Definition | Buchnera aphidicola str. Cc (Cinara cedri), complete genome. |
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Accession | NC_008513 |
Length | 416,380 |
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The map label for this gene is yoaE [C]
Identifier: 116515137
GI number: 116515137
Start: 237138
End: 238727
Strand: Direct
Name: yoaE [C]
Synonym: BCc_201
Alternate gene names: 116515137
Gene position: 237138-238727 (Clockwise)
Preceding gene: 116515136
Following gene: 116515138
Centisome position: 56.95
GC content: 13.77
Gene sequence:
>1590_bases ATGTCTTCTTTTTTAGATCCAACTATTTGGATGGGTCTGTTTACATTAGTTTTTTTAGAAATTATTTTAAGTATTGATAA TGTTATATTTATTGCTATTTTATCAAAAAAATTACCTAAAAATCAACAAAATAAAGCAAGATATACTGGTTTAATATTTG CATTATTTATGCGTTTTGGGTTGCTTGGTATAACATCAAAATTAATATCTTTAACAAAACCAATTATAATAAACAAATTT TTTATTTTTTCGGGAAAAGAAATTATTTTATTAATAGGTGGTATTTTTTTATTTATAAAAACAATATTTGAATTATTTAA TCATATTTATATATTTGATAAAAAAAAAAAAAAAAAAGATCTTAGATCAAGCTTTTGGTATATAGTTATTCAAATTGTAA TATTAGATGTAATTTTTTCTATTGATTCAATAATGACTGCTATTGGTACAACACATAACCTTTTTATTATGATAATAGCA GTAACAATATCAACTATTTTAATGATTTTTTTATCTAAATTATTAATTAAATTTATTAATTCAAAAAAATCTATTATTAC ATTATGTTTAAGTTTATTACTAATGATTAGTTTAAACTTAATTATAGAATCATTAGGTTTTTATATATCTAAAAAATATT TATATATATCTGTTGAATTTTCATTATTCATAGAAATTATAAATCAAATTAGAATTAATAAAAAAAAAAAAAAAGAATCA AAAAAATTATTTAAAAAAAAAATATTATCATTAATTTCTTATATAATTAAAAAATATAATAAGAAACATAATTTTATTAA TCAAAAATTTTTATTTAATAAAAAAAAAAATATTAAATATTTAAATAATGATATAAATGATAATAATAATATTATTAAAG AAATAAAAATAGTAAATCAAATATTTCATTTAAATAATTATTCAATCTATAAAATTATGATTCCTAAAGAAAAAATTAAA TGGATTAATATTAATGATAGTTATCAAAACATAAAAAAAAAATTATTAAATATTCCGTATAAAATAATAATATTATGTAA TTGGAAATTTAATGAAGTTATAGGTTTTATTAAAAAAGAAAAATTAATTAATTTAATTAATAAAAATAAAAATATAAACA ATTATATTGAATATAATTCATTAATTTTTGTTCCTGATTCATTAAATATAATTAATATTATAAAAATTTTACGTTATTCA TATAACAATATTATTTTAATAAATAATAGATATGGAAAAGTTGTTGGAATATTAACTATAAAAAACCTTTTTCAAACTGT TTTTGGAAATTTTTTGGATATTAATAATACTCCTAAAATTATTTTAAATAAAAAAAAATGGATAATGAATGGTTCGATTA AATTAAAAAATTTAGAGAAAATTTTAAAAATTAATTTTAAAGAAGTAAATTATAAATGTTTTTCATTAGCAGATTTTTTA ATCTATAAATATAAAAAAATTCCTAAAACAGGAAAAATAATAATTTATAAAAATTATTATTTTAAAATATTAAAATCTAA TTTATATAAAATTTATTTAATACAAATAAAAAAAAATGATATTAATACAAAAAATAAAAGGAATTATTAA
Upstream 100 bases:
>100_bases AATATATAATAATATAATATTTATTTATATTATTATAAAATATTGACAAATAACTATTTACAATATTATTATTTTTTAAT CATTTTCTGGAGTACTTTTC
Downstream 100 bases:
>100_bases TGAATTTTAAAAAAAATATTTTAGCAATTGATACCTCGTTACATTCATGTTCTATTTCTTTGTTATATAAAAAGAAAATT TATAGTTTATTTAAGCTATG
Product: YoaE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 529; Mature: 528
Protein sequence:
>529_residues MSSFLDPTIWMGLFTLVFLEIILSIDNVIFIAILSKKLPKNQQNKARYTGLIFALFMRFGLLGITSKLISLTKPIIINKF FIFSGKEIILLIGGIFLFIKTIFELFNHIYIFDKKKKKKDLRSSFWYIVIQIVILDVIFSIDSIMTAIGTTHNLFIMIIA VTISTILMIFLSKLLIKFINSKKSIITLCLSLLLMISLNLIIESLGFYISKKYLYISVEFSLFIEIINQIRINKKKKKES KKLFKKKILSLISYIIKKYNKKHNFINQKFLFNKKKNIKYLNNDINDNNNIIKEIKIVNQIFHLNNYSIYKIMIPKEKIK WININDSYQNIKKKLLNIPYKIIILCNWKFNEVIGFIKKEKLINLINKNKNINNYIEYNSLIFVPDSLNIINIIKILRYS YNNIILINNRYGKVVGILTIKNLFQTVFGNFLDINNTPKIILNKKKWIMNGSIKLKNLEKILKINFKEVNYKCFSLADFL IYKYKKIPKTGKIIIYKNYYFKILKSNLYKIYLIQIKKNDINTKNKRNY
Sequences:
>Translated_529_residues MSSFLDPTIWMGLFTLVFLEIILSIDNVIFIAILSKKLPKNQQNKARYTGLIFALFMRFGLLGITSKLISLTKPIIINKF FIFSGKEIILLIGGIFLFIKTIFELFNHIYIFDKKKKKKDLRSSFWYIVIQIVILDVIFSIDSIMTAIGTTHNLFIMIIA VTISTILMIFLSKLLIKFINSKKSIITLCLSLLLMISLNLIIESLGFYISKKYLYISVEFSLFIEIINQIRINKKKKKES KKLFKKKILSLISYIIKKYNKKHNFINQKFLFNKKKNIKYLNNDINDNNNIIKEIKIVNQIFHLNNYSIYKIMIPKEKIK WININDSYQNIKKKLLNIPYKIIILCNWKFNEVIGFIKKEKLINLINKNKNINNYIEYNSLIFVPDSLNIINIIKILRYS YNNIILINNRYGKVVGILTIKNLFQTVFGNFLDINNTPKIILNKKKWIMNGSIKLKNLEKILKINFKEVNYKCFSLADFL IYKYKKIPKTGKIIIYKNYYFKILKSNLYKIYLIQIKKNDINTKNKRNY >Mature_528_residues SSFLDPTIWMGLFTLVFLEIILSIDNVIFIAILSKKLPKNQQNKARYTGLIFALFMRFGLLGITSKLISLTKPIIINKFF IFSGKEIILLIGGIFLFIKTIFELFNHIYIFDKKKKKKDLRSSFWYIVIQIVILDVIFSIDSIMTAIGTTHNLFIMIIAV TISTILMIFLSKLLIKFINSKKSIITLCLSLLLMISLNLIIESLGFYISKKYLYISVEFSLFIEIINQIRINKKKKKESK KLFKKKILSLISYIIKKYNKKHNFINQKFLFNKKKNIKYLNNDINDNNNIIKEIKIVNQIFHLNNYSIYKIMIPKEKIKW ININDSYQNIKKKLLNIPYKIIILCNWKFNEVIGFIKKEKLINLINKNKNINNYIEYNSLIFVPDSLNIINIIKILRYSY NNIILINNRYGKVVGILTIKNLFQTVFGNFLDINNTPKIILNKKKWIMNGSIKLKNLEKILKINFKEVNYKCFSLADFLI YKYKKIPKTGKIIIYKNYYFKILKSNLYKIYLIQIKKNDINTKNKRNY
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Escherichia coli, GI1788119, Length=522, Percent_Identity=32.9501915708812, Blast_Score=354, Evalue=7e-99, Organism=Escherichia coli, GI87082033, Length=526, Percent_Identity=29.0874524714829, Blast_Score=263, Evalue=2e-71, Organism=Escherichia coli, GI1789197, Length=234, Percent_Identity=39.7435897435897, Blast_Score=141, Evalue=1e-34, Organism=Escherichia coli, GI1790664, Length=233, Percent_Identity=21.8884120171674, Blast_Score=109, Evalue=4e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016169 - InterPro: IPR000644 - InterPro: IPR005496 - InterPro: IPR005170 [H]
Pfam domain/function: PF03471 CorC_HlyC; PF03741 TerC [H]
EC number: NA
Molecular weight: Translated: 62629; Mature: 62498
Theoretical pI: Translated: 10.70; Mature: 10.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSFLDPTIWMGLFTLVFLEIILSIDNVIFIAILSKKLPKNQQNKARYTGLIFALFMRFG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH LLGITSKLISLTKPIIINKFFIFSGKEIILLIGGIFLFIKTIFELFNHIYIFDKKKKKKD HHHHHHHHHHHHCCHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHEEEEECHHHHHH LRSSFWYIVIQIVILDVIFSIDSIMTAIGTTHNLFIMIIAVTISTILMIFLSKLLIKFIN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SKKSIITLCLSLLLMISLNLIIESLGFYISKKYLYISVEFSLFIEIINQIRINKKKKKES CCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEHHHHHHHHHHHHHCCHHHHHHH KKLFKKKILSLISYIIKKYNKKHNFINQKFLFNKKKNIKYLNNDINDNNNIIKEIKIVNQ HHHHHHHHHHHHHHHHHHHCHHCCCCCHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHH IFHLNNYSIYKIMIPKEKIKWININDSYQNIKKKLLNIPYKIIILCNWKFNEVIGFIKKE HHHCCCCEEEEEEECCCCEEEEECCCHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHH KLINLINKNKNINNYIEYNSLIFVPDSLNIINIIKILRYSYNNIILINNRYGKVVGILTI HHHHHHHCCCCCCCEEEECCEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEHHHH KNLFQTVFGNFLDINNTPKIILNKKKWIMNGSIKLKNLEKILKINFKEVNYKCFSLADFL HHHHHHHCCCEEECCCCCCEEEECCEEEEECCEEHHHHHHHHHCCHHHCCCHHHHHHHHH IYKYKKIPKTGKIIIYKNYYFKILKSNLYKIYLIQIKKNDINTKNKRNY HHHHHCCCCCCCEEEEEHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCC >Mature Secondary Structure SSFLDPTIWMGLFTLVFLEIILSIDNVIFIAILSKKLPKNQQNKARYTGLIFALFMRFG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH LLGITSKLISLTKPIIINKFFIFSGKEIILLIGGIFLFIKTIFELFNHIYIFDKKKKKKD HHHHHHHHHHHHCCHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHEEEEECHHHHHH LRSSFWYIVIQIVILDVIFSIDSIMTAIGTTHNLFIMIIAVTISTILMIFLSKLLIKFIN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SKKSIITLCLSLLLMISLNLIIESLGFYISKKYLYISVEFSLFIEIINQIRINKKKKKES CCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEHHHHHHHHHHHHHCCHHHHHHH KKLFKKKILSLISYIIKKYNKKHNFINQKFLFNKKKNIKYLNNDINDNNNIIKEIKIVNQ HHHHHHHHHHHHHHHHHHHCHHCCCCCHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHH IFHLNNYSIYKIMIPKEKIKWININDSYQNIKKKLLNIPYKIIILCNWKFNEVIGFIKKE HHHCCCCEEEEEEECCCCEEEEECCCHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHH KLINLINKNKNINNYIEYNSLIFVPDSLNIINIIKILRYSYNNIILINNRYGKVVGILTI HHHHHHHCCCCCCCEEEECCEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEHHHH KNLFQTVFGNFLDINNTPKIILNKKKWIMNGSIKLKNLEKILKINFKEVNYKCFSLADFL HHHHHHHCCCEEECCCCCCEEEECCEEEEECCEEHHHHHHHHHCCHHHCCCHHHHHHHHH IYKYKKIPKTGKIIIYKNYYFKILKSNLYKIYLIQIKKNDINTKNKRNY HHHHHCCCCCCCEEEEEHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12522265 [H]