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The map label for this gene is yidA [H]

Identifier: 116515438

GI number: 116515438

Start: 1133057

End: 1133875

Strand: Reverse

Name: yidA [H]

Synonym: SPD_1102

Alternate gene names: 116515438

Gene position: 1133875-1133057 (Counterclockwise)

Preceding gene: 116516975

Following gene: 116516398

Centisome position: 55.42

GC content: 42.25

Gene sequence:

>819_bases
ATGGCAGATATAAAATTGATTGCATTGGACTTGGACGGGACCTTGCTGACTACTGATAAAAGGCTGACGGATCGTACCAA
GGAAACCTTGAAAGCTGCGCGTGATCGTGGTATCAAGGTCGTATTGACAACTGGTCGTCCCTTAAAAGCCATGGATTTCT
TTCTCCATGAGTTAGGGACTGACGGTCAGGAAGATGAGTATACCATTACTTTTAATGGTGGATTAGTTCAGAAAAATACA
GGAGAAATCCTTGATAAAACAGTCTTTTCATATGATGATGTGGCACGTTTGTATGAAGAAACAGAGAAATTATCACTGCC
TCTTGATGCCATCTCAGAAGGAACAGTTTATCAAATCCAATCGGACCAAGAAAGTCTTTATGCCAAATTCAATCCAGCTT
TGACCTTTGTTCCAGTGGACTTTGAAGACTTATCTAGTCAAATGACCTACAACAAATGCGTGACTGCCTTTGCTCAAGAA
CCCTTGGATGCAGCCATTCAGAAGATTTCTCCAGAATTGTTTGACCAATATGAAATCTTTAAATCACGTGAAATGTTGCT
AGAATGGTCACCAAAGAATGTTCATAAAGCAACAGGTTTGGCAAAACTAATCAGCCATCTTGGAATCGACCAAAGTCAAG
TGATGGCTTGTGGTGACGAGGCCAATGACCTCTCTATGATTGAATGGGCAGGTCTTGGTGTTGCTATGCAAAACGCTGTT
CCTGAAGTAAAGGCAGCCGCAAATGTAGTGACGCCGATGACCAACGATGAGGAAGCTGTCGCCTGGGCTATCGAAGAATA
TGTGCTAAAGGAGAACTAA

Upstream 100 bases:

>100_bases
TAGCTCCTGAAAATGCACGACCTGAAATTTTAGAATTAGCAAAGACTGTGATTGGTCACCATAAGGAACGGTCGGTTATA
GCTTATATGGAGGGCTTATA

Downstream 100 bases:

>100_bases
GATATGGGATTGTTTGACCGTCTATTCGGAAAAAAAGAAGAACCTAAAATCGAAGAAGTTGTAAAAGAAGCTCTGGAAAA
TCTTGATTTGTCTGAAGATG

Product: Cof family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MADIKLIALDLDGTLLTTDKRLTDRTKETLKAARDRGIKVVLTTGRPLKAMDFFLHELGTDGQEDEYTITFNGGLVQKNT
GEILDKTVFSYDDVARLYEETEKLSLPLDAISEGTVYQIQSDQESLYAKFNPALTFVPVDFEDLSSQMTYNKCVTAFAQE
PLDAAIQKISPELFDQYEIFKSREMLLEWSPKNVHKATGLAKLISHLGIDQSQVMACGDEANDLSMIEWAGLGVAMQNAV
PEVKAAANVVTPMTNDEEAVAWAIEEYVLKEN

Sequences:

>Translated_272_residues
MADIKLIALDLDGTLLTTDKRLTDRTKETLKAARDRGIKVVLTTGRPLKAMDFFLHELGTDGQEDEYTITFNGGLVQKNT
GEILDKTVFSYDDVARLYEETEKLSLPLDAISEGTVYQIQSDQESLYAKFNPALTFVPVDFEDLSSQMTYNKCVTAFAQE
PLDAAIQKISPELFDQYEIFKSREMLLEWSPKNVHKATGLAKLISHLGIDQSQVMACGDEANDLSMIEWAGLGVAMQNAV
PEVKAAANVVTPMTNDEEAVAWAIEEYVLKEN
>Mature_271_residues
ADIKLIALDLDGTLLTTDKRLTDRTKETLKAARDRGIKVVLTTGRPLKAMDFFLHELGTDGQEDEYTITFNGGLVQKNTG
EILDKTVFSYDDVARLYEETEKLSLPLDAISEGTVYQIQSDQESLYAKFNPALTFVPVDFEDLSSQMTYNKCVTAFAQEP
LDAAIQKISPELFDQYEIFKSREMLLEWSPKNVHKATGLAKLISHLGIDQSQVMACGDEANDLSMIEWAGLGVAMQNAVP
EVKAAANVVTPMTNDEEAVAWAIEEYVLKEN

Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates erythrose 4-phosphate and mannose 1-phosphate [H]

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=269, Percent_Identity=40.1486988847584, Blast_Score=180, Evalue=8e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 30271; Mature: 30139

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: PS01228 COF_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADIKLIALDLDGTLLTTDKRLTDRTKETLKAARDRGIKVVLTTGRPLKAMDFFLHELGT
CCCEEEEEEECCCEEEECCHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHCC
DGQEDEYTITFNGGLVQKNTGEILDKTVFSYDDVARLYEETEKLSLPLDAISEGTVYQIQ
CCCCCCEEEEECCCEEECCCHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHCCCCCEEEEE
SDQESLYAKFNPALTFVPVDFEDLSSQMTYNKCVTAFAQEPLDAAIQKISPELFDQYEIF
CCHHHHHEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCHHHHHHHHHH
KSREMLLEWSPKNVHKATGLAKLISHLGIDQSQVMACGDEANDLSMIEWAGLGVAMQNAV
HHHHHHEECCCCHHHHHHHHHHHHHHHCCCHHHHEECCCCCCCCCEEEHHCCCHHHHHCC
PEVKAAANVVTPMTNDEEAVAWAIEEYVLKEN
CHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ADIKLIALDLDGTLLTTDKRLTDRTKETLKAARDRGIKVVLTTGRPLKAMDFFLHELGT
CCEEEEEEECCCEEEECCHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHCC
DGQEDEYTITFNGGLVQKNTGEILDKTVFSYDDVARLYEETEKLSLPLDAISEGTVYQIQ
CCCCCCEEEEECCCEEECCCHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHCCCCCEEEEE
SDQESLYAKFNPALTFVPVDFEDLSSQMTYNKCVTAFAQEPLDAAIQKISPELFDQYEIF
CCHHHHHEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCHHHHHHHHHH
KSREMLLEWSPKNVHKATGLAKLISHLGIDQSQVMACGDEANDLSMIEWAGLGVAMQNAV
HHHHHHEECCCCHHHHHHHHHHHHHHHCCCHHHHEECCCCCCCCCEEEHHCCCHHHHHCC
PEVKAAANVVTPMTNDEEAVAWAIEEYVLKEN
CHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]