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The map label for this gene is frr

Identifier: 116515085

GI number: 116515085

Start: 169814

End: 170371

Strand: Direct

Name: frr

Synonym: BCc_145

Alternate gene names: 116515085

Gene position: 169814-170371 (Clockwise)

Preceding gene: 116515084

Following gene: 116515086

Centisome position: 40.78

GC content: 17.74

Gene sequence:

>558_bases
ATGATTAACGTTTTACAAGAAAAAACTTATATTAAAATGAATAAATGTGTTTTAAATTTTAAAAATGATTTAAATAAAAT
TCGAGCAAATAGAGCAACTCCAGAATTATTAGATAATATTTTTATAGATTATTATGGTACACATACGGCTTTATCAAAAT
TATCAAATATAATAATAGAAAATAATTCTACATTAAAAATTTCTTTATTTGATATTTCTATTAAAAATTCTGTTGAAAAA
TCAATTATTAATTCTAATTTAGGTTTAAATCCTATTTCTTCTGATTCTAATATAAGAATTAAAATACCTGCATTAACTGA
GCAAAGAAGAAAAGATATCGTAAAAATAATTAAAAATGATGCAGAAAATACTCGTATTTCTATAAGAAATATAAGAAGAG
AAGCTAATATTCAAATAAAAACTTTATTAAAAGAAAAAGAAATAAATCAAGATATAGAAAAACAAGTAAAATTAGAAATT
CAAAGATATACAAATTTATTTATTAAAAAAATAAATGATATTTTATCTATTAAAGAAAAAGAGTTATTAACAATATAA

Upstream 100 bases:

>100_bases
TAAAATTATTATAGAAAAAAGTAATATTGGAACTTTAATTAAATAATAATTTTTAATGATTTTTCATCAATTATAATTAT
AATAAGAATGAGATTATTTT

Downstream 100 bases:

>100_bases
TATATAAATATTATATAAATAATGTATACATTTTTCTAATTATATTTATTTTAATAAATATTTTTGTTTATTTAATTTTA
TTAATAATAATATTTTAATT

Product: hypothetical protein

Products: NA

Alternate protein names: RRF; Ribosome-releasing factor

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MINVLQEKTYIKMNKCVLNFKNDLNKIRANRATPELLDNIFIDYYGTHTALSKLSNIIIENNSTLKISLFDISIKNSVEK
SIINSNLGLNPISSDSNIRIKIPALTEQRRKDIVKIIKNDAENTRISIRNIRREANIQIKTLLKEKEINQDIEKQVKLEI
QRYTNLFIKKINDILSIKEKELLTI

Sequences:

>Translated_185_residues
MINVLQEKTYIKMNKCVLNFKNDLNKIRANRATPELLDNIFIDYYGTHTALSKLSNIIIENNSTLKISLFDISIKNSVEK
SIINSNLGLNPISSDSNIRIKIPALTEQRRKDIVKIIKNDAENTRISIRNIRREANIQIKTLLKEKEINQDIEKQVKLEI
QRYTNLFIKKINDILSIKEKELLTI
>Mature_185_residues
MINVLQEKTYIKMNKCVLNFKNDLNKIRANRATPELLDNIFIDYYGTHTALSKLSNIIIENNSTLKISLFDISIKNSVEK
SIINSNLGLNPISSDSNIRIKIPALTEQRRKDIVKIIKNDAENTRISIRNIRREANIQIKTLLKEKEINQDIEKQVKLEI
QRYTNLFIKKINDILSIKEKELLTI

Specific function: Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another

COG id: COG0233

COG function: function code J; Ribosome recycling factor

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RRF family

Homologues:

Organism=Escherichia coli, GI1786368, Length=183, Percent_Identity=46.448087431694, Blast_Score=192, Evalue=9e-51,

Paralogues:

None

Copy number: 840 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): RRF_BUCCC (Q057S8)

Other databases:

- EMBL:   CP000263
- RefSeq:   YP_802714.1
- ProteinModelPortal:   Q057S8
- SMR:   Q057S8
- STRING:   Q057S8
- EnsemblBacteria:   EBBUCT00000001521
- GeneID:   4440886
- GenomeReviews:   CP000263_GR
- KEGG:   bcc:BCc_145
- eggNOG:   COG0233
- GeneTree:   EBGT00050000007965
- HOGENOM:   HBG533975
- OMA:   YYGAETP
- BioCyc:   BAPH372461:BCC_145-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00040
- InterPro:   IPR002661
- InterPro:   IPR015998
- PANTHER:   PTHR20982
- PANTHER:   PTHR20982:SF3
- TIGRFAMs:   TIGR00496

Pfam domain/function: PF01765 RRF; SSF55194 Ribosome_recyc_fac

EC number: NA

Molecular weight: Translated: 21492; Mature: 21492

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINVLQEKTYIKMNKCVLNFKNDLNKIRANRATPELLDNIFIDYYGTHTALSKLSNIIIE
CCCCCCHHHHEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHEEEE
NNSTLKISLFDISIKNSVEKSIINSNLGLNPISSDSNIRIKIPALTEQRRKDIVKIIKND
CCCEEEEEEEEEEHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCC
AENTRISIRNIRREANIQIKTLLKEKEINQDIEKQVKLEIQRYTNLFIKKINDILSIKEK
CCCCEEHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
ELLTI
HHCCC
>Mature Secondary Structure
MINVLQEKTYIKMNKCVLNFKNDLNKIRANRATPELLDNIFIDYYGTHTALSKLSNIIIE
CCCCCCHHHHEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHEEEE
NNSTLKISLFDISIKNSVEKSIINSNLGLNPISSDSNIRIKIPALTEQRRKDIVKIIKND
CCCEEEEEEEEEEHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCC
AENTRISIRNIRREANIQIKTLLKEKEINQDIEKQVKLEIQRYTNLFIKKINDILSIKEK
CCCCEEHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
ELLTI
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA