Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116493513

Identifier: 116493513

GI number: 116493513

Start: 1762030

End: 1763835

Strand: Reverse

Name: 116493513

Synonym: PEPE_1785

Alternate gene names: NA

Gene position: 1763835-1762030 (Counterclockwise)

Preceding gene: 116493514

Following gene: 116493511

Centisome position: 96.26

GC content: 38.76

Gene sequence:

>1806_bases
ATGAAATTTTTTACGAAAAGAACGTTCCTATTGTTAGTCACGATGCTAACCTTCGGTATTTTTTGGAATGTTAAGACAGT
TAAGGCGGATTACGAAATTTCACAATTTAGAATGCAGATTAATGTAAATAAGGATGGGAGCGCCAACATCAATCAAAGTG
TTTTGTACGACTTTGATGATGATTATCATGGAGTTTATTTGACTCAAGATTTAAGAGGAACTGCGGGAGCAGAATTAGAG
GGGATTACCGTTTCTAATAACAAGGGAACCCAAAACCAAGTTCCTATTAATAACAGCGGTGAAAATTTAACTGCTAAAGT
TGAATCAAGTAAAAAGCAAATGAAAATTAGGGTTTATAATGCTGTATCAAGTGATGACCAAACCAAAATTACGTACCATT
ATCGGATTAACGGGGTGGTGACCAACTACAAAGATACAGCTGAAATTAATTGGAAAGTAATTGGATCGGGTTGGGACGTA
CCCTTAGAGGATGCGCAAGTCACCATTAAATTACCTGGAAAGAATGTTAAAGGACTTCATGCTTGGTCTCATGGGGAGGC
TGCAGGCTACACTACGGTGGATAAAGCTAAAGGTAAAGTAACTTTAGATATAGGAGACAATCCAGAGAACACTTTTGTGG
AAGCACATATGGTATTCCCCACGGCTTTAACTCCCGATAATAAAAAAATTGTTAATCAAAATCATCTAGCAGCAGTAAAA
AAACAGGAATATCAACTGGTAAAGCGTGAAAATGAAGCCCAAGCAAGAGCTCAACGCATTGCGGCTTATGCTAAAATTAC
CAGTGCCATCATAAGTGTACTGATTTTAATCGGTATGATGGGTTGGTTAAAAAAACATGGATATCATCAATATGATATCC
CGACGCCCATGGAACATAGTTTTGACGTCCCAAGCATCTCACCAGCAGAGGCAGAAGCGCTATTTAACAAGAGTAAAGCT
GATACTAAGGGTGTTTCTGCTGAAATGTTAGTTTTGGCGGCTGAAGGTAAATTGAAGTTCAAACAGATTCCCTATGGCAA
GCGAGGTAAGGAAACCACTGAAATTGAGCGTCAAGGTAAATTCAACATGTCCTTTGTTGATCGCTGCTTGGACCGCATTG
GTGATGGTCAACAAGTTACTATCAAGCAAATTAATGATTATGCTAAAAAAGACAAGAAGAATAATGTAGCTACATGGTAC
AAGGAGTGGCAGTCCGAGGTTGATACCAATTTAGCCCGCTTTAAAGATACGTATAATATTAGTTATCGTCATGGACTGCT
TGGGCTAGCAATTGCTACTCCAATCCTTGCTTTCATAGTAGGAATTATCGGAAGATTTGGGGAAGCAACTAACTTGTACT
GGATAGGCGGAATAGTCTTAACGTTGATAATTGAAGCTTGGGTTTTAGCTACTTGGGATAAGGTTTCAATGTATAACGAG
GCTGGATTGCAGCAATATAATCAAATCCGAGGATTTAAACAGATGATGAAAGATATTGCTCATTTTAATACGGCTGAGAT
TGGTGACCTAATTCTTTGGGAACAAATTTTGCCATATGCCACCGCTTTTGGGTTGGCAGAAAAGGTTGCTAAAAAACTAA
AGACGGATTTTGGAACTCAATTAAATGAAAATGTTCCATTTTATGCCTACTATTATGGAATCAATGGAATGCATGTAGGT
ATTGCTAACAGTATTAGTACTTCTATTTCACACTCAGTATCAGCTAGTTCCAGTGGTTCGTCCGGCGGATTTAGTGGAGG
TAGTTCTGGTGGTTTTGGAGGAGGTTCCGGTGGTGGAGCTTTTTAA

Upstream 100 bases:

>100_bases
AACTCTGAAACAGATTCTACCATCGTCCGCACCTGCTCACGTATGCTATACTTTGACTAACATTTAACGGGGATTATTGA
ACAATTTTTGGGGGAGTAAT

Downstream 100 bases:

>100_bases
ACTTTAATTCGTTAAATTTGACACTGCTGAAGTAATAGCGTAAGGTTGAAGATGTTGCTTCGGGTACAGGAGCAAAGGGT
ATTATTAATTATGTTTTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 601; Mature: 601

Protein sequence:

>601_residues
MKFFTKRTFLLLVTMLTFGIFWNVKTVKADYEISQFRMQINVNKDGSANINQSVLYDFDDDYHGVYLTQDLRGTAGAELE
GITVSNNKGTQNQVPINNSGENLTAKVESSKKQMKIRVYNAVSSDDQTKITYHYRINGVVTNYKDTAEINWKVIGSGWDV
PLEDAQVTIKLPGKNVKGLHAWSHGEAAGYTTVDKAKGKVTLDIGDNPENTFVEAHMVFPTALTPDNKKIVNQNHLAAVK
KQEYQLVKRENEAQARAQRIAAYAKITSAIISVLILIGMMGWLKKHGYHQYDIPTPMEHSFDVPSISPAEAEALFNKSKA
DTKGVSAEMLVLAAEGKLKFKQIPYGKRGKETTEIERQGKFNMSFVDRCLDRIGDGQQVTIKQINDYAKKDKKNNVATWY
KEWQSEVDTNLARFKDTYNISYRHGLLGLAIATPILAFIVGIIGRFGEATNLYWIGGIVLTLIIEAWVLATWDKVSMYNE
AGLQQYNQIRGFKQMMKDIAHFNTAEIGDLILWEQILPYATAFGLAEKVAKKLKTDFGTQLNENVPFYAYYYGINGMHVG
IANSISTSISHSVSASSSGSSGGFSGGSSGGFGGGSGGGAF

Sequences:

>Translated_601_residues
MKFFTKRTFLLLVTMLTFGIFWNVKTVKADYEISQFRMQINVNKDGSANINQSVLYDFDDDYHGVYLTQDLRGTAGAELE
GITVSNNKGTQNQVPINNSGENLTAKVESSKKQMKIRVYNAVSSDDQTKITYHYRINGVVTNYKDTAEINWKVIGSGWDV
PLEDAQVTIKLPGKNVKGLHAWSHGEAAGYTTVDKAKGKVTLDIGDNPENTFVEAHMVFPTALTPDNKKIVNQNHLAAVK
KQEYQLVKRENEAQARAQRIAAYAKITSAIISVLILIGMMGWLKKHGYHQYDIPTPMEHSFDVPSISPAEAEALFNKSKA
DTKGVSAEMLVLAAEGKLKFKQIPYGKRGKETTEIERQGKFNMSFVDRCLDRIGDGQQVTIKQINDYAKKDKKNNVATWY
KEWQSEVDTNLARFKDTYNISYRHGLLGLAIATPILAFIVGIIGRFGEATNLYWIGGIVLTLIIEAWVLATWDKVSMYNE
AGLQQYNQIRGFKQMMKDIAHFNTAEIGDLILWEQILPYATAFGLAEKVAKKLKTDFGTQLNENVPFYAYYYGINGMHVG
IANSISTSISHSVSASSSGSSGGFSGGSSGGFGGGSGGGAF
>Mature_601_residues
MKFFTKRTFLLLVTMLTFGIFWNVKTVKADYEISQFRMQINVNKDGSANINQSVLYDFDDDYHGVYLTQDLRGTAGAELE
GITVSNNKGTQNQVPINNSGENLTAKVESSKKQMKIRVYNAVSSDDQTKITYHYRINGVVTNYKDTAEINWKVIGSGWDV
PLEDAQVTIKLPGKNVKGLHAWSHGEAAGYTTVDKAKGKVTLDIGDNPENTFVEAHMVFPTALTPDNKKIVNQNHLAAVK
KQEYQLVKRENEAQARAQRIAAYAKITSAIISVLILIGMMGWLKKHGYHQYDIPTPMEHSFDVPSISPAEAEALFNKSKA
DTKGVSAEMLVLAAEGKLKFKQIPYGKRGKETTEIERQGKFNMSFVDRCLDRIGDGQQVTIKQINDYAKKDKKNNVATWY
KEWQSEVDTNLARFKDTYNISYRHGLLGLAIATPILAFIVGIIGRFGEATNLYWIGGIVLTLIIEAWVLATWDKVSMYNE
AGLQQYNQIRGFKQMMKDIAHFNTAEIGDLILWEQILPYATAFGLAEKVAKKLKTDFGTQLNENVPFYAYYYGINGMHVG
IANSISTSISHSVSASSSGSSGGFSGGSSGGFGGGSGGGAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66540; Mature: 66540

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFFTKRTFLLLVTMLTFGIFWNVKTVKADYEISQFRMQINVNKDGSANINQSVLYDFDD
CCCCHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEEEEEEECCCCCCCCCCCEEEECCC
DYHGVYLTQDLRGTAGAELEGITVSNNKGTQNQVPINNSGENLTAKVESSKKQMKIRVYN
CCCCEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEE
AVSSDDQTKITYHYRINGVVTNYKDTAEINWKVIGSGWDVPLEDAQVTIKLPGKNVKGLH
ECCCCCCEEEEEEEEEEEEEECCCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCCEE
AWSHGEAAGYTTVDKAKGKVTLDIGDNPENTFVEAHMVFPTALTPDNKKIVNQNHLAAVK
CCCCCCCCCCCEEECCCCEEEEEECCCCCCCEEEEEEEEEEEECCCCCHHCCCHHHHHHH
KQEYQLVKRENEAQARAQRIAAYAKITSAIISVLILIGMMGWLKKHGYHQYDIPTPMEHS
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
FDVPSISPAEAEALFNKSKADTKGVSAEMLVLAAEGKLKFKQIPYGKRGKETTEIERQGK
CCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEEECCCEEEEECCCCCCCCCCHHHHHCCC
FNMSFVDRCLDRIGDGQQVTIKQINDYAKKDKKNNVATWYKEWQSEVDTNLARFKDTYNI
CCHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEE
SYRHGLLGLAIATPILAFIVGIIGRFGEATNLYWIGGIVLTLIIEAWVLATWDKVSMYNE
EHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHCCHHHHHHHH
AGLQQYNQIRGFKQMMKDIAHFNTAEIGDLILWEQILPYATAFGLAEKVAKKLKTDFGTQ
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LNENVPFYAYYYGINGMHVGIANSISTSISHSVSASSSGSSGGFSGGSSGGFGGGSGGGA
CCCCCCEEEEEECCCCEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
F
C
>Mature Secondary Structure
MKFFTKRTFLLLVTMLTFGIFWNVKTVKADYEISQFRMQINVNKDGSANINQSVLYDFDD
CCCCHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEEEEEEECCCCCCCCCCCEEEECCC
DYHGVYLTQDLRGTAGAELEGITVSNNKGTQNQVPINNSGENLTAKVESSKKQMKIRVYN
CCCCEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEE
AVSSDDQTKITYHYRINGVVTNYKDTAEINWKVIGSGWDVPLEDAQVTIKLPGKNVKGLH
ECCCCCCEEEEEEEEEEEEEECCCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCCEE
AWSHGEAAGYTTVDKAKGKVTLDIGDNPENTFVEAHMVFPTALTPDNKKIVNQNHLAAVK
CCCCCCCCCCCEEECCCCEEEEEECCCCCCCEEEEEEEEEEEECCCCCHHCCCHHHHHHH
KQEYQLVKRENEAQARAQRIAAYAKITSAIISVLILIGMMGWLKKHGYHQYDIPTPMEHS
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
FDVPSISPAEAEALFNKSKADTKGVSAEMLVLAAEGKLKFKQIPYGKRGKETTEIERQGK
CCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEEECCCEEEEECCCCCCCCCCHHHHHCCC
FNMSFVDRCLDRIGDGQQVTIKQINDYAKKDKKNNVATWYKEWQSEVDTNLARFKDTYNI
CCHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEE
SYRHGLLGLAIATPILAFIVGIIGRFGEATNLYWIGGIVLTLIIEAWVLATWDKVSMYNE
EHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHCCHHHHHHHH
AGLQQYNQIRGFKQMMKDIAHFNTAEIGDLILWEQILPYATAFGLAEKVAKKLKTDFGTQ
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LNENVPFYAYYYGINGMHVGIANSISTSISHSVSASSSGSSGGFSGGSSGGFGGGSGGGA
CCCCCCEEEEEECCCCEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
F
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA