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The map label for this gene is 116493514

Identifier: 116493514

GI number: 116493514

Start: 1763978

End: 1764598

Strand: Reverse

Name: 116493514

Synonym: PEPE_1786

Alternate gene names: NA

Gene position: 1764598-1763978 (Counterclockwise)

Preceding gene: 116493515

Following gene: 116493513

Centisome position: 96.3

GC content: 33.82

Gene sequence:

>621_bases
TTGTTTGGAATTATCACTAGTTGGATTATACCCGCTTTTACCGGGAAACATACTCAAAAGCACCCCATTATTTTCTCTCA
TTTATTAGAACGACTAACGGCCTTGATTATTATTATGTTCGGTGAAACCATCGTAGGTATTTCAAAATATTTCACGCAAA
ATACATTTTCAATTCAATCCATAATGATTTTTATAATTGTAGTTAGTCTATTTTTTACGTATATTGTGGAGTTTGATCAT
TTAATTGAAGAACAGCGTACCCATGAAACTGGAAATTTACTAATATATTTACATTACTTTATTTTGTTTGGCTTGAGTTT
AGTCACGGTGGCCTTGGATTTTACCCATGAATCTGAAGCTAATGCTATATTTTCGATTACGTGTCTGTATGTGGGGATAG
CGCTATTTTATATCGGAATTGTTATTGCAAGTTATTACAACAAAACTACGCTAAAGTTAGAAAATTATGTAGTCGTTGCT
TTCATTGTCGTTACATTGATGGGGTATTTTACATCAATGTGCTTTGCAACGTTTTCGATAATCGCTGGTGTGACAGCTTT
AACAACGTTAATTAATGCGGTAGTCATAACGTTATCGTTGGTACGGCGGTATGAAAGGTAG

Upstream 100 bases:

>100_bases
CCGAAACATTGCGATGGTTTTTATGAGAATTTTGTTTTTTAGAACGGCTTGTTTGTTAGCGGGGGGAGTGTTGGCTGGCA
GATGAGGGACGACGATTGCC

Downstream 100 bases:

>100_bases
CCGAGATATAAATATCGAAGGACTTAGAAAAGCATTTTTATCAACTCTGAAACAGATTCTACCATCGTCCGCACCTGCTC
ACGTATGCTATACTTTGACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MFGIITSWIIPAFTGKHTQKHPIIFSHLLERLTALIIIMFGETIVGISKYFTQNTFSIQSIMIFIIVVSLFFTYIVEFDH
LIEEQRTHETGNLLIYLHYFILFGLSLVTVALDFTHESEANAIFSITCLYVGIALFYIGIVIASYYNKTTLKLENYVVVA
FIVVTLMGYFTSMCFATFSIIAGVTALTTLINAVVITLSLVRRYER

Sequences:

>Translated_206_residues
MFGIITSWIIPAFTGKHTQKHPIIFSHLLERLTALIIIMFGETIVGISKYFTQNTFSIQSIMIFIIVVSLFFTYIVEFDH
LIEEQRTHETGNLLIYLHYFILFGLSLVTVALDFTHESEANAIFSITCLYVGIALFYIGIVIASYYNKTTLKLENYVVVA
FIVVTLMGYFTSMCFATFSIIAGVTALTTLINAVVITLSLVRRYER
>Mature_206_residues
MFGIITSWIIPAFTGKHTQKHPIIFSHLLERLTALIIIMFGETIVGISKYFTQNTFSIQSIMIFIIVVSLFFTYIVEFDH
LIEEQRTHETGNLLIYLHYFILFGLSLVTVALDFTHESEANAIFSITCLYVGIALFYIGIVIASYYNKTTLKLENYVVVA
FIVVTLMGYFTSMCFATFSIIAGVTALTTLINAVVITLSLVRRYER

Specific function: Unknown

COG id: COG4292

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23415; Mature: 23415

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGIITSWIIPAFTGKHTQKHPIIFSHLLERLTALIIIMFGETIVGISKYFTQNTFSIQS
CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
IMIFIIVVSLFFTYIVEFDHLIEEQRTHETGNLLIYLHYFILFGLSLVTVALDFTHESEA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
NAIFSITCLYVGIALFYIGIVIASYYNKTTLKLENYVVVAFIVVTLMGYFTSMCFATFSI
CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAGVTALTTLINAVVITLSLVRRYER
HHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFGIITSWIIPAFTGKHTQKHPIIFSHLLERLTALIIIMFGETIVGISKYFTQNTFSIQS
CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
IMIFIIVVSLFFTYIVEFDHLIEEQRTHETGNLLIYLHYFILFGLSLVTVALDFTHESEA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
NAIFSITCLYVGIALFYIGIVIASYYNKTTLKLENYVVVAFIVVTLMGYFTSMCFATFSI
CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAGVTALTTLINAVVITLSLVRRYER
HHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA