Click here to switch to the map view.

The map label for this gene is 116493511

Identifier: 116493511

GI number: 116493511

Start: 1759707

End: 1760570

Strand: Reverse

Name: 116493511

Synonym: PEPE_1783

Alternate gene names: NA

Gene position: 1760570-1759707 (Counterclockwise)

Preceding gene: 116493513

Following gene: 116493510

Centisome position: 96.08

GC content: 38.43

Gene sequence:

>864_bases
ATGCTTAAACAAAAAATAGCGGTGCTGGTCGATTCGTGTTCCGATGTACCAGCTGAAATTGCCAATCGGGAATATTTTGA
AATGATTCCGATGGGAGTCTTCTTTGGGGAAGAAGAGTACCAAGATCGTGTAAATATTGAGCCAGATGAATTTTATCAAA
AGTTGGCTAAGGCCAATCCTTTGCCAACTACGGCCAGTCCTAAGGGTGAATTAATCACAAAAGCACTAGACAATTTGTCA
AAACGAGGCTTTACGCAAATTATTGCTGTCTGCATTTCCTCGGGATTATCTGGAACAGCACAGCAAGTTAAAATATATGC
TAAAAATTACCCCCAACTTCAAATTGAGGTAATTGATACTAAAAATATTGGAATTGCTAGTGGGTTTGCTGCAGTAAGAG
CAAGTGAAGTGATTGAAGAAGGCTGGGAGTTCGATCAGATCGTTGAGGAAGTTCAGCGGGTAGCTAATCAAACGAAGGTA
TTTTTCTATGTTCCAACTTTAAAATACTTAATTGCGGGTGGGCGAATTGGACGTGTCGCCGGCTTGGTGGGTTCCATTAT
TAATTTGAAGCCGATTATTTCATGTGATGATGAGGGAATTTATTATCCAGTGGCGAAGGCACATGGGGAGAAAAAAGCCC
TTAAAAAAATGCTACAATTAGTTGATGATACCCTTGAAAATGCTCAAAAGTTTAATTTAGCTGTGGTACACGGTCTCAAT
GAGGGGTTAATGAATCAAATTAGTACTGAGTTTAAAAATAAATACCCTAATATGGGAAAATTTTATAATGGAGATATTTC
ACCTGCATTGGGAGTACATACCGGTCCAGGATTAATTGGCATTGGTGTACAAATTATTAAATAA

Upstream 100 bases:

>100_bases
TACTAGGAAAAATTTATTAAATAGCTAAGTTAGTCATCGGAATTGTTATACTAGTTTTATGAACTAGATAGATAGTTTTT
AAAACAAAGGGGAAGTTAGC

Downstream 100 bases:

>100_bases
GGTAATTGAAGGAGATCAAATGGATTCAAAACAATTAGAAAATTTTGCCAAAATGAGCTTGCCCAAATGGGATGAATTAC
CAAATATTGAACTTCATTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MLKQKIAVLVDSCSDVPAEIANREYFEMIPMGVFFGEEEYQDRVNIEPDEFYQKLAKANPLPTTASPKGELITKALDNLS
KRGFTQIIAVCISSGLSGTAQQVKIYAKNYPQLQIEVIDTKNIGIASGFAAVRASEVIEEGWEFDQIVEEVQRVANQTKV
FFYVPTLKYLIAGGRIGRVAGLVGSIINLKPIISCDDEGIYYPVAKAHGEKKALKKMLQLVDDTLENAQKFNLAVVHGLN
EGLMNQISTEFKNKYPNMGKFYNGDISPALGVHTGPGLIGIGVQIIK

Sequences:

>Translated_287_residues
MLKQKIAVLVDSCSDVPAEIANREYFEMIPMGVFFGEEEYQDRVNIEPDEFYQKLAKANPLPTTASPKGELITKALDNLS
KRGFTQIIAVCISSGLSGTAQQVKIYAKNYPQLQIEVIDTKNIGIASGFAAVRASEVIEEGWEFDQIVEEVQRVANQTKV
FFYVPTLKYLIAGGRIGRVAGLVGSIINLKPIISCDDEGIYYPVAKAHGEKKALKKMLQLVDDTLENAQKFNLAVVHGLN
EGLMNQISTEFKNKYPNMGKFYNGDISPALGVHTGPGLIGIGVQIIK
>Mature_287_residues
MLKQKIAVLVDSCSDVPAEIANREYFEMIPMGVFFGEEEYQDRVNIEPDEFYQKLAKANPLPTTASPKGELITKALDNLS
KRGFTQIIAVCISSGLSGTAQQVKIYAKNYPQLQIEVIDTKNIGIASGFAAVRASEVIEEGWEFDQIVEEVQRVANQTKV
FFYVPTLKYLIAGGRIGRVAGLVGSIINLKPIISCDDEGIYYPVAKAHGEKKALKKMLQLVDDTLENAQKFNLAVVHGLN
EGLMNQISTEFKNKYPNMGKFYNGDISPALGVHTGPGLIGIGVQIIK

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003797 [H]

Pfam domain/function: PF02645 DegV [H]

EC number: NA

Molecular weight: Translated: 31547; Mature: 31547

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKQKIAVLVDSCSDVPAEIANREYFEMIPMGVFFGEEEYQDRVNIEPDEFYQKLAKANP
CCHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHEECCHHHHCCCCCCHHHHHHHHHCCCC
LPTTASPKGELITKALDNLSKRGFTQIIAVCISSGLSGTAQQVKIYAKNYPQLQIEVIDT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEECCCCEEEEEEEEC
KNIGIASGFAAVRASEVIEEGWEFDQIVEEVQRVANQTKVFFYVPTLKYLIAGGRIGRVA
CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEEHHHHHHHCCCCHHHHH
GLVGSIINLKPIISCDDEGIYYPVAKAHGEKKALKKMLQLVDDTLENAQKFNLAVVHGLN
HHHHHHHCCCCEEEECCCCEEECHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCC
EGLMNQISTEFKNKYPNMGKFYNGDISPALGVHTGPGLIGIGVQIIK
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCEEEEC
>Mature Secondary Structure
MLKQKIAVLVDSCSDVPAEIANREYFEMIPMGVFFGEEEYQDRVNIEPDEFYQKLAKANP
CCHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHEECCHHHHCCCCCCHHHHHHHHHCCCC
LPTTASPKGELITKALDNLSKRGFTQIIAVCISSGLSGTAQQVKIYAKNYPQLQIEVIDT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEECCCCEEEEEEEEC
KNIGIASGFAAVRASEVIEEGWEFDQIVEEVQRVANQTKVFFYVPTLKYLIAGGRIGRVA
CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEEHHHHHHHCCCCHHHHH
GLVGSIINLKPIISCDDEGIYYPVAKAHGEKKALKKMLQLVDDTLENAQKFNLAVVHGLN
HHHHHHHCCCCEEEECCCCEEECHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCC
EGLMNQISTEFKNKYPNMGKFYNGDISPALGVHTGPGLIGIGVQIIK
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11466286 [H]