Definition | Buchnera aphidicola str. Cc (Cinara cedri), complete genome. |
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Accession | NC_008513 |
Length | 416,380 |
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The map label for this gene is yeaZ [H]
Identifier: 116515138
GI number: 116515138
Start: 238727
End: 239401
Strand: Direct
Name: yeaZ [H]
Synonym: BCc_202
Alternate gene names: 116515138
Gene position: 238727-239401 (Clockwise)
Preceding gene: 116515137
Following gene: 116515142
Centisome position: 57.33
GC content: 19.26
Gene sequence:
>675_bases ATGAATTTTAAAAAAAATATTTTAGCAATTGATACCTCGTTACATTCATGTTCTATTTCTTTGTTATATAAAAAGAAAAT TTATAGTTTATTTAAGCTATGTTCGAATGCACATGAGAAAAATATATTTTATATGATTAAAAAAATATTAATCCAATCAA ATACTACTTTAGATGAAATTAATTTCATCGCATGCACTATCGGACCAGGAAGTTTTACAGGAATTAGAATTTCTATAGGA ATTTCGCAAACTATTTCTACTATATATAATATTCCTATTATTGGTTTTTCTACATTAAAAATTTTATCAGAACAAAGCTG GAGAAAAAATTATGTTAAAAATGTTTTACTTATTATTAAGATTTCTAAAAATCAAATTTTTTGGGCTAAATATATAAAAA ATAAAATTGGTTTATGGATTGGAGAACATACAGAAAAATTATTTTCCAATATGAATATTATTAAAAAAAAAATTAAAAAA TATACTGGAAAATGGTCTTTAATTGGTTTTGAAAAAAAAATAAAAAAAAATTTTAAAAAATCAGTTAAATTATTTCAAAC AAATATTTTTACTCCACATTCAAATGATATTATTACTTATGCAGTAAAATATTTATTATTGTACAAAAAATACAACATAA AACAAATATACCCAAAATATTTATATAAAATATAA
Upstream 100 bases:
>100_bases AAAATTATTATTTTAAAATATTAAAATCTAATTTATATAAAATTTATTTAATACAAATAAAAAAAAATGATATTAATACA AAAAATAAAAGGAATTATTA
Downstream 100 bases:
>100_bases TAAAAAAAATTATATTTAATTATTTAATTATTATTTCACATTAGTAATATTAATTTCTAAAATTAGTAAATTTTTTTTTC TTTTTTCTATTTGAATAGAC
Product: YeaZ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MNFKKNILAIDTSLHSCSISLLYKKKIYSLFKLCSNAHEKNIFYMIKKILIQSNTTLDEINFIACTIGPGSFTGIRISIG ISQTISTIYNIPIIGFSTLKILSEQSWRKNYVKNVLLIIKISKNQIFWAKYIKNKIGLWIGEHTEKLFSNMNIIKKKIKK YTGKWSLIGFEKKIKKNFKKSVKLFQTNIFTPHSNDIITYAVKYLLLYKKYNIKQIYPKYLYKI
Sequences:
>Translated_224_residues MNFKKNILAIDTSLHSCSISLLYKKKIYSLFKLCSNAHEKNIFYMIKKILIQSNTTLDEINFIACTIGPGSFTGIRISIG ISQTISTIYNIPIIGFSTLKILSEQSWRKNYVKNVLLIIKISKNQIFWAKYIKNKIGLWIGEHTEKLFSNMNIIKKKIKK YTGKWSLIGFEKKIKKNFKKSVKLFQTNIFTPHSNDIITYAVKYLLLYKKYNIKQIYPKYLYKI >Mature_224_residues MNFKKNILAIDTSLHSCSISLLYKKKIYSLFKLCSNAHEKNIFYMIKKILIQSNTTLDEINFIACTIGPGSFTGIRISIG ISQTISTIYNIPIIGFSTLKILSEQSWRKNYVKNVLLIIKISKNQIFWAKYIKNKIGLWIGEHTEKLFSNMNIIKKKIKK YTGKWSLIGFEKKIKKNFKKSVKLFQTNIFTPHSNDIITYAVKYLLLYKKYNIKQIYPKYLYKI
Specific function: Unknown
COG id: COG1214
COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M22 family [H]
Homologues:
Organism=Escherichia coli, GI1788109, Length=217, Percent_Identity=32.7188940092166, Blast_Score=157, Evalue=7e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022496 - InterPro: IPR000905 [H]
Pfam domain/function: PF00814 Peptidase_M22 [H]
EC number: NA
Molecular weight: Translated: 26248; Mature: 26248
Theoretical pI: Translated: 10.64; Mature: 10.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFKKNILAIDTSLHSCSISLLYKKKIYSLFKLCSNAHEKNIFYMIKKILIQSNTTLDEI CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHC NFIACTIGPGSFTGIRISIGISQTISTIYNIPIIGFSTLKILSEQSWRKNYVKNVLLIIK EEEEEEECCCCCCEEEEEECHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEE ISKNQIFWAKYIKNKIGLWIGEHTEKLFSNMNIIKKKIKKYTGKWSLIGFEKKIKKNFKK ECCCCCHHHHHHHHHHCEEECHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHH SVKLFQTNIFTPHSNDIITYAVKYLLLYKKYNIKQIYPKYLYKI HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCC >Mature Secondary Structure MNFKKNILAIDTSLHSCSISLLYKKKIYSLFKLCSNAHEKNIFYMIKKILIQSNTTLDEI CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHC NFIACTIGPGSFTGIRISIGISQTISTIYNIPIIGFSTLKILSEQSWRKNYVKNVLLIIK EEEEEEECCCCCCEEEEEECHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEE ISKNQIFWAKYIKNKIGLWIGEHTEKLFSNMNIIKKKIKKYTGKWSLIGFEKKIKKNFKK ECCCCCHHHHHHHHHHCEEECHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHH SVKLFQTNIFTPHSNDIITYAVKYLLLYKKYNIKQIYPKYLYKI HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]