Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116492736

Identifier: 116492736

GI number: 116492736

Start: 979053

End: 980387

Strand: Reverse

Name: 116492736

Synonym: PEPE_0973

Alternate gene names: NA

Gene position: 980387-979053 (Counterclockwise)

Preceding gene: 116492737

Following gene: 116492735

Centisome position: 53.5

GC content: 25.99

Gene sequence:

>1335_bases
ATGAAGGCTTATTTTAAAACGGTACATGATATTACGAAAATAGATATAGGGGAAATCGACATATATTTTAGTCTTGGAGA
TATAGTCGTAGAGTCAAAATATAATGAGAAACATGGAACAAAAGAAATTGAGATTAGAGGAATTTTAGATTTTAATCCTA
TATATTCAAATTTAGATTTAAGAAGATTAATTAGGCCCGAATTATTAATAATACAGGGAGTAATTTCACTTTTCATTGAT
TTTCCTATTACTGTTTATGACATTACAAGTCAAATTCAATCCTTTACTGATATTGAAAATTTTGTTGAAAATAAATTCAA
AAAATCTACTTTTAAAATTGAGAAAAAGGATTATTCGAATGAGCTGGAGTTAGTTTTAGAAAGAATAGAAGATCCTAAAA
ATAAAAATTTAGCGGTTTCAGTCCTTGATAGATGGCGAAAAGTTCTCGATTTTAGAAAGGAGGATATGTTTGAAAAACTT
TATCGTGATGAAGAATTACTTGGAATATTTCATATTTTAGATTTGCTTAGTGATATATATGTTGACGATAATACGAAGAT
TATTGTCCAGAGTTTAGGTGCGAATAGCCCAAATTTTAGTACTAAAATTAAATATCTACTTTCAAAAGAAGGAATAACCT
CGGAAGAGGAATTTGACTTTGTTGGAGTAGCAATAAAATGTAGAAATGCTATAGCACATGATAGAGTTGTATTTCAACCT
GTAGTCAACTGGCCTTTAGCTCCTTTTTTTAATATTTCAGAAAGTTTTATAGATGTAGATATATTACGTTGCTTAACAAA
AAAATTAATCGGAAATTTTTTTGGAATTAATATTTGGGATAATGAATATAATGAATTTGCGATAAAATATCTACGACCAT
CTGTTAAAAATATTTGTGAATTTATAAAAAAACCTAGTAAATATGAGATAATATCCATTGATGATATGGACATACTGAAT
GAGAAAAAACATGTAATAACTTGGGAAAGTGTTTACATAAGATATCTTCAAAATCCCAAAAAGATAAAGATAGACAAGCT
AGGTAGTGCTTTGAAATCGAGTTTTTTTAATTTAGAATTGAATAGTAAAAATGCGTATAATATTTTCAATATTTCTGTAA
TATTGATAGAGTCTAATGATTCTGAAATTGTCGATAGATGTAGAGAAAATATTGAATGTTTATTAGAAAAAGAATTAATA
GAAAATAATGATTTGTATGAAATAATACCTGAATTTGATCTTCACCACGTTAATTATATAAAATATAAAGAAATTGTTCT
TAATAAGGTTAGGAATAATAATACGTATTTTAATTTAAATGATAGTATGTACTAA

Upstream 100 bases:

>100_bases
GCTATCAAAGCATCTAATTAATATAGTAATTAGTTTGTTTTTTAGATTGATAAAACAACAATGTGGATTACGAGTTTGAT
TTAAGGAGAGTTCACTTATC

Downstream 100 bases:

>100_bases
ATTAGAAAAGACTACGAATAATTTTTTGAATGTTAACGGTTAATATGACAGCTAAGTCAATAAATATTGATGAAGACAAT
TGAAGAAAAACAATTCATTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MKAYFKTVHDITKIDIGEIDIYFSLGDIVVESKYNEKHGTKEIEIRGILDFNPIYSNLDLRRLIRPELLIIQGVISLFID
FPITVYDITSQIQSFTDIENFVENKFKKSTFKIEKKDYSNELELVLERIEDPKNKNLAVSVLDRWRKVLDFRKEDMFEKL
YRDEELLGIFHILDLLSDIYVDDNTKIIVQSLGANSPNFSTKIKYLLSKEGITSEEEFDFVGVAIKCRNAIAHDRVVFQP
VVNWPLAPFFNISESFIDVDILRCLTKKLIGNFFGINIWDNEYNEFAIKYLRPSVKNICEFIKKPSKYEIISIDDMDILN
EKKHVITWESVYIRYLQNPKKIKIDKLGSALKSSFFNLELNSKNAYNIFNISVILIESNDSEIVDRCRENIECLLEKELI
ENNDLYEIIPEFDLHHVNYIKYKEIVLNKVRNNNTYFNLNDSMY

Sequences:

>Translated_444_residues
MKAYFKTVHDITKIDIGEIDIYFSLGDIVVESKYNEKHGTKEIEIRGILDFNPIYSNLDLRRLIRPELLIIQGVISLFID
FPITVYDITSQIQSFTDIENFVENKFKKSTFKIEKKDYSNELELVLERIEDPKNKNLAVSVLDRWRKVLDFRKEDMFEKL
YRDEELLGIFHILDLLSDIYVDDNTKIIVQSLGANSPNFSTKIKYLLSKEGITSEEEFDFVGVAIKCRNAIAHDRVVFQP
VVNWPLAPFFNISESFIDVDILRCLTKKLIGNFFGINIWDNEYNEFAIKYLRPSVKNICEFIKKPSKYEIISIDDMDILN
EKKHVITWESVYIRYLQNPKKIKIDKLGSALKSSFFNLELNSKNAYNIFNISVILIESNDSEIVDRCRENIECLLEKELI
ENNDLYEIIPEFDLHHVNYIKYKEIVLNKVRNNNTYFNLNDSMY
>Mature_444_residues
MKAYFKTVHDITKIDIGEIDIYFSLGDIVVESKYNEKHGTKEIEIRGILDFNPIYSNLDLRRLIRPELLIIQGVISLFID
FPITVYDITSQIQSFTDIENFVENKFKKSTFKIEKKDYSNELELVLERIEDPKNKNLAVSVLDRWRKVLDFRKEDMFEKL
YRDEELLGIFHILDLLSDIYVDDNTKIIVQSLGANSPNFSTKIKYLLSKEGITSEEEFDFVGVAIKCRNAIAHDRVVFQP
VVNWPLAPFFNISESFIDVDILRCLTKKLIGNFFGINIWDNEYNEFAIKYLRPSVKNICEFIKKPSKYEIISIDDMDILN
EKKHVITWESVYIRYLQNPKKIKIDKLGSALKSSFFNLELNSKNAYNIFNISVILIESNDSEIVDRCRENIECLLEKELI
ENNDLYEIIPEFDLHHVNYIKYKEIVLNKVRNNNTYFNLNDSMY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52276; Mature: 52276

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAYFKTVHDITKIDIGEIDIYFSLGDIVVESKYNEKHGTKEIEIRGILDFNPIYSNLDL
CCCHHHHHHHHHCCCCCCEEEEEEECCEEEECCCCCCCCCEEEEEEEEEECCCCCCCCCH
RRLIRPELLIIQGVISLFIDFPITVYDITSQIQSFTDIENFVENKFKKSTFKIEKKDYSN
HHHHCHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHCCCH
ELELVLERIEDPKNKNLAVSVLDRWRKVLDFRKEDMFEKLYRDEELLGIFHILDLLSDIY
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHE
VDDNTKIIVQSLGANSPNFSTKIKYLLSKEGITSEEEFDFVGVAIKCRNAIAHDRVVFQP
ECCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEEHHHHHCCCEEEEH
VVNWPLAPFFNISESFIDVDILRCLTKKLIGNFFGINIWDNEYNEFAIKYLRPSVKNICE
HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHCHHHHHHHH
FIKKPSKYEIISIDDMDILNEKKHVITWESVYIRYLQNPKKIKIDKLGSALKSSFFNLEL
HHCCCCCEEEEEECCCHHHCCCCEEEEHHHHHHHHHCCCCEEEHHHHHHHHHHCEEEEEE
NSKNAYNIFNISVILIESNDSEIVDRCRENIECLLEKELIENNDLYEIIPEFDLHHVNYI
CCCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHH
KYKEIVLNKVRNNNTYFNLNDSMY
HHHHHHHHHHCCCCCEEEECCCCC
>Mature Secondary Structure
MKAYFKTVHDITKIDIGEIDIYFSLGDIVVESKYNEKHGTKEIEIRGILDFNPIYSNLDL
CCCHHHHHHHHHCCCCCCEEEEEEECCEEEECCCCCCCCCEEEEEEEEEECCCCCCCCCH
RRLIRPELLIIQGVISLFIDFPITVYDITSQIQSFTDIENFVENKFKKSTFKIEKKDYSN
HHHHCHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHCCCH
ELELVLERIEDPKNKNLAVSVLDRWRKVLDFRKEDMFEKLYRDEELLGIFHILDLLSDIY
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHE
VDDNTKIIVQSLGANSPNFSTKIKYLLSKEGITSEEEFDFVGVAIKCRNAIAHDRVVFQP
ECCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEEHHHHHCCCEEEEH
VVNWPLAPFFNISESFIDVDILRCLTKKLIGNFFGINIWDNEYNEFAIKYLRPSVKNICE
HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHCHHHHHHHH
FIKKPSKYEIISIDDMDILNEKKHVITWESVYIRYLQNPKKIKIDKLGSALKSSFFNLEL
HHCCCCCEEEEEECCCHHHCCCCEEEEHHHHHHHHHCCCCEEEHHHHHHHHHHCEEEEEE
NSKNAYNIFNISVILIESNDSEIVDRCRENIECLLEKELIENNDLYEIIPEFDLHHVNYI
CCCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHH
KYKEIVLNKVRNNNTYFNLNDSMY
HHHHHHHHHHCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA