id: COG0759

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0161 family

Homologues:

Organism=Escherichia coli, GI87082322, Length=68, Percent_Identity=51.4705882352941, Blast_Score=75, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1653_STRP2 (Q04IT5)

Other databases:

- EMBL:   CP000410
- RefSeq:   YP_817103.1
- STRING:   Q04IT5
- EnsemblBacteria:   EBSTRT00000019134
- GeneID:   4441456
- GenomeReviews:   CP000410_GR
- KEGG:   spd:SPD_1653
- eggNOG:   COG0759
- GeneTree:   EBGT00050000027872
- HOGENOM:   HBG634291
- OMA:   HPERYED
- ProtClustDB:   PRK00041
- HAMAP:   MF_00386
- InterPro:   IPR002696
- ProDom:   PD004225
- TIGRFAMs:   TIGR00278

Pfam domain/function: PF01809 DUF37

EC number: NA

Molecular weight: Translated: 9336; Mature: 9336

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRILIALVRFYQRFISPVFPPSCRFELTCSNYMIQAIEKHGFKGVLMGLARILRCHPWS
CHHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
KTGKDPVPDHFSLKRNQEGE
CCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKRILIALVRFYQRFISPVFPPSCRFELTCSNYMIQAIEKHGFKGVLMGLARILRCHPWS
CHHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
KTGKDPVPDHFSLKRNQEGE
CCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA