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The map label for this gene is yggW [C]

Identifier: 116515278

GI number: 116515278

Start: 384938

End: 386089

Strand: Direct

Name: yggW [C]

Synonym: BCc_361

Alternate gene names: 116515278

Gene position: 384938-386089 (Clockwise)

Preceding gene: 116515277

Following gene: 116515279

Centisome position: 92.45

GC content: 17.36

Gene sequence:

>1152_bases
ATGAATAAAAAAAAAATATATAAATTACCACCAATCAGTTTATATATCCATATACCCTGGTGTATAAAAAAATGTCCATA
TTGTGATTTTCATTCATATAAAAAATCTAAAAAAATATTTGAAAAAAAATATATAAAAAACTTATTTCAAGATTTTAAAA
ATGATAAAAAAAAAATTTCAAAAAGAAAAATTTTATCTGTATTTATAGGAGGTGGAACACCTAGTTTATTAAAATTATCT
TCTATAAAATATTTTATAAAAAAAATAAAAAAAAAAATAATAAAATCTAAAAAAACAGAAATAACCATAGAAATAAATCC
AGATACAATAAATTCTAATCAATTAATAAAATATTATAATTTTGGAATTAATAGAACATCTATAGGAGTTCAAACTTTAA
ATAATAATTTACTAAAAAAAATTGAAAGAACTCATAATAAAAAAAAAACAATAAAACTAATAAAATCAACAAATAAAATA
AAAAACAGAAATTTAAATATTGATATTATATACGGATTACCAGAACAATCTATTCAAGATTCTTTAAATGATTTAAAAAT
AATTATAAATTTTAAACCCGAACATATTTCATGGTATTTATTAGATATAGAACCTAATACACCATTTTATACAAAAAATA
TTAAATTACCATCTCTTAAAAAAACAAGAAAAATGCAAAAATTAGGAAAAGAATTATTAATAAAATCAGGATATCAACAA
TATGAAATATCTTCTTTTGCAAGAAAAAAAAAATATAGATGTATACATAATTTAAATTACTGGAATTTTGGAGATTACAT
TGGTATTGGGTGTGGTGCACATGGAAAAATAACTAAAAAAAACAAAGATATTGTAAGAACAATCAAAACTAAACAAGATA
GTCAATATATAAAAAAAAAATATATACAAAAAAAATATATAGTTTCTAAAAAAGATATTCCATTTGAATTTTTTTTAAAT
AAATTTAGATTATTGAAACCTATATTACATCAAGATTTTGAAAATACAACAAATATAAAAAAAAGAAAAATAAAAAAAAA
AATTTCTATAGCTGAAAAACATGGATTTTTACAAACAAAAAAAAAATCATGGATTATTACTAAACATGGAAAAAAAAAAC
TAAATTCTTTATTATCAATTTTTTTAAAATAA

Upstream 100 bases:

>100_bases
AATAATTCTTGACAGCTGGATAAGAAAAAACATATAAAAAATTTATAAAAATTTATTATTTATTGTATATCAACTATTAT
TTATATTGAACTAATTAAAA

Downstream 100 bases:

>100_bases
ATCAAAATTTAAAAAATTTCTATTTTTATATAAAATTAATATTTTATTTAAAAAACAATCATGTTATTTCTTCAAAAAAT
GTTTTATAAATAATTAAATA

Product: YggW

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MNKKKIYKLPPISLYIHIPWCIKKCPYCDFHSYKKSKKIFEKKYIKNLFQDFKNDKKKISKRKILSVFIGGGTPSLLKLS
SIKYFIKKIKKKIIKSKKTEITIEINPDTINSNQLIKYYNFGINRTSIGVQTLNNNLLKKIERTHNKKKTIKLIKSTNKI
KNRNLNIDIIYGLPEQSIQDSLNDLKIIINFKPEHISWYLLDIEPNTPFYTKNIKLPSLKKTRKMQKLGKELLIKSGYQQ
YEISSFARKKKYRCIHNLNYWNFGDYIGIGCGAHGKITKKNKDIVRTIKTKQDSQYIKKKYIQKKYIVSKKDIPFEFFLN
KFRLLKPILHQDFENTTNIKKRKIKKKISIAEKHGFLQTKKKSWIITKHGKKKLNSLLSIFLK

Sequences:

>Translated_383_residues
MNKKKIYKLPPISLYIHIPWCIKKCPYCDFHSYKKSKKIFEKKYIKNLFQDFKNDKKKISKRKILSVFIGGGTPSLLKLS
SIKYFIKKIKKKIIKSKKTEITIEINPDTINSNQLIKYYNFGINRTSIGVQTLNNNLLKKIERTHNKKKTIKLIKSTNKI
KNRNLNIDIIYGLPEQSIQDSLNDLKIIINFKPEHISWYLLDIEPNTPFYTKNIKLPSLKKTRKMQKLGKELLIKSGYQQ
YEISSFARKKKYRCIHNLNYWNFGDYIGIGCGAHGKITKKNKDIVRTIKTKQDSQYIKKKYIQKKYIVSKKDIPFEFFLN
KFRLLKPILHQDFENTTNIKKRKIKKKISIAEKHGFLQTKKKSWIITKHGKKKLNSLLSIFLK
>Mature_383_residues
MNKKKIYKLPPISLYIHIPWCIKKCPYCDFHSYKKSKKIFEKKYIKNLFQDFKNDKKKISKRKILSVFIGGGTPSLLKLS
SIKYFIKKIKKKIIKSKKTEITIEINPDTINSNQLIKYYNFGINRTSIGVQTLNNNLLKKIERTHNKKKTIKLIKSTNKI
KNRNLNIDIIYGLPEQSIQDSLNDLKIIINFKPEHISWYLLDIEPNTPFYTKNIKLPSLKKTRKMQKLGKELLIKSGYQQ
YEISSFARKKKYRCIHNLNYWNFGDYIGIGCGAHGKITKKNKDIVRTIKTKQDSQYIKKKYIQKKYIVSKKDIPFEFFLN
KFRLLKPILHQDFENTTNIKKRKIKKKISIAEKHGFLQTKKKSWIITKHGKKKLNSLLSIFLK

Specific function: Unknown

COG id: COG0635

COG function: function code H; Coproporphyrinogen III oxidase and related Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the anaerobic coproporphyrinogen-III oxidase family [H]

Homologues:

Organism=Homo sapiens, GI8922911, Length=274, Percent_Identity=28.8321167883212, Blast_Score=177, Evalue=2e-44,
Organism=Escherichia coli, GI1789325, Length=378, Percent_Identity=41.2698412698413, Blast_Score=356, Evalue=2e-99,
Organism=Escherichia coli, GI87082341, Length=246, Percent_Identity=28.4552845528455, Blast_Score=111, Evalue=9e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR004559
- InterPro:   IPR010723
- InterPro:   IPR007197 [H]

Pfam domain/function: PF06969 HemN_C; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 45401; Mature: 45401

Theoretical pI: Translated: 10.87; Mature: 10.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKKIYKLPPISLYIHIPWCIKKCPYCDFHSYKKSKKIFEKKYIKNLFQDFKNDKKKIS
CCCCCEEECCCEEEEEECCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRKILSVFIGGGTPSLLKLSSIKYFIKKIKKKIIKSKKTEITIEINPDTINSNQLIKYYN
HHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEE
FGINRTSIGVQTLNNNLLKKIERTHNKKKTIKLIKSTNKIKNRNLNIDIIYGLPEQSIQD
CCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHC
SLNDLKIIINFKPEHISWYLLDIEPNTPFYTKNIKLPSLKKTRKMQKLGKELLIKSGYQQ
CCCCEEEEEEECCCCEEEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCH
YEISSFARKKKYRCIHNLNYWNFGDYIGIGCGAHGKITKKNKDIVRTIKTKQDSQYIKKK
HHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHCCCHHHHHHHH
YIQKKYIVSKKDIPFEFFLNKFRLLKPILHQDFENTTNIKKRKIKKKISIAEKHGFLQTK
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEC
KKSWIITKHGKKKLNSLLSIFLK
CCCEEEECCCHHHHHHHHHHHCC
>Mature Secondary Structure
MNKKKIYKLPPISLYIHIPWCIKKCPYCDFHSYKKSKKIFEKKYIKNLFQDFKNDKKKIS
CCCCCEEECCCEEEEEECCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRKILSVFIGGGTPSLLKLSSIKYFIKKIKKKIIKSKKTEITIEINPDTINSNQLIKYYN
HHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEE
FGINRTSIGVQTLNNNLLKKIERTHNKKKTIKLIKSTNKIKNRNLNIDIIYGLPEQSIQD
CCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHC
SLNDLKIIINFKPEHISWYLLDIEPNTPFYTKNIKLPSLKKTRKMQKLGKELLIKSGYQQ
CCCCEEEEEEECCCCEEEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCH
YEISSFARKKKYRCIHNLNYWNFGDYIGIGCGAHGKITKKNKDIVRTIKTKQDSQYIKKK
HHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHCCCHHHHHHHH
YIQKKYIVSKKDIPFEFFLNKFRLLKPILHQDFENTTNIKKRKIKKKISIAEKHGFLQTK
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEC
KKSWIITKHGKKKLNSLLSIFLK
CCCEEEECCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10993077 [H]