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The map label for this gene is yhbH [C]

Identifier: 116492230

GI number: 116492230

Start: 477716

End: 478270

Strand: Direct

Name: yhbH [C]

Synonym: PEPE_0427

Alternate gene names: 116492230

Gene position: 477716-478270 (Clockwise)

Preceding gene: 116492229

Following gene: 116492231

Centisome position: 26.07

GC content: 38.2

Gene sequence:

>555_bases
ATGCTTGATTTTAATGTACGTGGTGAAAATATTGAGGTAACAGAAGCAATTCGGGATTATGTTGAGAAACGAATTGGTAA
GATTGAAAAATACTTTGAACAAGGTGCCAATCCAAAGGCTCACGTTAACTTGAAAGTATACCAAGACAAAACGGCTAAGG
TTGAAGTAACGATTCCATTGCCATACTTGGTATTACGAGCAGAAGAAACTTCGCCTGATTTATATGCGAGTGTTGACTTA
GTAACTGATAAATTGGAACGTCAACTACGTAAATACAAAACAAAAATTAACCGCAAATCGCGTGAAACAGGATACAAAGG
GGTTGAAATCCCTAGTGGTGATATTGTAGAGAACGAAGAGGAAGCCAGTCAATTTGATATCGTTCGTACTAAACAAGTAT
CCTTGAAACCAATGGGAAGTGAAGAAGCAATCTTGCAAATGGACATGCTAGGACATAACTTCTTTATCTATGAAGATGCA
GAAAGTGGATCAGTTGATATTGTTTATCGCCGTCGCGATGGACGCTATGGTTTGATCGAATCTGCTAACGATTAG

Upstream 100 bases:

>100_bases
CGTTTTCATTTATAATGAAGTTGTACAGAAATACATGAAGTAGAATATATATTTCTGTTAGTGGATGCAGTTTATCCACA
GTTGAAAGGAGAGAAGTCTT

Downstream 100 bases:

>100_bases
ATCCGCTAAATAAATACAAAACAAAATTGCTTAACAAACTTCCAACGGTTTGTTAAGCTTTTTAAATATATTTAAGATTA
GTTTGATTGTAATAATAAAA

Product: SSU ribosomal protein S30P / sigma 54 modulation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MLDFNVRGENIEVTEAIRDYVEKRIGKIEKYFEQGANPKAHVNLKVYQDKTAKVEVTIPLPYLVLRAEETSPDLYASVDL
VTDKLERQLRKYKTKINRKSRETGYKGVEIPSGDIVENEEEASQFDIVRTKQVSLKPMGSEEAILQMDMLGHNFFIYEDA
ESGSVDIVYRRRDGRYGLIESAND

Sequences:

>Translated_184_residues
MLDFNVRGENIEVTEAIRDYVEKRIGKIEKYFEQGANPKAHVNLKVYQDKTAKVEVTIPLPYLVLRAEETSPDLYASVDL
VTDKLERQLRKYKTKINRKSRETGYKGVEIPSGDIVENEEEASQFDIVRTKQVSLKPMGSEEAILQMDMLGHNFFIYEDA
ESGSVDIVYRRRDGRYGLIESAND
>Mature_184_residues
MLDFNVRGENIEVTEAIRDYVEKRIGKIEKYFEQGANPKAHVNLKVYQDKTAKVEVTIPLPYLVLRAEETSPDLYASVDL
VTDKLERQLRKYKTKINRKSRETGYKGVEIPSGDIVENEEEASQFDIVRTKQVSLKPMGSEEAILQMDMLGHNFFIYEDA
ESGSVDIVYRRRDGRYGLIESAND

Specific function: Probably Modulates The Activity Of Sigma(54) (Rpon). [C]

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S30Ae family [H]

Homologues:

Organism=Escherichia coli, GI1789595, Length=97, Percent_Identity=34.020618556701, Blast_Score=60, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003489 [H]

Pfam domain/function: PF02482 Ribosomal_S30AE [H]

EC number: NA

Molecular weight: Translated: 21156; Mature: 21156

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDFNVRGENIEVTEAIRDYVEKRIGKIEKYFEQGANPKAHVNLKVYQDKTAKVEVTIPL
CCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCEEEEEEECC
PYLVLRAEETSPDLYASVDLVTDKLERQLRKYKTKINRKSRETGYKGVEIPSGDIVENEE
CEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCH
EASQFDIVRTKQVSLKPMGSEEAILQMDMLGHNFFIYEDAESGSVDIVYRRRDGRYGLIE
HHHHEEEEEECEEEECCCCCCHHEEEEEECCCEEEEEECCCCCCEEEEEEECCCCEEECC
SAND
CCCC
>Mature Secondary Structure
MLDFNVRGENIEVTEAIRDYVEKRIGKIEKYFEQGANPKAHVNLKVYQDKTAKVEVTIPL
CCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCEEEEEEECC
PYLVLRAEETSPDLYASVDLVTDKLERQLRKYKTKINRKSRETGYKGVEIPSGDIVENEE
CEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCH
EASQFDIVRTKQVSLKPMGSEEAILQMDMLGHNFFIYEDAESGSVDIVYRRRDGRYGLIE
HHHHEEEEEECEEEECCCCCCHHEEEEEECCCEEEEEECCCCCCEEEEEEECCCCEEECC
SAND
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA