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The map label for this gene is comFC [H]

Identifier: 116492229

GI number: 116492229

Start: 477154

End: 477585

Strand: Direct

Name: comFC [H]

Synonym: PEPE_0426

Alternate gene names: 116492229

Gene position: 477154-477585 (Clockwise)

Preceding gene: 116492228

Following gene: 116492230

Centisome position: 26.04

GC content: 38.43

Gene sequence:

>432_bases
ATGCGTAATTTTTTTCAGCACTATAAGTTTCAGGGAGATTATTTACTGAGAAAAGTTTTTCAAGATCAATTTGTTAATTT
TATTCAAAAGATCCTTAAAGAAAACGAGTTGATTGTTCCGATCCCAGTTGATGAGAGTACAATGACCTCACGTGGATTTA
ACCAAGTAACTGGATTGATGGAAGGTCTGGATTGGAAAGATGTTTTGATTAATCAGCGCTCAAACGATAGTTTACATCAA
TTTCAACGTTCAAGAAGAGAGCGACTACAGCAAGATAGTTCTTTTATTTTGAAAAGCGGATGTGATATTAGTGGTGAACA
TATTTTGTTGGTGGACGATATTTATACGACCGGAGCCACCCTTCGACAAGCTCGGACCACTTTACTAAGAAATGGCGCGA
CCCAAGTCCGTTCAGTCACGCTTTGTCGGTAG

Upstream 100 bases:

>100_bases
TATTAGATGTGGAAAACTTTCAGCAATTCTCGAGTGTGCGGACTGTCAACAATGGAATGATCAGTTCGTAAATCGAGCCA
TGTTTCAATATGATGAGGCG

Downstream 100 bases:

>100_bases
TTATTTGGGTATATTCATTGTTTATTGTAGCGTTTTCATTTATAATGAAGTTGTACAGAAATACATGAAGTAGAATATAT
ATTTCTGTTAGTGGATGCAG

Product: amidophosphoribosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MRNFFQHYKFQGDYLLRKVFQDQFVNFIQKILKENELIVPIPVDESTMTSRGFNQVTGLMEGLDWKDVLINQRSNDSLHQ
FQRSRRERLQQDSSFILKSGCDISGEHILLVDDIYTTGATLRQARTTLLRNGATQVRSVTLCR

Sequences:

>Translated_143_residues
MRNFFQHYKFQGDYLLRKVFQDQFVNFIQKILKENELIVPIPVDESTMTSRGFNQVTGLMEGLDWKDVLINQRSNDSLHQ
FQRSRRERLQQDSSFILKSGCDISGEHILLVDDIYTTGATLRQARTTLLRNGATQVRSVTLCR
>Mature_143_residues
MRNFFQHYKFQGDYLLRKVFQDQFVNFIQKILKENELIVPIPVDESTMTSRGFNQVTGLMEGLDWKDVLINQRSNDSLHQ
FQRSRRERLQQDSSFILKSGCDISGEHILLVDDIYTTGATLRQARTTLLRNGATQVRSVTLCR

Specific function: Involved in transformation (competence for DNA uptake) [H]

COG id: COG1040

COG function: function code R; Predicted amidophosphoribosyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ComF/GntX family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005222
- InterPro:   IPR000836 [H]

Pfam domain/function: PF00156 Pribosyltran [H]

EC number: NA

Molecular weight: Translated: 16686; Mature: 16686

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNFFQHYKFQGDYLLRKVFQDQFVNFIQKILKENELIVPIPVDESTMTSRGFNQVTGLM
CCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHCCHHHHHHHH
EGLDWKDVLINQRSNDSLHQFQRSRRERLQQDSSFILKSGCDISGEHILLVDDIYTTGAT
HCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHCCHH
LRQARTTLLRNGATQVRSVTLCR
HHHHHHHHHHCCHHHHHHHHCCC
>Mature Secondary Structure
MRNFFQHYKFQGDYLLRKVFQDQFVNFIQKILKENELIVPIPVDESTMTSRGFNQVTGLM
CCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHCCHHHHHHHH
EGLDWKDVLINQRSNDSLHQFQRSRRERLQQDSSFILKSGCDISGEHILLVDDIYTTGAT
HCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHCCHH
LRQARTTLLRNGATQVRSVTLCR
HHHHHHHHHHCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8412657; 8045879; 9384377 [H]