| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is rsmG
Identifier: 116493452
GI number: 116493452
Start: 1699802
End: 1700533
Strand: Reverse
Name: rsmG
Synonym: PEPE_1724
Alternate gene names: 116493452
Gene position: 1700533-1699802 (Counterclockwise)
Preceding gene: 116493454
Following gene: 116493451
Centisome position: 92.8
GC content: 39.48
Gene sequence:
>732_bases ATGACCCCAGAAGAATTTAAAAAGGCTTTAGAAGATAAGGGATATCAAATTAGTGACCATCAAATGGCCCAGTTTGCTAC CTACTACAAAATGTTAGTTGAAACCAATGAACATGTTAATTTAACGGCAATTACTGAAGAAAATGAAGTGTACCTCAAGC ATTTTTATGATTCAGTCACCCCCCTATTAGAGGCGCCTGAATATTTTAAATCAGGAGCTGAACTATGTGATGTAGGAGCA GGGGCGGGATTTCCTTCTTTACCGATGAAGATTCTTTTCCCATCACTAAAAGTCACGATTGTTGATTCATTGAATAAACG AATCACTTTTTTGAAAACGTTGGTGGACCAATTAGAATTAACCGATGTGACTTTGGTACATGACCGAGCAGAAACTTTTG GTGCTAAAAAGTCCGTTTATCGTGAAAAATTTGAAATTGTAACGGCTCGGGCCGTAGCACGTTTGAGTGTCTTGAGTGAG TTGTGTATCCCGTTGGTTAAACAAAACGGATTTTTTATTGCCTTAAAAGCGGCCAATACTGAACAAGAACTTTCAGATGG GAAAATGGCCATTGCCATTTTAGGCGGTAAGCTAATCGTGGACAAGGATTTTGCGCTACCTGCGACTGGTGACGAACGCC ATTTAGTAGTGGTAGAAAAGAAAAAGCAAACACCAAATAAGTATCCACGTAAACCTGGAACACCAGGTAAAGATCCAATT GGCAAGAAATAG
Upstream 100 bases:
>100_bases TTTAGACTACAAATGTGTTCACAATATTGCTAAATCTTTACTAATTAGTTAAAGTGGAAATAAGATATGAAACAATTAAT GTTTCACAAGGAGAACAGAC
Downstream 100 bases:
>100_bases AAGGTTATCATGATGGGTAAGAAAGTATTAAATGAACAATTGAACACACAAAATGACGCAACATATCAGATGATCGATAT TACTAAGATTTATCCTAATC
Product: cell division SAM-dependent methyltransferase
Products: NA
Alternate protein names: 16S rRNA 7-methylguanosine methyltransferase; 16S rRNA m7G methyltransferase
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MTPEEFKKALEDKGYQISDHQMAQFATYYKMLVETNEHVNLTAITEENEVYLKHFYDSVTPLLEAPEYFKSGAELCDVGA GAGFPSLPMKILFPSLKVTIVDSLNKRITFLKTLVDQLELTDVTLVHDRAETFGAKKSVYREKFEIVTARAVARLSVLSE LCIPLVKQNGFFIALKAANTEQELSDGKMAIAILGGKLIVDKDFALPATGDERHLVVVEKKKQTPNKYPRKPGTPGKDPI GKK
Sequences:
>Translated_243_residues MTPEEFKKALEDKGYQISDHQMAQFATYYKMLVETNEHVNLTAITEENEVYLKHFYDSVTPLLEAPEYFKSGAELCDVGA GAGFPSLPMKILFPSLKVTIVDSLNKRITFLKTLVDQLELTDVTLVHDRAETFGAKKSVYREKFEIVTARAVARLSVLSE LCIPLVKQNGFFIALKAANTEQELSDGKMAIAILGGKLIVDKDFALPATGDERHLVVVEKKKQTPNKYPRKPGTPGKDPI GKK >Mature_242_residues TPEEFKKALEDKGYQISDHQMAQFATYYKMLVETNEHVNLTAITEENEVYLKHFYDSVTPLLEAPEYFKSGAELCDVGAG AGFPSLPMKILFPSLKVTIVDSLNKRITFLKTLVDQLELTDVTLVHDRAETFGAKKSVYREKFEIVTARAVARLSVLSEL CIPLVKQNGFFIALKAANTEQELSDGKMAIAILGGKLIVDKDFALPATGDERHLVVVEKKKQTPNKYPRKPGTPGKDPIG KK
Specific function: Specifically methylates the N7 position of a guanosine in 16S rRNA
COG id: COG0357
COG function: function code M; Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. RNA methyltransferase rsmG family
Homologues:
Organism=Escherichia coli, GI1790179, Length=215, Percent_Identity=33.953488372093, Blast_Score=115, Evalue=3e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): RSMG_PEDPA (Q03DH7)
Other databases:
- EMBL: CP000422 - RefSeq: YP_805187.1 - ProteinModelPortal: Q03DH7 - SMR: Q03DH7 - STRING: Q03DH7 - GeneID: 4417402 - GenomeReviews: CP000422_GR - KEGG: ppe:PEPE_1724 - NMPDR: fig|278197.10.peg.1525 - eggNOG: COG0357 - HOGENOM: HBG686577 - OMA: YELLVEW - PhylomeDB: Q03DH7 - BioCyc: PPEN278197:PEPE_1724-MONOMER - GO: GO:0005737 - HAMAP: MF_00074 - InterPro: IPR003682 - PIRSF: PIRSF003078 - TIGRFAMs: TIGR00138
Pfam domain/function: PF02527 GidB
EC number: 2.1.-.-
Molecular weight: Translated: 27094; Mature: 26962
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPEEFKKALEDKGYQISDHQMAQFATYYKMLVETNEHVNLTAITEENEVYLKHFYDSVT CCHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHH PLLEAPEYFKSGAELCDVGAGAGFPSLPMKILFPSLKVTIVDSLNKRITFLKTLVDQLEL HHHCCCHHHHCCHHHHHCCCCCCCCCCCHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHH TDVTLVHDRAETFGAKKSVYREKFEIVTARAVARLSVLSELCIPLVKQNGFFIALKAANT HHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCC EQELSDGKMAIAILGGKLIVDKDFALPATGDERHLVVVEKKKQTPNKYPRKPGTPGKDPI HHHHCCCCEEEEEECCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC GKK CCC >Mature Secondary Structure TPEEFKKALEDKGYQISDHQMAQFATYYKMLVETNEHVNLTAITEENEVYLKHFYDSVT CHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHH PLLEAPEYFKSGAELCDVGAGAGFPSLPMKILFPSLKVTIVDSLNKRITFLKTLVDQLEL HHHCCCHHHHCCHHHHHCCCCCCCCCCCHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHH TDVTLVHDRAETFGAKKSVYREKFEIVTARAVARLSVLSELCIPLVKQNGFFIALKAANT HHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCC EQELSDGKMAIAILGGKLIVDKDFALPATGDERHLVVVEKKKQTPNKYPRKPGTPGKDPI HHHHCCCCEEEEEECCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC GKK CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA