Click here to switch to the map view.

The map label for this gene is spo0J [H]

Identifier: 116493451

GI number: 116493451

Start: 1698938

End: 1699789

Strand: Reverse

Name: spo0J [H]

Synonym: PEPE_1723

Alternate gene names: 116493451

Gene position: 1699789-1698938 (Counterclockwise)

Preceding gene: 116493452

Following gene: 116493450

Centisome position: 92.76

GC content: 37.68

Gene sequence:

>852_bases
ATGGGTAAGAAAGTATTAAATGAACAATTGAACACACAAAATGACGCAACATATCAGATGATCGATATTACTAAGATTTA
TCCTAATCCATTTCAACCGCGGCATATCTTTGATAAAGATCGACTTGAAGAATTGGCTAAATCGATAAAAAAATCTGGTA
TCTATCAACCTTTGATTCTACGTCAACCAATTGCTGCATTAGAACGTTATGAAATTATTGCTGGCGAGCGACGCTACCGG
GCGAGTATGTTAGCCGGTTTAGAACAGATTCCAGCAATTATTCGGAACTTTTCTGATGAAGCCACTATGGAAGCAGCAAT
TATTGAAAATTTACAACGGGAGGATCTTAGTCCGCTAGAAGAAGCAGAAGCTTACCAAGCAATGATTAAAGAGTTAAATT
TAACTCAAGCGCAGGTTTCGGAACGATTAGGTAAGAGTCGGCCTTATATTGCTAATTATTTACGTTTATTAGGACTGCCA
ACGGGCGTTAAATTGATGCTCCAAGAAGGACGAATTTCAATGGGACAAGCACGAACGTTGTTGGCGATTAAGCAACCTCA
GGCTTTGGAGAAACTTGCCCAACGGACGGTTGAAGAGGGATTAACGGTTCGTCAATTAGAAGAAATCGTAACTAAATTTA
ATTTAGATAAAGATCGAGAAGCAGCTCAAAAACAAAAACGAAAGAACAAATCACCTTTTATCCGAGAACTTGAAAATCAA
TTGGGAGAACGCTTTGGGACGCGCGCACTGGTTGTAGCAAAATCAAAACAAAAAGGTAAAATTGAAATCAATTATGATTC
AATTCAAGAACTTGATCGGATTTTGGATGTCTTGAATATTTCTTTAGACTAA

Upstream 100 bases:

>100_bases
AGTAGTGGTAGAAAAGAAAAAGCAAACACCAAATAAGTATCCACGTAAACCTGGAACACCAGGTAAAGATCCAATTGGCA
AGAAATAGAAGGTTATCATG

Downstream 100 bases:

>100_bases
GGAGGATTTAGTAATGGAATATGAATTACATGATATTGTTCAGATGAAGAAAAGTCATCCGTGTGGCTCTAATACTTGGG
AAATCATCCGGGTAGGGATG

Product: chromosome segregation DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MGKKVLNEQLNTQNDATYQMIDITKIYPNPFQPRHIFDKDRLEELAKSIKKSGIYQPLILRQPIAALERYEIIAGERRYR
ASMLAGLEQIPAIIRNFSDEATMEAAIIENLQREDLSPLEEAEAYQAMIKELNLTQAQVSERLGKSRPYIANYLRLLGLP
TGVKLMLQEGRISMGQARTLLAIKQPQALEKLAQRTVEEGLTVRQLEEIVTKFNLDKDREAAQKQKRKNKSPFIRELENQ
LGERFGTRALVVAKSKQKGKIEINYDSIQELDRILDVLNISLD

Sequences:

>Translated_283_residues
MGKKVLNEQLNTQNDATYQMIDITKIYPNPFQPRHIFDKDRLEELAKSIKKSGIYQPLILRQPIAALERYEIIAGERRYR
ASMLAGLEQIPAIIRNFSDEATMEAAIIENLQREDLSPLEEAEAYQAMIKELNLTQAQVSERLGKSRPYIANYLRLLGLP
TGVKLMLQEGRISMGQARTLLAIKQPQALEKLAQRTVEEGLTVRQLEEIVTKFNLDKDREAAQKQKRKNKSPFIRELENQ
LGERFGTRALVVAKSKQKGKIEINYDSIQELDRILDVLNISLD
>Mature_282_residues
GKKVLNEQLNTQNDATYQMIDITKIYPNPFQPRHIFDKDRLEELAKSIKKSGIYQPLILRQPIAALERYEIIAGERRYRA
SMLAGLEQIPAIIRNFSDEATMEAAIIENLQREDLSPLEEAEAYQAMIKELNLTQAQVSERLGKSRPYIANYLRLLGLPT
GVKLMLQEGRISMGQARTLLAIKQPQALEKLAQRTVEEGLTVRQLEEIVTKFNLDKDREAAQKQKRKNKSPFIRELENQL
GERFGTRALVVAKSKQKGKIEINYDSIQELDRILDVLNISLD

Specific function: Required for the initiation of sporulation and for normal chromosome segregation. Antagonizes sporulation inhibition of soj. It probably interacts with a specific DNA site and other proteins involved in partitioning and cell division, and antagonizes soj

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741 [H]

Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 32448; Mature: 32317

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKKVLNEQLNTQNDATYQMIDITKIYPNPFQPRHIFDKDRLEELAKSIKKSGIYQPLIL
CCHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHH
RQPIAALERYEIIAGERRYRASMLAGLEQIPAIIRNFSDEATMEAAIIENLQREDLSPLE
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHH
EAEAYQAMIKELNLTQAQVSERLGKSRPYIANYLRLLGLPTGVKLMLQEGRISMGQARTL
HHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHH
LAIKQPQALEKLAQRTVEEGLTVRQLEEIVTKFNLDKDREAAQKQKRKNKSPFIRELENQ
HHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHH
LGERFGTRALVVAKSKQKGKIEINYDSIQELDRILDVLNISLD
HHHHHCCEEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GKKVLNEQLNTQNDATYQMIDITKIYPNPFQPRHIFDKDRLEELAKSIKKSGIYQPLIL
CHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHH
RQPIAALERYEIIAGERRYRASMLAGLEQIPAIIRNFSDEATMEAAIIENLQREDLSPLE
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHH
EAEAYQAMIKELNLTQAQVSERLGKSRPYIANYLRLLGLPTGVKLMLQEGRISMGQARTL
HHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHH
LAIKQPQALEKLAQRTVEEGLTVRQLEEIVTKFNLDKDREAAQKQKRKNKSPFIRELENQ
HHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHH
LGERFGTRALVVAKSKQKGKIEINYDSIQELDRILDVLNISLD
HHHHHCCEEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 1552862; 9384377; 1900505; 8071208 [H]