| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
Click here to switch to the map view.
The map label for this gene is yyzM [H]
Identifier: 116493450
GI number: 116493450
Start: 1698739
End: 1698924
Strand: Reverse
Name: yyzM [H]
Synonym: PEPE_1722
Alternate gene names: 116493450
Gene position: 1698924-1698739 (Counterclockwise)
Preceding gene: 116493451
Following gene: 116493449
Centisome position: 92.72
GC content: 40.86
Gene sequence:
>186_bases ATGGAATATGAATTACATGATATTGTTCAGATGAAGAAAAGTCATCCGTGTGGCTCTAATACTTGGGAAATCATCCGGGT AGGGATGGACATTAAGATTAAATGCGAGGGATGTGGCCACATCGTGATGTTGCCTCGTCGTGAATTTGAACGAAAATTGA AGAAGGTCGTTGAACACGCTGAATAA
Upstream 100 bases:
>100_bases AAACAAAAAGGTAAAATTGAAATCAATTATGATTCAATTCAAGAACTTGATCGGATTTTGGATGTCTTGAATATTTCTTT AGACTAAGGAGGATTTAGTA
Downstream 100 bases:
>100_bases GTTGTAAGAGGGATTATGATAAGCCAATTTTAAGTTGCAAATCGTAGTGCCTCTTTTTTACTAACTAAAATCAAAAAATA GAACTGTAATATACGAGATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 61; Mature: 61
Protein sequence:
>61_residues MEYELHDIVQMKKSHPCGSNTWEIIRVGMDIKIKCEGCGHIVMLPRREFERKLKKVVEHAE
Sequences:
>Translated_61_residues MEYELHDIVQMKKSHPCGSNTWEIIRVGMDIKIKCEGCGHIVMLPRREFERKLKKVVEHAE >Mature_61_residues MEYELHDIVQMKKSHPCGSNTWEIIRVGMDIKIKCEGCGHIVMLPRREFERKLKKVVEHAE
Specific function: Unknown
COG id: COG4481
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009296 [H]
Pfam domain/function: PF06107 DUF951 [H]
EC number: NA
Molecular weight: Translated: 7208; Mature: 7208
Theoretical pI: Translated: 8.09; Mature: 8.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 6.6 %Met (Translated Protein) 11.5 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 6.6 %Met (Mature Protein) 11.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYELHDIVQMKKSHPCGSNTWEIIRVGMDIKIKCEGCGHIVMLPRREFERKLKKVVEHA CCCCHHHHHHHHHCCCCCCCCEEEEEECCCEEEEECCCCEEEECCCHHHHHHHHHHHHCC E C >Mature Secondary Structure MEYELHDIVQMKKSHPCGSNTWEIIRVGMDIKIKCEGCGHIVMLPRREFERKLKKVVEHA CCCCHHHHHHHHHCCCCCCCCEEEEEECCCEEEEECCCCEEEECCCHHHHHHHHHHHHCC E C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]