Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116493448

Identifier: 116493448

GI number: 116493448

Start: 1696683

End: 1697387

Strand: Reverse

Name: 116493448

Synonym: PEPE_1720

Alternate gene names: NA

Gene position: 1697387-1696683 (Counterclockwise)

Preceding gene: 116493449

Following gene: 116493447

Centisome position: 92.63

GC content: 39.01

Gene sequence:

>705_bases
ATGACTGAAGAACCACGTAATGAGGGCAAGCAAAGTAGTTCAGTTGCCCACCATGAAAATGAACCTAAAAAACAAGAATT
AACTAAACGTAATGCAGATTTTATGTATCGTTTACGAAAAGAGCTTAAAGAAAGCAAGCTTAACGATGAACAACGTAGCG
AAGCTTTGATTGATACTGAAACTCGGTTATTAGAAGCCCAAAAAACTGGTAAAACAGCTAAACAATTATTTGGTACCCCA
ACCCAACGATTAAATGAAATTGTAGAAGGGCCTAAGAAAGTTAAAATTGAAGCTCAAAATAACAATATGTGGATTAGAGC
TTTAGATAATGGTTTAATTTTTGCCGCTCTGTTTGCTGCAATGTACGCAATCATGATGTTAATTGAACCCAAGACGATTA
CTAGCACACCAGGTCCTTCAGGATTGCTAGCAATTATTTTAACGTCAGCAGTCGGTGGGATTGGTATGGGTTATATCTAC
AAAGTCTTAGGATCTAGTAAAAAGCGCCCTTCCGTATGGAAACAAGCGGGAATCGTCGTAATTGCCGTAGTCCTTTGGAT
TATCTTCTATACTAGCTTTGGAATGCTACCACCTGTTATCAATCCGACCCTTCCATTCTACGGATATGCAATATTAGCGG
TTGCAGCATTCGGCGGACGGTGGTATCTTAGACGAAAGTTTCATATCGTTGGTGGCATATTTTAG

Upstream 100 bases:

>100_bases
CGTTTACGTCTTGAAGGTAAGGAATACCTTGTGCAAGATGGCGATATTATCGAATTCCGCTTTAATGTCTAATATAAATC
AAACGAGGAGTAAATAGATT

Downstream 100 bases:

>100_bases
TTAAAGAAAAGGGAGAGAATGATGAGCAATTGGGATAACAAGTTTACAAAACAAGGTTTAACTTTTGATGATGTTTTATT
AATTCCAGGCGAAAGCCATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MTEEPRNEGKQSSSVAHHENEPKKQELTKRNADFMYRLRKELKESKLNDEQRSEALIDTETRLLEAQKTGKTAKQLFGTP
TQRLNEIVEGPKKVKIEAQNNNMWIRALDNGLIFAALFAAMYAIMMLIEPKTITSTPGPSGLLAIILTSAVGGIGMGYIY
KVLGSSKKRPSVWKQAGIVVIAVVLWIIFYTSFGMLPPVINPTLPFYGYAILAVAAFGGRWYLRRKFHIVGGIF

Sequences:

>Translated_234_residues
MTEEPRNEGKQSSSVAHHENEPKKQELTKRNADFMYRLRKELKESKLNDEQRSEALIDTETRLLEAQKTGKTAKQLFGTP
TQRLNEIVEGPKKVKIEAQNNNMWIRALDNGLIFAALFAAMYAIMMLIEPKTITSTPGPSGLLAIILTSAVGGIGMGYIY
KVLGSSKKRPSVWKQAGIVVIAVVLWIIFYTSFGMLPPVINPTLPFYGYAILAVAAFGGRWYLRRKFHIVGGIF
>Mature_233_residues
TEEPRNEGKQSSSVAHHENEPKKQELTKRNADFMYRLRKELKESKLNDEQRSEALIDTETRLLEAQKTGKTAKQLFGTPT
QRLNEIVEGPKKVKIEAQNNNMWIRALDNGLIFAALFAAMYAIMMLIEPKTITSTPGPSGLLAIILTSAVGGIGMGYIYK
VLGSSKKRPSVWKQAGIVVIAVVLWIIFYTSFGMLPPVINPTLPFYGYAILAVAAFGGRWYLRRKFHIVGGIF

Specific function: Unknown

COG id: COG4858

COG function: function code S; Uncharacterized membrane-bound protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26176; Mature: 26045

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEEPRNEGKQSSSVAHHENEPKKQELTKRNADFMYRLRKELKESKLNDEQRSEALIDTE
CCCCCCCCCCHHCCHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
TRLLEAQKTGKTAKQLFGTPTQRLNEIVEGPKKVKIEAQNNNMWIRALDNGLIFAALFAA
HHHHHHHHCCHHHHHHHCCHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCHHHHHHHHH
MYAIMMLIEPKTITSTPGPSGLLAIILTSAVGGIGMGYIYKVLGSSKKRPSVWKQAGIVV
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
IAVVLWIIFYTSFGMLPPVINPTLPFYGYAILAVAAFGGRWYLRRKFHIVGGIF
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TEEPRNEGKQSSSVAHHENEPKKQELTKRNADFMYRLRKELKESKLNDEQRSEALIDTE
CCCCCCCCCHHCCHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
TRLLEAQKTGKTAKQLFGTPTQRLNEIVEGPKKVKIEAQNNNMWIRALDNGLIFAALFAA
HHHHHHHHCCHHHHHHHCCHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCHHHHHHHHH
MYAIMMLIEPKTITSTPGPSGLLAIILTSAVGGIGMGYIYKVLGSSKKRPSVWKQAGIVV
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
IAVVLWIIFYTSFGMLPPVINPTLPFYGYAILAVAAFGGRWYLRRKFHIVGGIF
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA