Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

Click here to switch to the map view.

The map label for this gene is lacX [H]

Identifier: 116492724

GI number: 116492724

Start: 963999

End: 964880

Strand: Reverse

Name: lacX [H]

Synonym: PEPE_0961

Alternate gene names: 116492724

Gene position: 964880-963999 (Counterclockwise)

Preceding gene: 116492725

Following gene: 116492722

Centisome position: 52.66

GC content: 38.21

Gene sequence:

>882_bases
ATGACGGTTACTTTAAAAAATGACTATTTAACAGTCCAAATTAACGAAAAAGGGGCCGAGTTATCCAGTGTTAAGGCTAA
TGATGGGATTGAATACATTTGGCAAGCCGACCCTGCAGTATGGGGCCGACATGCCCCAGTGTTATTTCCCTTTGTTGGAC
GTCTAAAGGATGACCAATTCCAAGTGGAGGATCAAACTTATCCTATGGGTCAACATGGATTTGCGCGGGATATGGATTTT
GAAGCAGTTGAACAAGATGATCAACACGTAATTATGGAATTAAATAGCGATACAGAAACTCTTCAAAAATTTCCATTTGA
GTTTAAACTACGTTTGCACTTCACATTAAAGGATCATGAATTGATCGAGCATTACGAAGTAGTTAATCCTGATTCTAAAA
AAGATTTATTATTTTCGATTGGCGGGCACCCTGGATTTAATCTAAATCTTGGAGATAACCAAATTCAGATGGAAGATACT
CATATTCGAATCGCGCCTAAACAAGTGTATAATCAAATTCCACTTAAGGCACCTTACACGGATCCTAAAAACCCTATCAA
GTTTGATGCTACAACTCCGCTTGATTTAACGCATGCGCTCTTTAAAGATGACGCCATCATCTTGGACCTTAAGGGAGAAC
AAATCACCTTAATGACCGAAAATGAAGTGAATAATCACGGTATTGCGTTTACGGTTGCTAACGCTCCATACCTTGGTATT
TGGTCACCATATCCAGCCACTGCTAATTTTGTTTGTTTAGAACCGTGGTGGGGAATTGCTGATACTGTCAATTTCAATGG
TGAATTAAAAGATAAGCTTGGTGTAAATCGTTTAGCTGCACAAGAAACATTTAATCAAGAATTTTCAATGTCATTCTTCT
AA

Upstream 100 bases:

>100_bases
AAGTAACGATTACTGAAAAATATGTTGATGACAAAATCGGTAGCATTGCACAAAATAAAGATCTGAGCGAGTTTATCTTA
TAGTAGGAGGATTTTGACCG

Downstream 100 bases:

>100_bases
AAAGAAAACCCCTAAAGGGTCAGGTTCGCGAGTTAGTAAGGCGAAACCTAATCTTTTAGGGGTTTTGTATGTAATTCAAA
CCGCAGCTACTTATTTTTCT

Product: galactose mutarotase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MTVTLKNDYLTVQINEKGAELSSVKANDGIEYIWQADPAVWGRHAPVLFPFVGRLKDDQFQVEDQTYPMGQHGFARDMDF
EAVEQDDQHVIMELNSDTETLQKFPFEFKLRLHFTLKDHELIEHYEVVNPDSKKDLLFSIGGHPGFNLNLGDNQIQMEDT
HIRIAPKQVYNQIPLKAPYTDPKNPIKFDATTPLDLTHALFKDDAIILDLKGEQITLMTENEVNNHGIAFTVANAPYLGI
WSPYPATANFVCLEPWWGIADTVNFNGELKDKLGVNRLAAQETFNQEFSMSFF

Sequences:

>Translated_293_residues
MTVTLKNDYLTVQINEKGAELSSVKANDGIEYIWQADPAVWGRHAPVLFPFVGRLKDDQFQVEDQTYPMGQHGFARDMDF
EAVEQDDQHVIMELNSDTETLQKFPFEFKLRLHFTLKDHELIEHYEVVNPDSKKDLLFSIGGHPGFNLNLGDNQIQMEDT
HIRIAPKQVYNQIPLKAPYTDPKNPIKFDATTPLDLTHALFKDDAIILDLKGEQITLMTENEVNNHGIAFTVANAPYLGI
WSPYPATANFVCLEPWWGIADTVNFNGELKDKLGVNRLAAQETFNQEFSMSFF
>Mature_292_residues
TVTLKNDYLTVQINEKGAELSSVKANDGIEYIWQADPAVWGRHAPVLFPFVGRLKDDQFQVEDQTYPMGQHGFARDMDFE
AVEQDDQHVIMELNSDTETLQKFPFEFKLRLHFTLKDHELIEHYEVVNPDSKKDLLFSIGGHPGFNLNLGDNQIQMEDTH
IRIAPKQVYNQIPLKAPYTDPKNPIKFDATTPLDLTHALFKDDAIILDLKGEQITLMTENEVNNHGIAFTVANAPYLGIW
SPYPATANFVCLEPWWGIADTVNFNGELKDKLGVNRLAAQETFNQEFSMSFF

Specific function: Unknown

COG id: COG2017

COG function: function code G; Galactose mutarotase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008183
- InterPro:   IPR011013
- InterPro:   IPR014718 [H]

Pfam domain/function: PF01263 Aldose_epim [H]

EC number: NA

Molecular weight: Translated: 33436; Mature: 33305

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVTLKNDYLTVQINEKGAELSSVKANDGIEYIWQADPAVWGRHAPVLFPFVGRLKDDQF
CEEEEECCEEEEEECCCCCEEEEEECCCCEEEEEECCCCCCCCCCCEEEHHHCCCCCCCE
QVEDQTYPMGQHGFARDMDFEAVEQDDQHVIMELNSDTETLQKFPFEFKLRLHFTLKDHE
EECCCCCCCCCCCCCCCCCCHHHCCCCCEEEEEECCCHHHHHHCCEEEEEEEEEEECCHH
LIEHYEVVNPDSKKDLLFSIGGHPGFNLNLGDNQIQMEDTHIRIAPKQVYNQIPLKAPYT
HHHHHEECCCCCCCEEEEEECCCCCEEEECCCCEEEEECCEEEEEHHHHHHCCCCCCCCC
DPKNPIKFDATTPLDLTHALFKDDAIILDLKGEQITLMTENEVNNHGIAFTVANAPYLGI
CCCCCEEECCCCCHHHHHHHHCCCEEEEEECCCEEEEEECCCCCCCCEEEEECCCCEEEE
WSPYPATANFVCLEPWWGIADTVNFNGELKDKLGVNRLAAQETFNQEFSMSFF
ECCCCCCCCEEEECCCCCCEEEEECCCCCHHHCCCHHHHHHHHCCCCEEEECC
>Mature Secondary Structure 
TVTLKNDYLTVQINEKGAELSSVKANDGIEYIWQADPAVWGRHAPVLFPFVGRLKDDQF
EEEEECCEEEEEECCCCCEEEEEECCCCEEEEEECCCCCCCCCCCEEEHHHCCCCCCCE
QVEDQTYPMGQHGFARDMDFEAVEQDDQHVIMELNSDTETLQKFPFEFKLRLHFTLKDHE
EECCCCCCCCCCCCCCCCCCHHHCCCCCEEEEEECCCHHHHHHCCEEEEEEEEEEECCHH
LIEHYEVVNPDSKKDLLFSIGGHPGFNLNLGDNQIQMEDTHIRIAPKQVYNQIPLKAPYT
HHHHHEECCCCCCCEEEEEECCCCCEEEECCCCEEEEECCEEEEEHHHHHHCCCCCCCCC
DPKNPIKFDATTPLDLTHALFKDDAIILDLKGEQITLMTENEVNNHGIAFTVANAPYLGI
CCCCCEEECCCCCHHHHHHHHCCCEEEEEECCCEEEEEECCCCCCCCEEEEECCCCEEEE
WSPYPATANFVCLEPWWGIADTVNFNGELKDKLGVNRLAAQETFNQEFSMSFF
ECCCCCCCCEEEECCCCCCEEEEECCCCCHHHCCCHHHHHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1339371 [H]