| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116493513
Identifier: 116493513
GI number: 116493513
Start: 1762030
End: 1763835
Strand: Reverse
Name: 116493513
Synonym: PEPE_1785
Alternate gene names: NA
Gene position: 1763835-1762030 (Counterclockwise)
Preceding gene: 116493514
Following gene: 116493511
Centisome position: 96.26
GC content: 38.76
Gene sequence:
>1806_bases ATGAAATTTTTTACGAAAAGAACGTTCCTATTGTTAGTCACGATGCTAACCTTCGGTATTTTTTGGAATGTTAAGACAGT TAAGGCGGATTACGAAATTTCACAATTTAGAATGCAGATTAATGTAAATAAGGATGGGAGCGCCAACATCAATCAAAGTG TTTTGTACGACTTTGATGATGATTATCATGGAGTTTATTTGACTCAAGATTTAAGAGGAACTGCGGGAGCAGAATTAGAG GGGATTACCGTTTCTAATAACAAGGGAACCCAAAACCAAGTTCCTATTAATAACAGCGGTGAAAATTTAACTGCTAAAGT TGAATCAAGTAAAAAGCAAATGAAAATTAGGGTTTATAATGCTGTATCAAGTGATGACCAAACCAAAATTACGTACCATT ATCGGATTAACGGGGTGGTGACCAACTACAAAGATACAGCTGAAATTAATTGGAAAGTAATTGGATCGGGTTGGGACGTA CCCTTAGAGGATGCGCAAGTCACCATTAAATTACCTGGAAAGAATGTTAAAGGACTTCATGCTTGGTCTCATGGGGAGGC TGCAGGCTACACTACGGTGGATAAAGCTAAAGGTAAAGTAACTTTAGATATAGGAGACAATCCAGAGAACACTTTTGTGG AAGCACATATGGTATTCCCCACGGCTTTAACTCCCGATAATAAAAAAATTGTTAATCAAAATCATCTAGCAGCAGTAAAA AAACAGGAATATCAACTGGTAAAGCGTGAAAATGAAGCCCAAGCAAGAGCTCAACGCATTGCGGCTTATGCTAAAATTAC CAGTGCCATCATAAGTGTACTGATTTTAATCGGTATGATGGGTTGGTTAAAAAAACATGGATATCATCAATATGATATCC CGACGCCCATGGAACATAGTTTTGACGTCCCAAGCATCTCACCAGCAGAGGCAGAAGCGCTATTTAACAAGAGTAAAGCT GATACTAAGGGTGTTTCTGCTGAAATGTTAGTTTTGGCGGCTGAAGGTAAATTGAAGTTCAAACAGATTCCCTATGGCAA GCGAGGTAAGGAAACCACTGAAATTGAGCGTCAAGGTAAATTCAACATGTCCTTTGTTGATCGCTGCTTGGACCGCATTG GTGATGGTCAACAAGTTACTATCAAGCAAATTAATGATTATGCTAAAAAAGACAAGAAGAATAATGTAGCTACATGGTAC AAGGAGTGGCAGTCCGAGGTTGATACCAATTTAGCCCGCTTTAAAGATACGTATAATATTAGTTATCGTCATGGACTGCT TGGGCTAGCAATTGCTACTCCAATCCTTGCTTTCATAGTAGGAATTATCGGAAGATTTGGGGAAGCAACTAACTTGTACT GGATAGGCGGAATAGTCTTAACGTTGATAATTGAAGCTTGGGTTTTAGCTACTTGGGATAAGGTTTCAATGTATAACGAG GCTGGATTGCAGCAATATAATCAAATCCGAGGATTTAAACAGATGATGAAAGATATTGCTCATTTTAATACGGCTGAGAT TGGTGACCTAATTCTTTGGGAACAAATTTTGCCATATGCCACCGCTTTTGGGTTGGCAGAAAAGGTTGCTAAAAAACTAA AGACGGATTTTGGAACTCAATTAAATGAAAATGTTCCATTTTATGCCTACTATTATGGAATCAATGGAATGCATGTAGGT ATTGCTAACAGTATTAGTACTTCTATTTCACACTCAGTATCAGCTAGTTCCAGTGGTTCGTCCGGCGGATTTAGTGGAGG TAGTTCTGGTGGTTTTGGAGGAGGTTCCGGTGGTGGAGCTTTTTAA
Upstream 100 bases:
>100_bases AACTCTGAAACAGATTCTACCATCGTCCGCACCTGCTCACGTATGCTATACTTTGACTAACATTTAACGGGGATTATTGA ACAATTTTTGGGGGAGTAAT
Downstream 100 bases:
>100_bases ACTTTAATTCGTTAAATTTGACACTGCTGAAGTAATAGCGTAAGGTTGAAGATGTTGCTTCGGGTACAGGAGCAAAGGGT ATTATTAATTATGTTTTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 601; Mature: 601
Protein sequence:
>601_residues MKFFTKRTFLLLVTMLTFGIFWNVKTVKADYEISQFRMQINVNKDGSANINQSVLYDFDDDYHGVYLTQDLRGTAGAELE GITVSNNKGTQNQVPINNSGENLTAKVESSKKQMKIRVYNAVSSDDQTKITYHYRINGVVTNYKDTAEINWKVIGSGWDV PLEDAQVTIKLPGKNVKGLHAWSHGEAAGYTTVDKAKGKVTLDIGDNPENTFVEAHMVFPTALTPDNKKIVNQNHLAAVK KQEYQLVKRENEAQARAQRIAAYAKITSAIISVLILIGMMGWLKKHGYHQYDIPTPMEHSFDVPSISPAEAEALFNKSKA DTKGVSAEMLVLAAEGKLKFKQIPYGKRGKETTEIERQGKFNMSFVDRCLDRIGDGQQVTIKQINDYAKKDKKNNVATWY KEWQSEVDTNLARFKDTYNISYRHGLLGLAIATPILAFIVGIIGRFGEATNLYWIGGIVLTLIIEAWVLATWDKVSMYNE AGLQQYNQIRGFKQMMKDIAHFNTAEIGDLILWEQILPYATAFGLAEKVAKKLKTDFGTQLNENVPFYAYYYGINGMHVG IANSISTSISHSVSASSSGSSGGFSGGSSGGFGGGSGGGAF
Sequences:
>Translated_601_residues MKFFTKRTFLLLVTMLTFGIFWNVKTVKADYEISQFRMQINVNKDGSANINQSVLYDFDDDYHGVYLTQDLRGTAGAELE GITVSNNKGTQNQVPINNSGENLTAKVESSKKQMKIRVYNAVSSDDQTKITYHYRINGVVTNYKDTAEINWKVIGSGWDV PLEDAQVTIKLPGKNVKGLHAWSHGEAAGYTTVDKAKGKVTLDIGDNPENTFVEAHMVFPTALTPDNKKIVNQNHLAAVK KQEYQLVKRENEAQARAQRIAAYAKITSAIISVLILIGMMGWLKKHGYHQYDIPTPMEHSFDVPSISPAEAEALFNKSKA DTKGVSAEMLVLAAEGKLKFKQIPYGKRGKETTEIERQGKFNMSFVDRCLDRIGDGQQVTIKQINDYAKKDKKNNVATWY KEWQSEVDTNLARFKDTYNISYRHGLLGLAIATPILAFIVGIIGRFGEATNLYWIGGIVLTLIIEAWVLATWDKVSMYNE AGLQQYNQIRGFKQMMKDIAHFNTAEIGDLILWEQILPYATAFGLAEKVAKKLKTDFGTQLNENVPFYAYYYGINGMHVG IANSISTSISHSVSASSSGSSGGFSGGSSGGFGGGSGGGAF >Mature_601_residues MKFFTKRTFLLLVTMLTFGIFWNVKTVKADYEISQFRMQINVNKDGSANINQSVLYDFDDDYHGVYLTQDLRGTAGAELE GITVSNNKGTQNQVPINNSGENLTAKVESSKKQMKIRVYNAVSSDDQTKITYHYRINGVVTNYKDTAEINWKVIGSGWDV PLEDAQVTIKLPGKNVKGLHAWSHGEAAGYTTVDKAKGKVTLDIGDNPENTFVEAHMVFPTALTPDNKKIVNQNHLAAVK KQEYQLVKRENEAQARAQRIAAYAKITSAIISVLILIGMMGWLKKHGYHQYDIPTPMEHSFDVPSISPAEAEALFNKSKA DTKGVSAEMLVLAAEGKLKFKQIPYGKRGKETTEIERQGKFNMSFVDRCLDRIGDGQQVTIKQINDYAKKDKKNNVATWY KEWQSEVDTNLARFKDTYNISYRHGLLGLAIATPILAFIVGIIGRFGEATNLYWIGGIVLTLIIEAWVLATWDKVSMYNE AGLQQYNQIRGFKQMMKDIAHFNTAEIGDLILWEQILPYATAFGLAEKVAKKLKTDFGTQLNENVPFYAYYYGINGMHVG IANSISTSISHSVSASSSGSSGGFSGGSSGGFGGGSGGGAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66540; Mature: 66540
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFFTKRTFLLLVTMLTFGIFWNVKTVKADYEISQFRMQINVNKDGSANINQSVLYDFDD CCCCHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEEEEEEECCCCCCCCCCCEEEECCC DYHGVYLTQDLRGTAGAELEGITVSNNKGTQNQVPINNSGENLTAKVESSKKQMKIRVYN CCCCEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEE AVSSDDQTKITYHYRINGVVTNYKDTAEINWKVIGSGWDVPLEDAQVTIKLPGKNVKGLH ECCCCCCEEEEEEEEEEEEEECCCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCCEE AWSHGEAAGYTTVDKAKGKVTLDIGDNPENTFVEAHMVFPTALTPDNKKIVNQNHLAAVK CCCCCCCCCCCEEECCCCEEEEEECCCCCCCEEEEEEEEEEEECCCCCHHCCCHHHHHHH KQEYQLVKRENEAQARAQRIAAYAKITSAIISVLILIGMMGWLKKHGYHQYDIPTPMEHS HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC FDVPSISPAEAEALFNKSKADTKGVSAEMLVLAAEGKLKFKQIPYGKRGKETTEIERQGK CCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEEECCCEEEEECCCCCCCCCCHHHHHCCC FNMSFVDRCLDRIGDGQQVTIKQINDYAKKDKKNNVATWYKEWQSEVDTNLARFKDTYNI CCHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEE SYRHGLLGLAIATPILAFIVGIIGRFGEATNLYWIGGIVLTLIIEAWVLATWDKVSMYNE EHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHCCHHHHHHHH AGLQQYNQIRGFKQMMKDIAHFNTAEIGDLILWEQILPYATAFGLAEKVAKKLKTDFGTQ HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LNENVPFYAYYYGINGMHVGIANSISTSISHSVSASSSGSSGGFSGGSSGGFGGGSGGGA CCCCCCEEEEEECCCCEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC F C >Mature Secondary Structure MKFFTKRTFLLLVTMLTFGIFWNVKTVKADYEISQFRMQINVNKDGSANINQSVLYDFDD CCCCHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEEEEEEECCCCCCCCCCCEEEECCC DYHGVYLTQDLRGTAGAELEGITVSNNKGTQNQVPINNSGENLTAKVESSKKQMKIRVYN CCCCEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEE AVSSDDQTKITYHYRINGVVTNYKDTAEINWKVIGSGWDVPLEDAQVTIKLPGKNVKGLH ECCCCCCEEEEEEEEEEEEEECCCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCCEE AWSHGEAAGYTTVDKAKGKVTLDIGDNPENTFVEAHMVFPTALTPDNKKIVNQNHLAAVK CCCCCCCCCCCEEECCCCEEEEEECCCCCCCEEEEEEEEEEEECCCCCHHCCCHHHHHHH KQEYQLVKRENEAQARAQRIAAYAKITSAIISVLILIGMMGWLKKHGYHQYDIPTPMEHS HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC FDVPSISPAEAEALFNKSKADTKGVSAEMLVLAAEGKLKFKQIPYGKRGKETTEIERQGK CCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEEECCCEEEEECCCCCCCCCCHHHHHCCC FNMSFVDRCLDRIGDGQQVTIKQINDYAKKDKKNNVATWYKEWQSEVDTNLARFKDTYNI CCHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEE SYRHGLLGLAIATPILAFIVGIIGRFGEATNLYWIGGIVLTLIIEAWVLATWDKVSMYNE EHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHCCHHHHHHHH AGLQQYNQIRGFKQMMKDIAHFNTAEIGDLILWEQILPYATAFGLAEKVAKKLKTDFGTQ HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LNENVPFYAYYYGINGMHVGIANSISTSISHSVSASSSGSSGGFSGGSSGGFGGGSGGGA CCCCCCEEEEEECCCCEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC F C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA