Click here to switch to the map view.

The map label for this gene is 116492737

Identifier: 116492737

GI number: 116492737

Start: 980589

End: 982619

Strand: Reverse

Name: 116492737

Synonym: PEPE_0974

Alternate gene names: NA

Gene position: 982619-980589 (Counterclockwise)

Preceding gene: 116492738

Following gene: 116492736

Centisome position: 53.63

GC content: 24.37

Gene sequence:

>2031_bases
ATGGAACGATTTAAGTTTTACAGTATCAATGATGCATCTATAGATTTTTACTGGGGTAGAATAAAAAAAGTAATGAAAAA
TGTTGAATCAAACGACCATCCTATTTTTTTAGATGTATTAGAATTTTACAATATAAATAAAATTCTAAAAAACGATATAT
ACTTAAGTGAATTTTCAAAAGAGCAAATCAAGAAAATAAGAGGTTCTTTTAATAAAAAAATAAATATATTTTTTTCATCT
TTAACTAAAGAAAATATTATCTATTACTTAGAATGTTTATTTTCAGTAACTTCAAATACAAGTATAGAAAATTATCATAA
TCCGAAAGATGCTAAAAATACTGATATAGATAGTAATAGCACATTTTTTAGAGCTGATTTTTTAGAGTGCTTTGAAAAAT
TTCAATTAGATAAAAAAATTACCGAATCTGATTTAAAAAATATTATTAATAGATTTTCAATACCAATTTGGTACTTTTTA
AAATCGGATTATTTTTCAATTAGATATCCTAAGTTGATAAAGACGTTTTTTTTATCGAATACTGAAAATTTTGAGCTGTT
TCTAAGTAATTATATTGTGAATAATGATAATTATGTTATTCCTGATAATATTAGTACAGCTGAACTATACAATCTTTGTG
AATGGTATATAGATGAATCTTCAAATTTAAATTACCTTAGACTAATTAACCAAGGAATTAAAGATATTCAAAGGCTAGTC
ATTGATGCTAAATTAAAATTAAAAGCACAGAGGAAAATTGAACAATTAGAAAAAGTATTTTTAAATAGTCAGAGCAAGAA
AAATAGTAATGGTTTTTTACAGAGTGTAGCTATCTATACAGATCGAAAAAAATATCTAACTTCTGAAAAAAGTGAATTAA
AAATTTTAATTGATGTCGATGATATAAAAACACACTCTTCTTTTGAATCGTTGCTTAATTATTTAATGTATATGGATTAT
TTTTTTAATGAGAATTGGATTCTAAATTTGGGTAGTTTTCCAAATTTTGAGAGTTCAACTTTAACAAGGCTCTTTTACGG
ACCAAAGACGAGGAAAAATTACGAAACAAGTTTTTATTTTCACAATAAAGATTTATTGGTAAAGCAAGCATTTAAGGGCT
TTCAACATATTTTAGACGAAAATCTAGGGTTAAGGATTGAAGATTTAATTAATTATTTTTTTGAAAAGTACTGCGAAAAT
AACTTTGAGATAGAATGGTTACCAATTAGATTTGCTGGCGAAAAGGAAAAGATAAATATTCAAACAAAGAACTTATTTAC
CATTGAGGAACAAATAAGAAAACAGTGGAACCTATTAATTGATGAAGGAGAAATAGATAAGGATTTATTTGCACTTGAAT
CTACACCTAGGATATATGATTTGGGCAGTTTCTTGCATAAGAAATATATTTATTTAAATGAAGAAAATAAAGACATAAAA
AAAGTTTTAGAACTTCTGTTTTCTGATCAGTCCCATTTAAATACGGTAAAAGTTACTGATGGATATTTACATGAAAATAG
CTTCATACAGCTTTTGGAAAAGCATAATATTAATTATTCTTTTTTTGAGAACTATCAGCGACAAGATATAAATTATTTAA
TTGAAAATAATATCATTACCAAAAGAAAAGATGACGTTATTTATGTAAATAAAAAACAAATGAGAAGAATAAGAATTTTT
TCAATGATCTTCAATTATGGGGTTATCAATTACTATAACGGATTAACAAAAATATCTAGAAAAGTCGATTTAAAACAACA
ACAAAATGAAATAGATGAAATCTTGGAAGAAGGACTCTTGATCTATAAAGATACTTTATTTTCAAAACCAGAATCTGACT
ATTTAAATTATTTACTGAATGATTCAGAATTTGATAACGCATTAGGTATAAGAAATAAATATTTACATGGTTCAGTCTTT
GAAGATAATGTTGAAGATTTGTTATATGCGTTAATTATATTGACTATCTATGTCATTAAAATTAATGAAGAATTGATACT
TAATAAACATTATGATAACAAGGATAAATAA

Upstream 100 bases:

>100_bases
TAACATATATTAATCAATGACTAGGGTTAGATGGTTAAAAATTATTATTTGAAATATTATTTTTAATATTGGTTGGAATA
ATTGTATGCGAGGTAAGTCG

Downstream 100 bases:

>100_bases
GACTGTTTACTATCAAAAATATAGGGTTTCTTGTTTTGAATTACAAAAAGTGGATAAAATTTTAATAATCTTCAAGCTGG
TTAAATAACAGTTATTATTG

Product: hypothetical protein

Products: NA

Alternate protein names: DNA Repair ATPase

Number of amino acids: Translated: 676; Mature: 676

Protein sequence:

>676_residues
MERFKFYSINDASIDFYWGRIKKVMKNVESNDHPIFLDVLEFYNINKILKNDIYLSEFSKEQIKKIRGSFNKKINIFFSS
LTKENIIYYLECLFSVTSNTSIENYHNPKDAKNTDIDSNSTFFRADFLECFEKFQLDKKITESDLKNIINRFSIPIWYFL
KSDYFSIRYPKLIKTFFLSNTENFELFLSNYIVNNDNYVIPDNISTAELYNLCEWYIDESSNLNYLRLINQGIKDIQRLV
IDAKLKLKAQRKIEQLEKVFLNSQSKKNSNGFLQSVAIYTDRKKYLTSEKSELKILIDVDDIKTHSSFESLLNYLMYMDY
FFNENWILNLGSFPNFESSTLTRLFYGPKTRKNYETSFYFHNKDLLVKQAFKGFQHILDENLGLRIEDLINYFFEKYCEN
NFEIEWLPIRFAGEKEKINIQTKNLFTIEEQIRKQWNLLIDEGEIDKDLFALESTPRIYDLGSFLHKKYIYLNEENKDIK
KVLELLFSDQSHLNTVKVTDGYLHENSFIQLLEKHNINYSFFENYQRQDINYLIENNIITKRKDDVIYVNKKQMRRIRIF
SMIFNYGVINYYNGLTKISRKVDLKQQQNEIDEILEEGLLIYKDTLFSKPESDYLNYLLNDSEFDNALGIRNKYLHGSVF
EDNVEDLLYALIILTIYVIKINEELILNKHYDNKDK

Sequences:

>Translated_676_residues
MERFKFYSINDASIDFYWGRIKKVMKNVESNDHPIFLDVLEFYNINKILKNDIYLSEFSKEQIKKIRGSFNKKINIFFSS
LTKENIIYYLECLFSVTSNTSIENYHNPKDAKNTDIDSNSTFFRADFLECFEKFQLDKKITESDLKNIINRFSIPIWYFL
KSDYFSIRYPKLIKTFFLSNTENFELFLSNYIVNNDNYVIPDNISTAELYNLCEWYIDESSNLNYLRLINQGIKDIQRLV
IDAKLKLKAQRKIEQLEKVFLNSQSKKNSNGFLQSVAIYTDRKKYLTSEKSELKILIDVDDIKTHSSFESLLNYLMYMDY
FFNENWILNLGSFPNFESSTLTRLFYGPKTRKNYETSFYFHNKDLLVKQAFKGFQHILDENLGLRIEDLINYFFEKYCEN
NFEIEWLPIRFAGEKEKINIQTKNLFTIEEQIRKQWNLLIDEGEIDKDLFALESTPRIYDLGSFLHKKYIYLNEENKDIK
KVLELLFSDQSHLNTVKVTDGYLHENSFIQLLEKHNINYSFFENYQRQDINYLIENNIITKRKDDVIYVNKKQMRRIRIF
SMIFNYGVINYYNGLTKISRKVDLKQQQNEIDEILEEGLLIYKDTLFSKPESDYLNYLLNDSEFDNALGIRNKYLHGSVF
EDNVEDLLYALIILTIYVIKINEELILNKHYDNKDK
>Mature_676_residues
MERFKFYSINDASIDFYWGRIKKVMKNVESNDHPIFLDVLEFYNINKILKNDIYLSEFSKEQIKKIRGSFNKKINIFFSS
LTKENIIYYLECLFSVTSNTSIENYHNPKDAKNTDIDSNSTFFRADFLECFEKFQLDKKITESDLKNIINRFSIPIWYFL
KSDYFSIRYPKLIKTFFLSNTENFELFLSNYIVNNDNYVIPDNISTAELYNLCEWYIDESSNLNYLRLINQGIKDIQRLV
IDAKLKLKAQRKIEQLEKVFLNSQSKKNSNGFLQSVAIYTDRKKYLTSEKSELKILIDVDDIKTHSSFESLLNYLMYMDY
FFNENWILNLGSFPNFESSTLTRLFYGPKTRKNYETSFYFHNKDLLVKQAFKGFQHILDENLGLRIEDLINYFFEKYCEN
NFEIEWLPIRFAGEKEKINIQTKNLFTIEEQIRKQWNLLIDEGEIDKDLFALESTPRIYDLGSFLHKKYIYLNEENKDIK
KVLELLFSDQSHLNTVKVTDGYLHENSFIQLLEKHNINYSFFENYQRQDINYLIENNIITKRKDDVIYVNKKQMRRIRIF
SMIFNYGVINYYNGLTKISRKVDLKQQQNEIDEILEEGLLIYKDTLFSKPESDYLNYLLNDSEFDNALGIRNKYLHGSVF
EDNVEDLLYALIILTIYVIKINEELILNKHYDNKDK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 81002; Mature: 81002

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERFKFYSINDASIDFYWGRIKKVMKNVESNDHPIFLDVLEFYNINKILKNDIYLSEFSK
CCCEEEEECCCCCEEHHHHHHHHHHHHCCCCCCCEEEEHHHHHCHHHHHHCCCHHHHCCH
EQIKKIRGSFNKKINIFFSSLTKENIIYYLECLFSVTSNTSIENYHNPKDAKNTDIDSNS
HHHHHHHHCCCCEEEEEEEHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
TFFRADFLECFEKFQLDKKITESDLKNIINRFSIPIWYFLKSDYFSIRYPKLIKTFFLSN
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEECHHHHHHHHHCC
TENFELFLSNYIVNNDNYVIPDNISTAELYNLCEWYIDESSNLNYLRLINQGIKDIQRLV
CCCCEEEEEEEEECCCCEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
IDAKLKLKAQRKIEQLEKVFLNSQSKKNSNGFLQSVAIYTDRKKYLTSEKSELKILIDVD
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEEEEEECCHHHHCCCCCCEEEEEEEC
DIKTHSSFESLLNYLMYMDYFFNENWILNLGSFPNFESSTLTRLFYGPKTRKNYETSFYF
CCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHEEECCCCCCCCCEEEEE
HNKDLLVKQAFKGFQHILDENLGLRIEDLINYFFEKYCENNFEIEWLPIRFAGEKEKINI
ECCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEE
QTKNLFTIEEQIRKQWNLLIDEGEIDKDLFALESTPRIYDLGSFLHKKYIYLNEENKDIK
EECCEEEHHHHHHHHHCEEEECCCCCCHHHHHCCCCCHHHHHHHHHHEEEEECCCCHHHH
KVLELLFSDQSHLNTVKVTDGYLHENSFIQLLEKHNINYSFFENYQRQDINYLIENNIIT
HHHHHHHCCCCCCCEEEEECCEECCHHHHHHHHHCCCCHHHHHHHHHCCCCEEEECCEEE
KRKDDVIYVNKKQMRRIRIFSMIFNYGVINYYNGLTKISRKVDLKQQQNEIDEILEEGLL
ECCCCEEEECHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
IYKDTLFSKPESDYLNYLLNDSEFDNALGIRNKYLHGSVFEDNVEDLLYALIILTIYVIK
EEEHHHCCCCCHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEE
INEELILNKHYDNKDK
ECCCEEEECCCCCCCC
>Mature Secondary Structure
MERFKFYSINDASIDFYWGRIKKVMKNVESNDHPIFLDVLEFYNINKILKNDIYLSEFSK
CCCEEEEECCCCCEEHHHHHHHHHHHHCCCCCCCEEEEHHHHHCHHHHHHCCCHHHHCCH
EQIKKIRGSFNKKINIFFSSLTKENIIYYLECLFSVTSNTSIENYHNPKDAKNTDIDSNS
HHHHHHHHCCCCEEEEEEEHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
TFFRADFLECFEKFQLDKKITESDLKNIINRFSIPIWYFLKSDYFSIRYPKLIKTFFLSN
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEECHHHHHHHHHCC
TENFELFLSNYIVNNDNYVIPDNISTAELYNLCEWYIDESSNLNYLRLINQGIKDIQRLV
CCCCEEEEEEEEECCCCEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
IDAKLKLKAQRKIEQLEKVFLNSQSKKNSNGFLQSVAIYTDRKKYLTSEKSELKILIDVD
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEEEEEECCHHHHCCCCCCEEEEEEEC
DIKTHSSFESLLNYLMYMDYFFNENWILNLGSFPNFESSTLTRLFYGPKTRKNYETSFYF
CCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHEEECCCCCCCCCEEEEE
HNKDLLVKQAFKGFQHILDENLGLRIEDLINYFFEKYCENNFEIEWLPIRFAGEKEKINI
ECCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEE
QTKNLFTIEEQIRKQWNLLIDEGEIDKDLFALESTPRIYDLGSFLHKKYIYLNEENKDIK
EECCEEEHHHHHHHHHCEEEECCCCCCHHHHHCCCCCHHHHHHHHHHEEEEECCCCHHHH
KVLELLFSDQSHLNTVKVTDGYLHENSFIQLLEKHNINYSFFENYQRQDINYLIENNIIT
HHHHHHHCCCCCCCEEEEECCEECCHHHHHHHHHCCCCHHHHHHHHHCCCCEEEECCEEE
KRKDDVIYVNKKQMRRIRIFSMIFNYGVINYYNGLTKISRKVDLKQQQNEIDEILEEGLL
ECCCCEEEECHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
IYKDTLFSKPESDYLNYLLNDSEFDNALGIRNKYLHGSVFEDNVEDLLYALIILTIYVIK
EEEHHHCCCCCHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEE
INEELILNKHYDNKDK
ECCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA