Definition Streptococcus pneumoniae D39, complete genome.
Accession NC_008533
Length 2,046,115

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The map label for this gene is 116516672

Identifier: 116516672

GI number: 116516672

Start: 1184440

End: 1185018

Strand: Reverse

Name: 116516672

Synonym: SPD_1155

Alternate gene names: NA

Gene position: 1185018-1184440 (Counterclockwise)

Preceding gene: 116516026

Following gene: 116516999

Centisome position: 57.92

GC content: 39.38

Gene sequence:

>579_bases
TTGGTCAGAAATTATTGGAAGGCTAAAAGCTGGTTACTAGTTTTAGCTTTGTCATTTTTAATTCTTTCCCCAGCAGGTGC
CCAAGAAAGCTTGAGTTTTTTCTTTGTGAAAATCACAGATGCATCCAAAACGGTTAAAAATGGTGGTCAGACTGAGACCC
AGAAACTCGTTACGAAGATGGCATCAGACTTCGAAAGAGTAGAAAATAAGGATTCTGAGGTTGGTAAGATTGTTAAGGAA
AAGTTAGCTCTATCTGGAGATATTACTGAAGCCAAACTCACCGAAATTTCCTCAGCTCTATTAGCTTTTGAAAAAGAACA
AAATCCTGTTGACCTAGATGCGGAAAAGGAAAAATTGGTAAACCGTCTAAGTCCTCGTTTTGAAACCTTAGAACAGGCCA
TTGCCTCCAAAGATTTGGAAAAAGTCCGAGAAGCTTTTAAGAAAATGAATTCCACTTGGACCATCAATGAAAGTGTGGTT
CGTGACAATAGTACAGCTCATTATGGACGTGTTGAAACAGCTATTTCCTTCCTGCCTAGTAGCATGGAAACCGAACCTAC
AGATGAGTCTGGAACATGA

Upstream 100 bases:

>100_bases
CAAACTAACCTAGGTGCTACTGATAAGATGAATGAATACATCACTCACATAGGTAGTGGACTTTTTACTTGCTTTGGTGG
TGTGGAGAAAGGAGGCTACA

Downstream 100 bases:

>100_bases
AAACAGCAGTTGATTTCAAGAAACAAAAAAGAACAGCCGAAACTGTTCTCTTATCATTATTTGAGACCGTATTTTTTGTT
GAAACGATCCACGCGTCCAT

Product: hypothetical protein

Products: NA

Alternate protein names: Permease; FTR1 Family Iron Permease; Fe2+/Pb2+ Permease

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MVRNYWKAKSWLLVLALSFLILSPAGAQESLSFFFVKITDASKTVKNGGQTETQKLVTKMASDFERVENKDSEVGKIVKE
KLALSGDITEAKLTEISSALLAFEKEQNPVDLDAEKEKLVNRLSPRFETLEQAIASKDLEKVREAFKKMNSTWTINESVV
RDNSTAHYGRVETAISFLPSSMETEPTDESGT

Sequences:

>Translated_192_residues
MVRNYWKAKSWLLVLALSFLILSPAGAQESLSFFFVKITDASKTVKNGGQTETQKLVTKMASDFERVENKDSEVGKIVKE
KLALSGDITEAKLTEISSALLAFEKEQNPVDLDAEKEKLVNRLSPRFETLEQAIASKDLEKVREAFKKMNSTWTINESVV
RDNSTAHYGRVETAISFLPSSMETEPTDESGT
>Mature_192_residues
MVRNYWKAKSWLLVLALSFLILSPAGAQESLSFFFVKITDASKTVKNGGQTETQKLVTKMASDFERVENKDSEVGKIVKE
KLALSGDITEAKLTEISSALLAFEKEQNPVDLDAEKEKLVNRLSPRFETLEQAIASKDLEKVREAFKKMNSTWTINESVV
RDNSTAHYGRVETAISFLPSSMETEPTDESGT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21442; Mature: 21442

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRNYWKAKSWLLVLALSFLILSPAGAQESLSFFFVKITDASKTVKNGGQTETQKLVTKM
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHHCCCCHHHHHHHHHH
ASDFERVENKDSEVGKIVKEKLALSGDITEAKLTEISSALLAFEKEQNPVDLDAEKEKLV
HHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
NRLSPRFETLEQAIASKDLEKVREAFKKMNSTWTINESVVRDNSTAHYGRVETAISFLPS
HHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHHHHHHCCC
SMETEPTDESGT
CCCCCCCCCCCC
>Mature Secondary Structure
MVRNYWKAKSWLLVLALSFLILSPAGAQESLSFFFVKITDASKTVKNGGQTETQKLVTKM
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHHCCCCHHHHHHHHHH
ASDFERVENKDSEVGKIVKEKLALSGDITEAKLTEISSALLAFEKEQNPVDLDAEKEKLV
HHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
NRLSPRFETLEQAIASKDLEKVREAFKKMNSTWTINESVVRDNSTAHYGRVETAISFLPS
HHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHHHHHHCCC
SMETEPTDESGT
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA