Definition Buchnera aphidicola str. Cc (Cinara cedri), complete genome.
Accession NC_008513
Length 416,380

Click here to switch to the map view.

The map label for this gene is yoaE [C]

Identifier: 116515137

GI number: 116515137

Start: 237138

End: 238727

Strand: Direct

Name: yoaE [C]

Synonym: BCc_201

Alternate gene names: 116515137

Gene position: 237138-238727 (Clockwise)

Preceding gene: 116515136

Following gene: 116515138

Centisome position: 56.95

GC content: 13.77

Gene sequence:

>1590_bases
ATGTCTTCTTTTTTAGATCCAACTATTTGGATGGGTCTGTTTACATTAGTTTTTTTAGAAATTATTTTAAGTATTGATAA
TGTTATATTTATTGCTATTTTATCAAAAAAATTACCTAAAAATCAACAAAATAAAGCAAGATATACTGGTTTAATATTTG
CATTATTTATGCGTTTTGGGTTGCTTGGTATAACATCAAAATTAATATCTTTAACAAAACCAATTATAATAAACAAATTT
TTTATTTTTTCGGGAAAAGAAATTATTTTATTAATAGGTGGTATTTTTTTATTTATAAAAACAATATTTGAATTATTTAA
TCATATTTATATATTTGATAAAAAAAAAAAAAAAAAAGATCTTAGATCAAGCTTTTGGTATATAGTTATTCAAATTGTAA
TATTAGATGTAATTTTTTCTATTGATTCAATAATGACTGCTATTGGTACAACACATAACCTTTTTATTATGATAATAGCA
GTAACAATATCAACTATTTTAATGATTTTTTTATCTAAATTATTAATTAAATTTATTAATTCAAAAAAATCTATTATTAC
ATTATGTTTAAGTTTATTACTAATGATTAGTTTAAACTTAATTATAGAATCATTAGGTTTTTATATATCTAAAAAATATT
TATATATATCTGTTGAATTTTCATTATTCATAGAAATTATAAATCAAATTAGAATTAATAAAAAAAAAAAAAAAGAATCA
AAAAAATTATTTAAAAAAAAAATATTATCATTAATTTCTTATATAATTAAAAAATATAATAAGAAACATAATTTTATTAA
TCAAAAATTTTTATTTAATAAAAAAAAAAATATTAAATATTTAAATAATGATATAAATGATAATAATAATATTATTAAAG
AAATAAAAATAGTAAATCAAATATTTCATTTAAATAATTATTCAATCTATAAAATTATGATTCCTAAAGAAAAAATTAAA
TGGATTAATATTAATGATAGTTATCAAAACATAAAAAAAAAATTATTAAATATTCCGTATAAAATAATAATATTATGTAA
TTGGAAATTTAATGAAGTTATAGGTTTTATTAAAAAAGAAAAATTAATTAATTTAATTAATAAAAATAAAAATATAAACA
ATTATATTGAATATAATTCATTAATTTTTGTTCCTGATTCATTAAATATAATTAATATTATAAAAATTTTACGTTATTCA
TATAACAATATTATTTTAATAAATAATAGATATGGAAAAGTTGTTGGAATATTAACTATAAAAAACCTTTTTCAAACTGT
TTTTGGAAATTTTTTGGATATTAATAATACTCCTAAAATTATTTTAAATAAAAAAAAATGGATAATGAATGGTTCGATTA
AATTAAAAAATTTAGAGAAAATTTTAAAAATTAATTTTAAAGAAGTAAATTATAAATGTTTTTCATTAGCAGATTTTTTA
ATCTATAAATATAAAAAAATTCCTAAAACAGGAAAAATAATAATTTATAAAAATTATTATTTTAAAATATTAAAATCTAA
TTTATATAAAATTTATTTAATACAAATAAAAAAAAATGATATTAATACAAAAAATAAAAGGAATTATTAA

Upstream 100 bases:

>100_bases
AATATATAATAATATAATATTTATTTATATTATTATAAAATATTGACAAATAACTATTTACAATATTATTATTTTTTAAT
CATTTTCTGGAGTACTTTTC

Downstream 100 bases:

>100_bases
TGAATTTTAAAAAAAATATTTTAGCAATTGATACCTCGTTACATTCATGTTCTATTTCTTTGTTATATAAAAAGAAAATT
TATAGTTTATTTAAGCTATG

Product: YoaE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 529; Mature: 528

Protein sequence:

>529_residues
MSSFLDPTIWMGLFTLVFLEIILSIDNVIFIAILSKKLPKNQQNKARYTGLIFALFMRFGLLGITSKLISLTKPIIINKF
FIFSGKEIILLIGGIFLFIKTIFELFNHIYIFDKKKKKKDLRSSFWYIVIQIVILDVIFSIDSIMTAIGTTHNLFIMIIA
VTISTILMIFLSKLLIKFINSKKSIITLCLSLLLMISLNLIIESLGFYISKKYLYISVEFSLFIEIINQIRINKKKKKES
KKLFKKKILSLISYIIKKYNKKHNFINQKFLFNKKKNIKYLNNDINDNNNIIKEIKIVNQIFHLNNYSIYKIMIPKEKIK
WININDSYQNIKKKLLNIPYKIIILCNWKFNEVIGFIKKEKLINLINKNKNINNYIEYNSLIFVPDSLNIINIIKILRYS
YNNIILINNRYGKVVGILTIKNLFQTVFGNFLDINNTPKIILNKKKWIMNGSIKLKNLEKILKINFKEVNYKCFSLADFL
IYKYKKIPKTGKIIIYKNYYFKILKSNLYKIYLIQIKKNDINTKNKRNY

Sequences:

>Translated_529_residues
MSSFLDPTIWMGLFTLVFLEIILSIDNVIFIAILSKKLPKNQQNKARYTGLIFALFMRFGLLGITSKLISLTKPIIINKF
FIFSGKEIILLIGGIFLFIKTIFELFNHIYIFDKKKKKKDLRSSFWYIVIQIVILDVIFSIDSIMTAIGTTHNLFIMIIA
VTISTILMIFLSKLLIKFINSKKSIITLCLSLLLMISLNLIIESLGFYISKKYLYISVEFSLFIEIINQIRINKKKKKES
KKLFKKKILSLISYIIKKYNKKHNFINQKFLFNKKKNIKYLNNDINDNNNIIKEIKIVNQIFHLNNYSIYKIMIPKEKIK
WININDSYQNIKKKLLNIPYKIIILCNWKFNEVIGFIKKEKLINLINKNKNINNYIEYNSLIFVPDSLNIINIIKILRYS
YNNIILINNRYGKVVGILTIKNLFQTVFGNFLDINNTPKIILNKKKWIMNGSIKLKNLEKILKINFKEVNYKCFSLADFL
IYKYKKIPKTGKIIIYKNYYFKILKSNLYKIYLIQIKKNDINTKNKRNY
>Mature_528_residues
SSFLDPTIWMGLFTLVFLEIILSIDNVIFIAILSKKLPKNQQNKARYTGLIFALFMRFGLLGITSKLISLTKPIIINKFF
IFSGKEIILLIGGIFLFIKTIFELFNHIYIFDKKKKKKDLRSSFWYIVIQIVILDVIFSIDSIMTAIGTTHNLFIMIIAV
TISTILMIFLSKLLIKFINSKKSIITLCLSLLLMISLNLIIESLGFYISKKYLYISVEFSLFIEIINQIRINKKKKKESK
KLFKKKILSLISYIIKKYNKKHNFINQKFLFNKKKNIKYLNNDINDNNNIIKEIKIVNQIFHLNNYSIYKIMIPKEKIKW
ININDSYQNIKKKLLNIPYKIIILCNWKFNEVIGFIKKEKLINLINKNKNINNYIEYNSLIFVPDSLNIINIIKILRYSY
NNIILINNRYGKVVGILTIKNLFQTVFGNFLDINNTPKIILNKKKWIMNGSIKLKNLEKILKINFKEVNYKCFSLADFLI
YKYKKIPKTGKIIIYKNYYFKILKSNLYKIYLIQIKKNDINTKNKRNY

Specific function: Unknown

COG id: COG0861

COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Escherichia coli, GI1788119, Length=522, Percent_Identity=32.9501915708812, Blast_Score=354, Evalue=7e-99,
Organism=Escherichia coli, GI87082033, Length=526, Percent_Identity=29.0874524714829, Blast_Score=263, Evalue=2e-71,
Organism=Escherichia coli, GI1789197, Length=234, Percent_Identity=39.7435897435897, Blast_Score=141, Evalue=1e-34,
Organism=Escherichia coli, GI1790664, Length=233, Percent_Identity=21.8884120171674, Blast_Score=109, Evalue=4e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR005496
- InterPro:   IPR005170 [H]

Pfam domain/function: PF03471 CorC_HlyC; PF03741 TerC [H]

EC number: NA

Molecular weight: Translated: 62629; Mature: 62498

Theoretical pI: Translated: 10.70; Mature: 10.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSFLDPTIWMGLFTLVFLEIILSIDNVIFIAILSKKLPKNQQNKARYTGLIFALFMRFG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
LLGITSKLISLTKPIIINKFFIFSGKEIILLIGGIFLFIKTIFELFNHIYIFDKKKKKKD
HHHHHHHHHHHHCCHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHEEEEECHHHHHH
LRSSFWYIVIQIVILDVIFSIDSIMTAIGTTHNLFIMIIAVTISTILMIFLSKLLIKFIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SKKSIITLCLSLLLMISLNLIIESLGFYISKKYLYISVEFSLFIEIINQIRINKKKKKES
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEHHHHHHHHHHHHHCCHHHHHHH
KKLFKKKILSLISYIIKKYNKKHNFINQKFLFNKKKNIKYLNNDINDNNNIIKEIKIVNQ
HHHHHHHHHHHHHHHHHHHCHHCCCCCHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHH
IFHLNNYSIYKIMIPKEKIKWININDSYQNIKKKLLNIPYKIIILCNWKFNEVIGFIKKE
HHHCCCCEEEEEEECCCCEEEEECCCHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHH
KLINLINKNKNINNYIEYNSLIFVPDSLNIINIIKILRYSYNNIILINNRYGKVVGILTI
HHHHHHHCCCCCCCEEEECCEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEHHHH
KNLFQTVFGNFLDINNTPKIILNKKKWIMNGSIKLKNLEKILKINFKEVNYKCFSLADFL
HHHHHHHCCCEEECCCCCCEEEECCEEEEECCEEHHHHHHHHHCCHHHCCCHHHHHHHHH
IYKYKKIPKTGKIIIYKNYYFKILKSNLYKIYLIQIKKNDINTKNKRNY
HHHHHCCCCCCCEEEEEHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
SSFLDPTIWMGLFTLVFLEIILSIDNVIFIAILSKKLPKNQQNKARYTGLIFALFMRFG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
LLGITSKLISLTKPIIINKFFIFSGKEIILLIGGIFLFIKTIFELFNHIYIFDKKKKKKD
HHHHHHHHHHHHCCHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHEEEEECHHHHHH
LRSSFWYIVIQIVILDVIFSIDSIMTAIGTTHNLFIMIIAVTISTILMIFLSKLLIKFIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SKKSIITLCLSLLLMISLNLIIESLGFYISKKYLYISVEFSLFIEIINQIRINKKKKKES
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEHHHHHHHHHHHHHCCHHHHHHH
KKLFKKKILSLISYIIKKYNKKHNFINQKFLFNKKKNIKYLNNDINDNNNIIKEIKIVNQ
HHHHHHHHHHHHHHHHHHHCHHCCCCCHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHH
IFHLNNYSIYKIMIPKEKIKWININDSYQNIKKKLLNIPYKIIILCNWKFNEVIGFIKKE
HHHCCCCEEEEEEECCCCEEEEECCCHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHH
KLINLINKNKNINNYIEYNSLIFVPDSLNIINIIKILRYSYNNIILINNRYGKVVGILTI
HHHHHHHCCCCCCCEEEECCEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEHHHH
KNLFQTVFGNFLDINNTPKIILNKKKWIMNGSIKLKNLEKILKINFKEVNYKCFSLADFL
HHHHHHHCCCEEECCCCCCEEEECCEEEEECCEEHHHHHHHHHCCHHHCCCHHHHHHHHH
IYKYKKIPKTGKIIIYKNYYFKILKSNLYKIYLIQIKKNDINTKNKRNY
HHHHHCCCCCCCEEEEEHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12522265 [H]