Click here to switch to the map view.

The map label for this gene is 116516847

Identifier: 116516847

GI number: 116516847

Start: 1186049

End: 1186315

Strand: Reverse

Name: 116516847

Synonym: SPD_1157

Alternate gene names: NA

Gene position: 1186315-1186049 (Counterclockwise)

Preceding gene: 116515897

Following gene: 116516026

Centisome position: 57.98

GC content: 41.95

Gene sequence:

>267_bases
ATGACAGTTGAGGAAGAGAAAGCCTTTCTTGCCCGTCATTTGAAGGCTACAGAGGCAGGAGAATTTGTTACAATTGATGC
CTTATTTCAGGCTTATAAAAAGGAGTTAGGTCGTTCCTACACACGTGATGCCTTCTATCAACTGTTGAAGCGCCATGGTT
GGCGAAATATTACACCACGTCCAGAACATCCTAGGAAAGCAGACGCTCAAACCATTGTCGCGTCTAAAAATAAAATCTCA
ATTCAAGAAGACAAGAAAGCGCTTTAA

Upstream 100 bases:

>100_bases
CTGTAATCAAACAACGATTTAGCGAAATGTAAAAAAATATGAGGAGTTCGGACTCGACTCTCTCCTTCAAGAAACACGTG
GTGGTCGTAACCATGCATAT

Downstream 100 bases:

>100_bases
AACCAGTAGACCTTTTCATAAGGTTCGCTTGATGTACCAAATAGTACGCCCATGCAAAAGAATATCTATTTTGTTGTCTT
GGACCTGCATACGACGGATA

Product: hypothetical protein

Products: NA

Alternate protein names: Transposase ISSpnII

Number of amino acids: Translated: 88; Mature: 87

Protein sequence:

>88_residues
MTVEEEKAFLARHLKATEAGEFVTIDALFQAYKKELGRSYTRDAFYQLLKRHGWRNITPRPEHPRKADAQTIVASKNKIS
IQEDKKAL

Sequences:

>Translated_88_residues
MTVEEEKAFLARHLKATEAGEFVTIDALFQAYKKELGRSYTRDAFYQLLKRHGWRNITPRPEHPRKADAQTIVASKNKIS
IQEDKKAL
>Mature_87_residues
TVEEEKAFLARHLKATEAGEFVTIDALFQAYKKELGRSYTRDAFYQLLKRHGWRNITPRPEHPRKADAQTIVASKNKISI
QEDKKAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10202; Mature: 10071

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVEEEKAFLARHLKATEAGEFVTIDALFQAYKKELGRSYTRDAFYQLLKRHGWRNITPR
CCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCC
PEHPRKADAQTIVASKNKISIQEDKKAL
CCCCCCCCHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TVEEEKAFLARHLKATEAGEFVTIDALFQAYKKELGRSYTRDAFYQLLKRHGWRNITPR
CCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCC
PEHPRKADAQTIVASKNKISIQEDKKAL
CCCCCCCCHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA