Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is yyzM [H]

Identifier: 116493450

GI number: 116493450

Start: 1698739

End: 1698924

Strand: Reverse

Name: yyzM [H]

Synonym: PEPE_1722

Alternate gene names: 116493450

Gene position: 1698924-1698739 (Counterclockwise)

Preceding gene: 116493451

Following gene: 116493449

Centisome position: 92.72

GC content: 40.86

Gene sequence:

>186_bases
ATGGAATATGAATTACATGATATTGTTCAGATGAAGAAAAGTCATCCGTGTGGCTCTAATACTTGGGAAATCATCCGGGT
AGGGATGGACATTAAGATTAAATGCGAGGGATGTGGCCACATCGTGATGTTGCCTCGTCGTGAATTTGAACGAAAATTGA
AGAAGGTCGTTGAACACGCTGAATAA

Upstream 100 bases:

>100_bases
AAACAAAAAGGTAAAATTGAAATCAATTATGATTCAATTCAAGAACTTGATCGGATTTTGGATGTCTTGAATATTTCTTT
AGACTAAGGAGGATTTAGTA

Downstream 100 bases:

>100_bases
GTTGTAAGAGGGATTATGATAAGCCAATTTTAAGTTGCAAATCGTAGTGCCTCTTTTTTACTAACTAAAATCAAAAAATA
GAACTGTAATATACGAGATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 61; Mature: 61

Protein sequence:

>61_residues
MEYELHDIVQMKKSHPCGSNTWEIIRVGMDIKIKCEGCGHIVMLPRREFERKLKKVVEHAE

Sequences:

>Translated_61_residues
MEYELHDIVQMKKSHPCGSNTWEIIRVGMDIKIKCEGCGHIVMLPRREFERKLKKVVEHAE
>Mature_61_residues
MEYELHDIVQMKKSHPCGSNTWEIIRVGMDIKIKCEGCGHIVMLPRREFERKLKKVVEHAE

Specific function: Unknown

COG id: COG4481

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009296 [H]

Pfam domain/function: PF06107 DUF951 [H]

EC number: NA

Molecular weight: Translated: 7208; Mature: 7208

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
6.6 %Met     (Translated Protein)
11.5 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
6.6 %Met     (Mature Protein)
11.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYELHDIVQMKKSHPCGSNTWEIIRVGMDIKIKCEGCGHIVMLPRREFERKLKKVVEHA
CCCCHHHHHHHHHCCCCCCCCEEEEEECCCEEEEECCCCEEEECCCHHHHHHHHHHHHCC
E
C
>Mature Secondary Structure
MEYELHDIVQMKKSHPCGSNTWEIIRVGMDIKIKCEGCGHIVMLPRREFERKLKKVVEHA
CCCCHHHHHHHHHCCCCCCCCEEEEEECCCEEEEECCCCEEEECCCHHHHHHHHHHHHCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]