Definition Buchnera aphidicola str. Cc (Cinara cedri), complete genome.
Accession NC_008513
Length 416,380

Click here to switch to the map view.

The map label for this gene is yeaZ [H]

Identifier: 116515138

GI number: 116515138

Start: 238727

End: 239401

Strand: Direct

Name: yeaZ [H]

Synonym: BCc_202

Alternate gene names: 116515138

Gene position: 238727-239401 (Clockwise)

Preceding gene: 116515137

Following gene: 116515142

Centisome position: 57.33

GC content: 19.26

Gene sequence:

>675_bases
ATGAATTTTAAAAAAAATATTTTAGCAATTGATACCTCGTTACATTCATGTTCTATTTCTTTGTTATATAAAAAGAAAAT
TTATAGTTTATTTAAGCTATGTTCGAATGCACATGAGAAAAATATATTTTATATGATTAAAAAAATATTAATCCAATCAA
ATACTACTTTAGATGAAATTAATTTCATCGCATGCACTATCGGACCAGGAAGTTTTACAGGAATTAGAATTTCTATAGGA
ATTTCGCAAACTATTTCTACTATATATAATATTCCTATTATTGGTTTTTCTACATTAAAAATTTTATCAGAACAAAGCTG
GAGAAAAAATTATGTTAAAAATGTTTTACTTATTATTAAGATTTCTAAAAATCAAATTTTTTGGGCTAAATATATAAAAA
ATAAAATTGGTTTATGGATTGGAGAACATACAGAAAAATTATTTTCCAATATGAATATTATTAAAAAAAAAATTAAAAAA
TATACTGGAAAATGGTCTTTAATTGGTTTTGAAAAAAAAATAAAAAAAAATTTTAAAAAATCAGTTAAATTATTTCAAAC
AAATATTTTTACTCCACATTCAAATGATATTATTACTTATGCAGTAAAATATTTATTATTGTACAAAAAATACAACATAA
AACAAATATACCCAAAATATTTATATAAAATATAA

Upstream 100 bases:

>100_bases
AAAATTATTATTTTAAAATATTAAAATCTAATTTATATAAAATTTATTTAATACAAATAAAAAAAAATGATATTAATACA
AAAAATAAAAGGAATTATTA

Downstream 100 bases:

>100_bases
TAAAAAAAATTATATTTAATTATTTAATTATTATTTCACATTAGTAATATTAATTTCTAAAATTAGTAAATTTTTTTTTC
TTTTTTCTATTTGAATAGAC

Product: YeaZ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MNFKKNILAIDTSLHSCSISLLYKKKIYSLFKLCSNAHEKNIFYMIKKILIQSNTTLDEINFIACTIGPGSFTGIRISIG
ISQTISTIYNIPIIGFSTLKILSEQSWRKNYVKNVLLIIKISKNQIFWAKYIKNKIGLWIGEHTEKLFSNMNIIKKKIKK
YTGKWSLIGFEKKIKKNFKKSVKLFQTNIFTPHSNDIITYAVKYLLLYKKYNIKQIYPKYLYKI

Sequences:

>Translated_224_residues
MNFKKNILAIDTSLHSCSISLLYKKKIYSLFKLCSNAHEKNIFYMIKKILIQSNTTLDEINFIACTIGPGSFTGIRISIG
ISQTISTIYNIPIIGFSTLKILSEQSWRKNYVKNVLLIIKISKNQIFWAKYIKNKIGLWIGEHTEKLFSNMNIIKKKIKK
YTGKWSLIGFEKKIKKNFKKSVKLFQTNIFTPHSNDIITYAVKYLLLYKKYNIKQIYPKYLYKI
>Mature_224_residues
MNFKKNILAIDTSLHSCSISLLYKKKIYSLFKLCSNAHEKNIFYMIKKILIQSNTTLDEINFIACTIGPGSFTGIRISIG
ISQTISTIYNIPIIGFSTLKILSEQSWRKNYVKNVLLIIKISKNQIFWAKYIKNKIGLWIGEHTEKLFSNMNIIKKKIKK
YTGKWSLIGFEKKIKKNFKKSVKLFQTNIFTPHSNDIITYAVKYLLLYKKYNIKQIYPKYLYKI

Specific function: Unknown

COG id: COG1214

COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M22 family [H]

Homologues:

Organism=Escherichia coli, GI1788109, Length=217, Percent_Identity=32.7188940092166, Blast_Score=157, Evalue=7e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022496
- InterPro:   IPR000905 [H]

Pfam domain/function: PF00814 Peptidase_M22 [H]

EC number: NA

Molecular weight: Translated: 26248; Mature: 26248

Theoretical pI: Translated: 10.64; Mature: 10.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFKKNILAIDTSLHSCSISLLYKKKIYSLFKLCSNAHEKNIFYMIKKILIQSNTTLDEI
CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHC
NFIACTIGPGSFTGIRISIGISQTISTIYNIPIIGFSTLKILSEQSWRKNYVKNVLLIIK
EEEEEEECCCCCCEEEEEECHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEE
ISKNQIFWAKYIKNKIGLWIGEHTEKLFSNMNIIKKKIKKYTGKWSLIGFEKKIKKNFKK
ECCCCCHHHHHHHHHHCEEECHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHH
SVKLFQTNIFTPHSNDIITYAVKYLLLYKKYNIKQIYPKYLYKI
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCC
>Mature Secondary Structure
MNFKKNILAIDTSLHSCSISLLYKKKIYSLFKLCSNAHEKNIFYMIKKILIQSNTTLDEI
CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHC
NFIACTIGPGSFTGIRISIGISQTISTIYNIPIIGFSTLKILSEQSWRKNYVKNVLLIIK
EEEEEEECCCCCCEEEEEECHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEE
ISKNQIFWAKYIKNKIGLWIGEHTEKLFSNMNIIKKKIKKYTGKWSLIGFEKKIKKNFKK
ECCCCCHHHHHHHHHHCEEECHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHH
SVKLFQTNIFTPHSNDIITYAVKYLLLYKKYNIKQIYPKYLYKI
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]