Definition | Buchnera aphidicola str. Cc (Cinara cedri), complete genome. |
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Accession | NC_008513 |
Length | 416,380 |
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The map label for this gene is aroH [H]
Identifier: 116515018
GI number: 116515018
Start: 84313
End: 85365
Strand: Direct
Name: aroH [H]
Synonym: BCc_077
Alternate gene names: 116515018
Gene position: 84313-85365 (Clockwise)
Preceding gene: 116515016
Following gene: 116515019
Centisome position: 20.25
GC content: 24.69
Gene sequence:
>1053_bases ATGAAAAAAAATAATGAATTTAAAAATTTTAGAAAACAAAAAGATTTGTTAATTACTCCAGATGTTTTATTTAAAAAATA TACTTCAAATTCTAATATATCTAATTTAGTTAAATTAACAAGAAATAATATAAAAAATATTTTATTAGGTAAAGATAAAA GATTATTAGTAATAATTGGACCATGTTCTATTCATGATACGAGAGCAACTATAGAATATGCAAAAAAAATTAAAGTTTTT CGTAAAAAATATTCTTCTCGTTTAGAAATTGTCATGAGGACTTATTTTGAAAAACCACGTACTGTATTAGGTTGGACTGG ATTAATTTCTGATCCTGATTTAGATGGTACACTAAATATTAATAAAGGATTATCTTTGGCTAGAAAATTATTATTAAAAA TTAATAAATTAGGTGTTCCGACTGCAACTGAATTTTTAGACCCTTTAATTAGTTTTTTTATTTCTGATTTAATTAGCTGG GGAGCTATAGGAGCTAGAACTACGGAAAGTCAAATTCATAGAGAATTAGCTTCTCATTTGTCTTGTCCTGTTGGTTTTAA AAATGGTACTGATGGTAATGTTTTAATTGCTATTGATGCAATTCGATCAGCACAAGCAAGTCATTTATTTTTATCGTCTG ATAAATTTGGAAAAGTTATAATTAATCATACTTTAGGAAATTCATGTGCACATATTATTATGCGGGGAGGAAAATTACCA AACTATTATAAAAAAGATATTGATGATGTAATAAAAAAATTAAAGATTTTTAATCTTCCAGAACATTTAATTATTGATTT TAGTCATTCTAATTCTTTTAAAAATCATAAAAAACAATTAGATGTTGCTGCTTCTGTCTGTAAACAAATTTTTGAAGGAT CGACTGCTATCTCTGGAGTTATGATTGAAAGTTTTTTAAAAGAAGGTACACAGATAGTACATAATAAAACAGATTTAATA TATGGTCAGTCTATTACTGATTCTTGTATAAATTTAAAAGATAGCTCAGATATATTAAAACAATTATTTAATGCTGTAAA AATACGTTTTTAA
Upstream 100 bases:
>100_bases TTTTGAAAATATTAAGTAAATAAATATATAATATTTATATTTTTATAAGTTTAAATTTTTCATGTATAATTTAATTTTTA TAAATTTGGTAGAGAGAAAA
Downstream 100 bases:
>100_bases TTTTTTAATTTTAATAAAAAATAATTTTTTATATAATAAATAATTTTATAAAAAAAATATTTTTTATAAATTTCATTTAT TATAAAAGATATTATATGTA
Product: phospho-2-dehydro-3-deoxyheptonate aldolase
Products: NA
Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MKKNNEFKNFRKQKDLLITPDVLFKKYTSNSNISNLVKLTRNNIKNILLGKDKRLLVIIGPCSIHDTRATIEYAKKIKVF RKKYSSRLEIVMRTYFEKPRTVLGWTGLISDPDLDGTLNINKGLSLARKLLLKINKLGVPTATEFLDPLISFFISDLISW GAIGARTTESQIHRELASHLSCPVGFKNGTDGNVLIAIDAIRSAQASHLFLSSDKFGKVIINHTLGNSCAHIIMRGGKLP NYYKKDIDDVIKKLKIFNLPEHLIIDFSHSNSFKNHKKQLDVAASVCKQIFEGSTAISGVMIESFLKEGTQIVHNKTDLI YGQSITDSCINLKDSSDILKQLFNAVKIRF
Sequences:
>Translated_350_residues MKKNNEFKNFRKQKDLLITPDVLFKKYTSNSNISNLVKLTRNNIKNILLGKDKRLLVIIGPCSIHDTRATIEYAKKIKVF RKKYSSRLEIVMRTYFEKPRTVLGWTGLISDPDLDGTLNINKGLSLARKLLLKINKLGVPTATEFLDPLISFFISDLISW GAIGARTTESQIHRELASHLSCPVGFKNGTDGNVLIAIDAIRSAQASHLFLSSDKFGKVIINHTLGNSCAHIIMRGGKLP NYYKKDIDDVIKKLKIFNLPEHLIIDFSHSNSFKNHKKQLDVAASVCKQIFEGSTAISGVMIESFLKEGTQIVHNKTDLI YGQSITDSCINLKDSSDILKQLFNAVKIRF >Mature_350_residues MKKNNEFKNFRKQKDLLITPDVLFKKYTSNSNISNLVKLTRNNIKNILLGKDKRLLVIIGPCSIHDTRATIEYAKKIKVF RKKYSSRLEIVMRTYFEKPRTVLGWTGLISDPDLDGTLNINKGLSLARKLLLKINKLGVPTATEFLDPLISFFISDLISW GAIGARTTESQIHRELASHLSCPVGFKNGTDGNVLIAIDAIRSAQASHLFLSSDKFGKVIINHTLGNSCAHIIMRGGKLP NYYKKDIDDVIKKLKIFNLPEHLIIDFSHSNSFKNHKKQLDVAASVCKQIFEGSTAISGVMIESFLKEGTQIVHNKTDLI YGQSITDSCINLKDSSDILKQLFNAVKIRF
Specific function: Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) [H]
COG id: COG0722
COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I DAHP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1787996, Length=350, Percent_Identity=58.8571428571429, Blast_Score=439, Evalue=1e-124, Organism=Escherichia coli, GI1786969, Length=349, Percent_Identity=53.8681948424069, Blast_Score=377, Evalue=1e-106, Organism=Escherichia coli, GI1788953, Length=330, Percent_Identity=44.8484848484849, Blast_Score=315, Evalue=3e-87, Organism=Saccharomyces cerevisiae, GI6319726, Length=338, Percent_Identity=45.8579881656805, Blast_Score=296, Evalue=4e-81, Organism=Saccharomyces cerevisiae, GI6320240, Length=348, Percent_Identity=44.2528735632184, Blast_Score=275, Evalue=9e-75,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006218 - InterPro: IPR006219 [H]
Pfam domain/function: PF00793 DAHP_synth_1 [H]
EC number: =2.5.1.54 [H]
Molecular weight: Translated: 39364; Mature: 39364
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNNEFKNFRKQKDLLITPDVLFKKYTSNSNISNLVKLTRNNIKNILLGKDKRLLVIIG CCCCCHHHHHHHHCCEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEC PCSIHDTRATIEYAKKIKVFRKKYSSRLEIVMRTYFEKPRTVLGWTGLISDPDLDGTLNI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEC NKGLSLARKLLLKINKLGVPTATEFLDPLISFFISDLISWGAIGARTTESQIHRELASHL CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHC SCPVGFKNGTDGNVLIAIDAIRSAQASHLFLSSDKFGKVIINHTLGNSCAHIIMRGGKLP CCCCCCCCCCCCCEEEEEECHHCCCCCEEEECCCCCCEEEEECCCCHHHHHHHHCCCCCC NYYKKDIDDVIKKLKIFNLPEHLIIDFSHSNSFKNHKKQLDVAASVCKQIFEGSTAISGV CHHHHHHHHHHHHHHHCCCCHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH MIESFLKEGTQIVHNKTDLIYGQSITDSCINLKDSSDILKQLFNAVKIRF HHHHHHHHHHHHHHCCCCEEECCCHHHHHHCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MKKNNEFKNFRKQKDLLITPDVLFKKYTSNSNISNLVKLTRNNIKNILLGKDKRLLVIIG CCCCCHHHHHHHHCCEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEC PCSIHDTRATIEYAKKIKVFRKKYSSRLEIVMRTYFEKPRTVLGWTGLISDPDLDGTLNI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEC NKGLSLARKLLLKINKLGVPTATEFLDPLISFFISDLISWGAIGARTTESQIHRELASHL CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHC SCPVGFKNGTDGNVLIAIDAIRSAQASHLFLSSDKFGKVIINHTLGNSCAHIIMRGGKLP CCCCCCCCCCCCCEEEEEECHHCCCCCEEEECCCCCCEEEEECCCCHHHHHHHHCCCCCC NYYKKDIDDVIKKLKIFNLPEHLIIDFSHSNSFKNHKKQLDVAASVCKQIFEGSTAISGV CHHHHHHHHHHHHHHHCCCCHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH MIESFLKEGTQIVHNKTDLIYGQSITDSCINLKDSSDILKQLFNAVKIRF HHHHHHHHHHHHHHCCCCEEECCCHHHHHHCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12522265 [H]