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The map label for this gene is ywbN [H]

Identifier: 116516026

GI number: 116516026

Start: 1184993

End: 1185997

Strand: Reverse

Name: ywbN [H]

Synonym: SPD_1156

Alternate gene names: 116516026

Gene position: 1185997-1184993 (Counterclockwise)

Preceding gene: 116516847

Following gene: 116516672

Centisome position: 57.96

GC content: 42.79

Gene sequence:

>1005_bases
ATGCAAAAGAATATCTATTTTGTTGTCTTGGACCTGCATACGACGGATAGAGATAAAATTATCCAGCTATTCAAGGATTG
GACGGATTATAGTGCCAAGTTGGTCGAGGGGGAATTGGTTAAAAAAGATGGACAGAATGCTCTCTTTCCTCCGAGCGATA
CTGGTGAGACAGTTGGGCTCAATCCTCATCGTTTGACGCTGACTTTTGGTGTATCTGCAAGTTTCTTGAAAAGGATGAAC
TTGGAAAACAAGCGCCCTCGACTGTTCAGGGATTTACCTCTATTTCCTAAGGAGCAATTACGTGAAAAATATACTGGTGG
AGATATTGTGATTCATGCTTGTGCAGATGATGAGCAAATTGCCTTTCACGCTATTCGCAATCTCATCCGTAAGGGGAGAA
ATGCGGTGCCCCTTCGTTGGAGTCAGTCTGGATTTGCAGCTATCGGGGATCGAATGGAGACTCCGTGGAACCTCTTTGGT
TTTAAGGATGGAACAGCAAATCCAACCAAGGAGCAAGACTTTGACCGCGTTATCTGGGCTGATAGTAAGGACTGGATGGA
AAATGGTTCTTATATGGCAGTTCGTCGGATTCAGATGTTTTTAGAGACCTGGGACCGCACTAGTCTCGAAGAACAAGAAA
ATACCTTTGGTCGTTACAAGGAAAGCGGTGCCCCCTTTGGTAAGAAAAATGAGTTTGATGAAGTGGATTTGAGTCTCTTA
CCTGATGATTCGCATGTTTGTTTGGCCAAAGAAGTGGATAAGCCACTTTTACGTCGTTCTTATTCTTACTCAGATGGCAT
TGATGAAAAGACTGGTCAGTTTGATACGGGATTGCTCTTCATTTCTTTCCAGAAGGATCCTGATAACTTTGTTAAGGTTC
AAACTAACCTAGGTGCTACTGATAAGATGAATGAATACATCACTCACATAGGTAGTGGACTTTTTACTTGCTTTGGTGGT
GTGGAGAAAGGAGGCTACATTGGTCAGAAATTATTGGAAGGCTAA

Upstream 100 bases:

>100_bases
CGCGTCTAAAAATAAAATCTCAATTCAAGAAGACAAGAAAGCGCTTTAAAACCAGTAGACCTTTTCATAAGGTTCGCTTG
ATGTACCAAATAGTACGCCC

Downstream 100 bases:

>100_bases
AAGCTGGTTACTAGTTTTAGCTTTGTCATTTTTAATTCTTTCCCCAGCAGGTGCCCAAGAAAGCTTGAGTTTTTTCTTTG
TGAAAATCACAGATGCATCC

Product: Dyp-type peroxidase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MQKNIYFVVLDLHTTDRDKIIQLFKDWTDYSAKLVEGELVKKDGQNALFPPSDTGETVGLNPHRLTLTFGVSASFLKRMN
LENKRPRLFRDLPLFPKEQLREKYTGGDIVIHACADDEQIAFHAIRNLIRKGRNAVPLRWSQSGFAAIGDRMETPWNLFG
FKDGTANPTKEQDFDRVIWADSKDWMENGSYMAVRRIQMFLETWDRTSLEEQENTFGRYKESGAPFGKKNEFDEVDLSLL
PDDSHVCLAKEVDKPLLRRSYSYSDGIDEKTGQFDTGLLFISFQKDPDNFVKVQTNLGATDKMNEYITHIGSGLFTCFGG
VEKGGYIGQKLLEG

Sequences:

>Translated_334_residues
MQKNIYFVVLDLHTTDRDKIIQLFKDWTDYSAKLVEGELVKKDGQNALFPPSDTGETVGLNPHRLTLTFGVSASFLKRMN
LENKRPRLFRDLPLFPKEQLREKYTGGDIVIHACADDEQIAFHAIRNLIRKGRNAVPLRWSQSGFAAIGDRMETPWNLFG
FKDGTANPTKEQDFDRVIWADSKDWMENGSYMAVRRIQMFLETWDRTSLEEQENTFGRYKESGAPFGKKNEFDEVDLSLL
PDDSHVCLAKEVDKPLLRRSYSYSDGIDEKTGQFDTGLLFISFQKDPDNFVKVQTNLGATDKMNEYITHIGSGLFTCFGG
VEKGGYIGQKLLEG
>Mature_334_residues
MQKNIYFVVLDLHTTDRDKIIQLFKDWTDYSAKLVEGELVKKDGQNALFPPSDTGETVGLNPHRLTLTFGVSASFLKRMN
LENKRPRLFRDLPLFPKEQLREKYTGGDIVIHACADDEQIAFHAIRNLIRKGRNAVPLRWSQSGFAAIGDRMETPWNLFG
FKDGTANPTKEQDFDRVIWADSKDWMENGSYMAVRRIQMFLETWDRTSLEEQENTFGRYKESGAPFGKKNEFDEVDLSLL
PDDSHVCLAKEVDKPLLRRSYSYSDGIDEKTGQFDTGLLFISFQKDPDNFVKVQTNLGATDKMNEYITHIGSGLFTCFGG
VEKGGYIGQKLLEG

Specific function: Unknown

COG id: COG2837

COG function: function code P; Predicted iron-dependent peroxidase

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DyP-type peroxidase family [H]

Homologues:

Organism=Escherichia coli, GI1787255, Length=356, Percent_Identity=36.2359550561798, Blast_Score=197, Evalue=1e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR006314
- InterPro:   IPR006313
- InterPro:   IPR006311
- InterPro:   IPR019546 [H]

Pfam domain/function: PF04261 Dyp_perox; PF10518 TAT_signal [H]

EC number: NA

Molecular weight: Translated: 38137; Mature: 38137

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKNIYFVVLDLHTTDRDKIIQLFKDWTDYSAKLVEGELVKKDGQNALFPPSDTGETVGL
CCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCEECC
NPHRLTLTFGVSASFLKRMNLENKRPRLFRDLPLFPKEQLREKYTGGDIVIHACADDEQI
CCEEEEEEECCCHHHHHHHCCCCCCCCHHHCCCCCCHHHHHHHCCCCCEEEEECCCCCHH
AFHAIRNLIRKGRNAVPLRWSQSGFAAIGDRMETPWNLFGFKDGTANPTKEQDFDRVIWA
HHHHHHHHHHCCCCCCCEEECCCCHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEC
DSKDWMENGSYMAVRRIQMFLETWDRTSLEEQENTFGRYKESGAPFGKKNEFDEVDLSLL
CCHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEC
PDDSHVCLAKEVDKPLLRRSYSYSDGIDEKTGQFDTGLLFISFQKDPDNFVKVQTNLGAT
CCCCCEEEHHHHCHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCC
DKMNEYITHIGSGLFTCFGGVEKGGYIGQKLLEG
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC
>Mature Secondary Structure
MQKNIYFVVLDLHTTDRDKIIQLFKDWTDYSAKLVEGELVKKDGQNALFPPSDTGETVGL
CCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCEECC
NPHRLTLTFGVSASFLKRMNLENKRPRLFRDLPLFPKEQLREKYTGGDIVIHACADDEQI
CCEEEEEEECCCHHHHHHHCCCCCCCCHHHCCCCCCHHHHHHHCCCCCEEEEECCCCCHH
AFHAIRNLIRKGRNAVPLRWSQSGFAAIGDRMETPWNLFGFKDGTANPTKEQDFDRVIWA
HHHHHHHHHHCCCCCCCEEECCCCHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEC
DSKDWMENGSYMAVRRIQMFLETWDRTSLEEQENTFGRYKESGAPFGKKNEFDEVDLSLL
CCHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEC
PDDSHVCLAKEVDKPLLRRSYSYSDGIDEKTGQFDTGLLFISFQKDPDNFVKVQTNLGAT
CCCCCEEEHHHHCHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCC
DKMNEYITHIGSGLFTCFGGVEKGGYIGQKLLEG
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]