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The map label for this gene is ychA [C]

Identifier: 116515054

GI number: 116515054

Start: 129388

End: 130197

Strand: Direct

Name: ychA [C]

Synonym: BCc_113

Alternate gene names: 116515054

Gene position: 129388-130197 (Clockwise)

Preceding gene: 116515053

Following gene: 116515055

Centisome position: 31.07

GC content: 17.9

Gene sequence:

>810_bases
ATGATGGATTTAAAAGATATTGTTTCATCTGATTTACCATTATTTGAAATTTTTATAAAGATAATGGAAAAAATTCGTTT
TGATTTTTTAGGAGAAAAAATAATTAGTTTATGTAAAAAAAAAATACAAGAATTTTCATTAATTATTTCTAATAAATTAT
CTAAAATAGATCAATTAAAAAAATTGTTGTTTTTATTTTATAAACAATGGAATTTTGGTATTTTAAATAAAAAATATAAA
TTATCTAATATGTTATGGTTAGATAAAGTTTTTATTCATAAAATAGGATGTTCTTTTTCTTTAGGGATTATTTTAATGTA
TATTGCTAATCAATTAAAATTATTTATGTTACCAATAATTTTTCCTACTCAATTAATTTTGAAATTTGTTGATTTAGAAA
AGAAAATTTTTTATATTAATCCTACAAATGGAGAATTTTTAAATAAAAATATTTTGAAGAAATGGTTACAAGGTAATATT
AGTCCGATGTCTAAATTAGATAAAAAAGATTTGTATGAAGCTAATTCTTTAGAAATTATAAAAAAAGTTTTAGACTTATT
AAAAATTTCTTTAATTGAAGAAAAAAATATAGAATTAGCTTTAAATGTTAGTAATATTTTATTAAAATTAAAGCCTAAAG
ATCCTTATGAAATAAGAGATAGAGGATTAATTTTTTCTCAATTAAATTGTTTTCATATAGCTATTCCAGATTTAATATAT
TTTGTTGAACAATGTCCTGAAGATCCTATTAGTGATATTATTAAAATGCAAATTCATACAATTAAACAAAAAAAAATTGT
TTTTCATTAA

Upstream 100 bases:

>100_bases
TTGTATCTGTAAAAGATTATTCTAATAGAAATAGAATTACTTATGGTTATTTAAATAAATAAGAATAATGTTATTTATAT
TAATTTTTTAAGGATTATTT

Downstream 100 bases:

>100_bases
TATTTATTAATATGATTTTATTTTAAAATATTAATATAATATTTATTATAAATTTTATTTACTATTTTTCTACTTCCTTC
TATATTTTTAGAGATATTTA

Product: YchA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MMDLKDIVSSDLPLFEIFIKIMEKIRFDFLGEKIISLCKKKIQEFSLIISNKLSKIDQLKKLLFLFYKQWNFGILNKKYK
LSNMLWLDKVFIHKIGCSFSLGIILMYIANQLKLFMLPIIFPTQLILKFVDLEKKIFYINPTNGEFLNKNILKKWLQGNI
SPMSKLDKKDLYEANSLEIIKKVLDLLKISLIEEKNIELALNVSNILLKLKPKDPYEIRDRGLIFSQLNCFHIAIPDLIY
FVEQCPEDPISDIIKMQIHTIKQKKIVFH

Sequences:

>Translated_269_residues
MMDLKDIVSSDLPLFEIFIKIMEKIRFDFLGEKIISLCKKKIQEFSLIISNKLSKIDQLKKLLFLFYKQWNFGILNKKYK
LSNMLWLDKVFIHKIGCSFSLGIILMYIANQLKLFMLPIIFPTQLILKFVDLEKKIFYINPTNGEFLNKNILKKWLQGNI
SPMSKLDKKDLYEANSLEIIKKVLDLLKISLIEEKNIELALNVSNILLKLKPKDPYEIRDRGLIFSQLNCFHIAIPDLIY
FVEQCPEDPISDIIKMQIHTIKQKKIVFH
>Mature_269_residues
MMDLKDIVSSDLPLFEIFIKIMEKIRFDFLGEKIISLCKKKIQEFSLIISNKLSKIDQLKKLLFLFYKQWNFGILNKKYK
LSNMLWLDKVFIHKIGCSFSLGIILMYIANQLKLFMLPIIFPTQLILKFVDLEKKIFYINPTNGEFLNKNILKKWLQGNI
SPMSKLDKKDLYEANSLEIIKKVLDLLKISLIEEKNIELALNVSNILLKLKPKDPYEIRDRGLIFSQLNCFHIAIPDLIY
FVEQCPEDPISDIIKMQIHTIKQKKIVFH

Specific function: Unknown

COG id: COG2912

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0162 family [H]

Homologues:

Organism=Escherichia coli, GI1787465, Length=276, Percent_Identity=47.8260869565217, Blast_Score=255, Evalue=2e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31717; Mature: 31717

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDLKDIVSSDLPLFEIFIKIMEKIRFDFLGEKIISLCKKKIQEFSLIISNKLSKIDQLK
CCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLLFLFYKQWNFGILNKKYKLSNMLWLDKVFIHKIGCSFSLGIILMYIANQLKLFMLPII
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
FPTQLILKFVDLEKKIFYINPTNGEFLNKNILKKWLQGNISPMSKLDKKDLYEANSLEII
HHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHCCHHHHHCCCHHHHH
KKVLDLLKISLIEEKNIELALNVSNILLKLKPKDPYEIRDRGLIFSQLNCFHIAIPDLIY
HHHHHHHHHHHHHCCCCEEEEEHHHEEEEECCCCCHHHHHCCEEHHHCCCCEEHHHHHHH
FVEQCPEDPISDIIKMQIHTIKQKKIVFH
HHHHCCCCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MMDLKDIVSSDLPLFEIFIKIMEKIRFDFLGEKIISLCKKKIQEFSLIISNKLSKIDQLK
CCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLLFLFYKQWNFGILNKKYKLSNMLWLDKVFIHKIGCSFSLGIILMYIANQLKLFMLPII
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
FPTQLILKFVDLEKKIFYINPTNGEFLNKNILKKWLQGNISPMSKLDKKDLYEANSLEII
HHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHCCHHHHHCCCHHHHH
KKVLDLLKISLIEEKNIELALNVSNILLKLKPKDPYEIRDRGLIFSQLNCFHIAIPDLIY
HHHHHHHHHHHHHCCCCEEEEEHHHEEEEECCCCCHHHHHCCEEHHHCCCCEEHHHHHHH
FVEQCPEDPISDIIKMQIHTIKQKKIVFH
HHHHCCCCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10993077 [H]