Definition | Streptococcus pneumoniae D39, complete genome. |
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Accession | NC_008533 |
Length | 2,046,115 |
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The map label for this gene is 116516672
Identifier: 116516672
GI number: 116516672
Start: 1184440
End: 1185018
Strand: Reverse
Name: 116516672
Synonym: SPD_1155
Alternate gene names: NA
Gene position: 1185018-1184440 (Counterclockwise)
Preceding gene: 116516026
Following gene: 116516999
Centisome position: 57.92
GC content: 39.38
Gene sequence:
>579_bases TTGGTCAGAAATTATTGGAAGGCTAAAAGCTGGTTACTAGTTTTAGCTTTGTCATTTTTAATTCTTTCCCCAGCAGGTGC CCAAGAAAGCTTGAGTTTTTTCTTTGTGAAAATCACAGATGCATCCAAAACGGTTAAAAATGGTGGTCAGACTGAGACCC AGAAACTCGTTACGAAGATGGCATCAGACTTCGAAAGAGTAGAAAATAAGGATTCTGAGGTTGGTAAGATTGTTAAGGAA AAGTTAGCTCTATCTGGAGATATTACTGAAGCCAAACTCACCGAAATTTCCTCAGCTCTATTAGCTTTTGAAAAAGAACA AAATCCTGTTGACCTAGATGCGGAAAAGGAAAAATTGGTAAACCGTCTAAGTCCTCGTTTTGAAACCTTAGAACAGGCCA TTGCCTCCAAAGATTTGGAAAAAGTCCGAGAAGCTTTTAAGAAAATGAATTCCACTTGGACCATCAATGAAAGTGTGGTT CGTGACAATAGTACAGCTCATTATGGACGTGTTGAAACAGCTATTTCCTTCCTGCCTAGTAGCATGGAAACCGAACCTAC AGATGAGTCTGGAACATGA
Upstream 100 bases:
>100_bases CAAACTAACCTAGGTGCTACTGATAAGATGAATGAATACATCACTCACATAGGTAGTGGACTTTTTACTTGCTTTGGTGG TGTGGAGAAAGGAGGCTACA
Downstream 100 bases:
>100_bases AAACAGCAGTTGATTTCAAGAAACAAAAAAGAACAGCCGAAACTGTTCTCTTATCATTATTTGAGACCGTATTTTTTGTT GAAACGATCCACGCGTCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: Permease; FTR1 Family Iron Permease; Fe2+/Pb2+ Permease
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MVRNYWKAKSWLLVLALSFLILSPAGAQESLSFFFVKITDASKTVKNGGQTETQKLVTKMASDFERVENKDSEVGKIVKE KLALSGDITEAKLTEISSALLAFEKEQNPVDLDAEKEKLVNRLSPRFETLEQAIASKDLEKVREAFKKMNSTWTINESVV RDNSTAHYGRVETAISFLPSSMETEPTDESGT
Sequences:
>Translated_192_residues MVRNYWKAKSWLLVLALSFLILSPAGAQESLSFFFVKITDASKTVKNGGQTETQKLVTKMASDFERVENKDSEVGKIVKE KLALSGDITEAKLTEISSALLAFEKEQNPVDLDAEKEKLVNRLSPRFETLEQAIASKDLEKVREAFKKMNSTWTINESVV RDNSTAHYGRVETAISFLPSSMETEPTDESGT >Mature_192_residues MVRNYWKAKSWLLVLALSFLILSPAGAQESLSFFFVKITDASKTVKNGGQTETQKLVTKMASDFERVENKDSEVGKIVKE KLALSGDITEAKLTEISSALLAFEKEQNPVDLDAEKEKLVNRLSPRFETLEQAIASKDLEKVREAFKKMNSTWTINESVV RDNSTAHYGRVETAISFLPSSMETEPTDESGT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21442; Mature: 21442
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRNYWKAKSWLLVLALSFLILSPAGAQESLSFFFVKITDASKTVKNGGQTETQKLVTKM CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHHCCCCHHHHHHHHHH ASDFERVENKDSEVGKIVKEKLALSGDITEAKLTEISSALLAFEKEQNPVDLDAEKEKLV HHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH NRLSPRFETLEQAIASKDLEKVREAFKKMNSTWTINESVVRDNSTAHYGRVETAISFLPS HHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHHHHHHCCC SMETEPTDESGT CCCCCCCCCCCC >Mature Secondary Structure MVRNYWKAKSWLLVLALSFLILSPAGAQESLSFFFVKITDASKTVKNGGQTETQKLVTKM CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHHCCCCHHHHHHHHHH ASDFERVENKDSEVGKIVKEKLALSGDITEAKLTEISSALLAFEKEQNPVDLDAEKEKLV HHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH NRLSPRFETLEQAIASKDLEKVREAFKKMNSTWTINESVVRDNSTAHYGRVETAISFLPS HHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHHHHHHCCC SMETEPTDESGT CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA