Definition | Buchnera aphidicola str. Cc (Cinara cedri), complete genome. |
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Accession | NC_008513 |
Length | 416,380 |
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The map label for this gene is fldA [H]
Identifier: 116515118
GI number: 116515118
Start: 213225
End: 213764
Strand: Reverse
Name: fldA [H]
Synonym: BCc_182
Alternate gene names: 116515118
Gene position: 213764-213225 (Counterclockwise)
Preceding gene: 116515124
Following gene: 116515116
Centisome position: 51.34
GC content: 19.26
Gene sequence:
>540_bases ATGAAAAAAATAGGTATTTTTTACGGAAGTGATACAGGAAACACAGAAAAAATTGCTTATAAAATACATAAACAATTGGG AAAAAATAATTCTAAAATATTCGATATTTCAGATTCTTCTTTAAAAAAAATTAAAAAATTTAATATTTTATTTTTTGGTA TACCTACATGGTATTATGGAGAATTACAATGTGATTGGCCAGATTCTTTATCTATTTTAAAAAAAATAGATTTAAAAAAT AAAATTATTGCTTTATTTGGTTGTGGAGATCAAAAAGATTATTCTGAATATTTTTGTGATTCTATTGGAATTATGTATGA TATTTTAAAAAAAAAAAATGCAAAATTAGTAGGAAAATGGTCTACAAAAAATTATAAATATGAATACTCTAAAGCACAAA AAAATAAATCATATTTTTTTGGATTACCAATTGATGAAGATAATCAATCAAAACTAACTAATAAAAGAATTAAAAAATGG TTACAATTAGTAATTCAAGAAATTAATAATATTTTAAAAAATAATTTTTTACATAAGTAA
Upstream 100 bases:
>100_bases ATTAGAATAATTTATTATAAAATAATAATAAATATTTTAATATTTTAAAAGTAATATTAATTATTTATTGATAAATTTTT TAAAATTTAATAGGTTTAAA
Downstream 100 bases:
>100_bases TAATCATTAGTTTTTAAAATAATAAAAATAAATATTTTTATTTATATAAAAATATTGATACTTGACAGTATCAAAATAAA TTATCTTGAATACTGTCATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MKKIGIFYGSDTGNTEKIAYKIHKQLGKNNSKIFDISDSSLKKIKKFNILFFGIPTWYYGELQCDWPDSLSILKKIDLKN KIIALFGCGDQKDYSEYFCDSIGIMYDILKKKNAKLVGKWSTKNYKYEYSKAQKNKSYFFGLPIDEDNQSKLTNKRIKKW LQLVIQEINNILKNNFLHK
Sequences:
>Translated_179_residues MKKIGIFYGSDTGNTEKIAYKIHKQLGKNNSKIFDISDSSLKKIKKFNILFFGIPTWYYGELQCDWPDSLSILKKIDLKN KIIALFGCGDQKDYSEYFCDSIGIMYDILKKKNAKLVGKWSTKNYKYEYSKAQKNKSYFFGLPIDEDNQSKLTNKRIKKW LQLVIQEINNILKNNFLHK >Mature_179_residues MKKIGIFYGSDTGNTEKIAYKIHKQLGKNNSKIFDISDSSLKKIKKFNILFFGIPTWYYGELQCDWPDSLSILKKIDLKN KIIALFGCGDQKDYSEYFCDSIGIMYDILKKKNAKLVGKWSTKNYKYEYSKAQKNKSYFFGLPIDEDNQSKLTNKRIKKW LQLVIQEINNILKNNFLHK
Specific function: Low-potential electron donor to a number of redox enzymes [H]
COG id: COG0716
COG function: function code C; Flavodoxins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 flavodoxin-like domain [H]
Homologues:
Organism=Escherichia coli, GI1786900, Length=169, Percent_Identity=50.2958579881657, Blast_Score=199, Evalue=6e-53, Organism=Escherichia coli, GI1789262, Length=166, Percent_Identity=37.9518072289157, Blast_Score=132, Evalue=1e-32,
Paralogues:
None
Copy number: 242 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008254 - InterPro: IPR001226 - InterPro: IPR010086 [H]
Pfam domain/function: PF00258 Flavodoxin_1 [H]
EC number: NA
Molecular weight: Translated: 21010; Mature: 21010
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: PS00201 FLAVODOXIN ; PS50902 FLAVODOXIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIGIFYGSDTGNTEKIAYKIHKQLGKNNSKIFDISDSSLKKIKKFNILFFGIPTWYYG CCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHEEEEEECCCEEEC ELQCDWPDSLSILKKIDLKNKIIALFGCGDQKDYSEYFCDSIGIMYDILKKKNAKLVGKW CEEECCCHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEE STKNYKYEYSKAQKNKSYFFGLPIDEDNQSKLTNKRIKKWLQLVIQEINNILKNNFLHK CCCCEEEEHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKKIGIFYGSDTGNTEKIAYKIHKQLGKNNSKIFDISDSSLKKIKKFNILFFGIPTWYYG CCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHEEEEEECCCEEEC ELQCDWPDSLSILKKIDLKNKIIALFGCGDQKDYSEYFCDSIGIMYDILKKKNAKLVGKW CEEECCCHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEE STKNYKYEYSKAQKNKSYFFGLPIDEDNQSKLTNKRIKKWLQLVIQEINNILKNNFLHK CCCCEEEEHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FMN. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10993077 [H]