| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116493448
Identifier: 116493448
GI number: 116493448
Start: 1696683
End: 1697387
Strand: Reverse
Name: 116493448
Synonym: PEPE_1720
Alternate gene names: NA
Gene position: 1697387-1696683 (Counterclockwise)
Preceding gene: 116493449
Following gene: 116493447
Centisome position: 92.63
GC content: 39.01
Gene sequence:
>705_bases ATGACTGAAGAACCACGTAATGAGGGCAAGCAAAGTAGTTCAGTTGCCCACCATGAAAATGAACCTAAAAAACAAGAATT AACTAAACGTAATGCAGATTTTATGTATCGTTTACGAAAAGAGCTTAAAGAAAGCAAGCTTAACGATGAACAACGTAGCG AAGCTTTGATTGATACTGAAACTCGGTTATTAGAAGCCCAAAAAACTGGTAAAACAGCTAAACAATTATTTGGTACCCCA ACCCAACGATTAAATGAAATTGTAGAAGGGCCTAAGAAAGTTAAAATTGAAGCTCAAAATAACAATATGTGGATTAGAGC TTTAGATAATGGTTTAATTTTTGCCGCTCTGTTTGCTGCAATGTACGCAATCATGATGTTAATTGAACCCAAGACGATTA CTAGCACACCAGGTCCTTCAGGATTGCTAGCAATTATTTTAACGTCAGCAGTCGGTGGGATTGGTATGGGTTATATCTAC AAAGTCTTAGGATCTAGTAAAAAGCGCCCTTCCGTATGGAAACAAGCGGGAATCGTCGTAATTGCCGTAGTCCTTTGGAT TATCTTCTATACTAGCTTTGGAATGCTACCACCTGTTATCAATCCGACCCTTCCATTCTACGGATATGCAATATTAGCGG TTGCAGCATTCGGCGGACGGTGGTATCTTAGACGAAAGTTTCATATCGTTGGTGGCATATTTTAG
Upstream 100 bases:
>100_bases CGTTTACGTCTTGAAGGTAAGGAATACCTTGTGCAAGATGGCGATATTATCGAATTCCGCTTTAATGTCTAATATAAATC AAACGAGGAGTAAATAGATT
Downstream 100 bases:
>100_bases TTAAAGAAAAGGGAGAGAATGATGAGCAATTGGGATAACAAGTTTACAAAACAAGGTTTAACTTTTGATGATGTTTTATT AATTCCAGGCGAAAGCCATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MTEEPRNEGKQSSSVAHHENEPKKQELTKRNADFMYRLRKELKESKLNDEQRSEALIDTETRLLEAQKTGKTAKQLFGTP TQRLNEIVEGPKKVKIEAQNNNMWIRALDNGLIFAALFAAMYAIMMLIEPKTITSTPGPSGLLAIILTSAVGGIGMGYIY KVLGSSKKRPSVWKQAGIVVIAVVLWIIFYTSFGMLPPVINPTLPFYGYAILAVAAFGGRWYLRRKFHIVGGIF
Sequences:
>Translated_234_residues MTEEPRNEGKQSSSVAHHENEPKKQELTKRNADFMYRLRKELKESKLNDEQRSEALIDTETRLLEAQKTGKTAKQLFGTP TQRLNEIVEGPKKVKIEAQNNNMWIRALDNGLIFAALFAAMYAIMMLIEPKTITSTPGPSGLLAIILTSAVGGIGMGYIY KVLGSSKKRPSVWKQAGIVVIAVVLWIIFYTSFGMLPPVINPTLPFYGYAILAVAAFGGRWYLRRKFHIVGGIF >Mature_233_residues TEEPRNEGKQSSSVAHHENEPKKQELTKRNADFMYRLRKELKESKLNDEQRSEALIDTETRLLEAQKTGKTAKQLFGTPT QRLNEIVEGPKKVKIEAQNNNMWIRALDNGLIFAALFAAMYAIMMLIEPKTITSTPGPSGLLAIILTSAVGGIGMGYIYK VLGSSKKRPSVWKQAGIVVIAVVLWIIFYTSFGMLPPVINPTLPFYGYAILAVAAFGGRWYLRRKFHIVGGIF
Specific function: Unknown
COG id: COG4858
COG function: function code S; Uncharacterized membrane-bound protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26176; Mature: 26045
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEEPRNEGKQSSSVAHHENEPKKQELTKRNADFMYRLRKELKESKLNDEQRSEALIDTE CCCCCCCCCCHHCCHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH TRLLEAQKTGKTAKQLFGTPTQRLNEIVEGPKKVKIEAQNNNMWIRALDNGLIFAALFAA HHHHHHHHCCHHHHHHHCCHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCHHHHHHHHH MYAIMMLIEPKTITSTPGPSGLLAIILTSAVGGIGMGYIYKVLGSSKKRPSVWKQAGIVV HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHH IAVVLWIIFYTSFGMLPPVINPTLPFYGYAILAVAAFGGRWYLRRKFHIVGGIF HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCC >Mature Secondary Structure TEEPRNEGKQSSSVAHHENEPKKQELTKRNADFMYRLRKELKESKLNDEQRSEALIDTE CCCCCCCCCHHCCHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH TRLLEAQKTGKTAKQLFGTPTQRLNEIVEGPKKVKIEAQNNNMWIRALDNGLIFAALFAA HHHHHHHHCCHHHHHHHCCHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCHHHHHHHHH MYAIMMLIEPKTITSTPGPSGLLAIILTSAVGGIGMGYIYKVLGSSKKRPSVWKQAGIVV HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHH IAVVLWIIFYTSFGMLPPVINPTLPFYGYAILAVAAFGGRWYLRRKFHIVGGIF HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA