| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116492160
Identifier: 116492160
GI number: 116492160
Start: 403998
End: 404468
Strand: Direct
Name: 116492160
Synonym: PEPE_0357
Alternate gene names: NA
Gene position: 403998-404468 (Clockwise)
Preceding gene: 116492156
Following gene: 116492161
Centisome position: 22.05
GC content: 31.0
Gene sequence:
>471_bases ATGAAAGTATTAGCAAGTGAAGTTATCCAAACATTGAAAGATGCCAGTTTTAAATCAGAGGAATTTAAAATTGGGAAAAC AACTTTAAAAAAAGCCGACGGTACAGGATTTAAACCTGCTTTAGATTTTTTGAAACAGGCCATTCAAGAAAGCCCAATTG CTGAAGCAGTTATTAATGTTAATAAAAGTGTGGTTATTAAAATTCAATCTAATATTATTAATTTACCATTGCTTTATCCT GGTCCTGTGGAAAAACTAACTGAAGCAGAAAAAGAATATGATGTTAATATTTATGCAGTAATTGAAGCAGAAAAAATTAA TTCGTCTCATTTACGAATTGACCAAATTGGGACAGCAGAAGATCTAATTAGTGCTAATTCTGATTTACAAGCTAATTTTA AGGATTGGATGGCGGAACAATTTGATCGATTAGATCATCCGGATAAGGATCAAAAAGATAATGAGGAATAA
Upstream 100 bases:
>100_bases AATTATAGTGATATTGGAGTGCGATACGCAATATATCTATGTAAAAAAGGGCTTTTAGATGTTAAACTCATAGTTAGAAA ACAAAAAAACGAGGGACAAA
Downstream 100 bases:
>100_bases AATAGGAGGTTCCTATGAAGAGATTTGAGCTAATAGTTGGAACAGCAATCGTAATTGCATTCTCTACATTAATCCTCTCC ATCTACACTCATCATCAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MKVLASEVIQTLKDASFKSEEFKIGKTTLKKADGTGFKPALDFLKQAIQESPIAEAVINVNKSVVIKIQSNIINLPLLYP GPVEKLTEAEKEYDVNIYAVIEAEKINSSHLRIDQIGTAEDLISANSDLQANFKDWMAEQFDRLDHPDKDQKDNEE
Sequences:
>Translated_156_residues MKVLASEVIQTLKDASFKSEEFKIGKTTLKKADGTGFKPALDFLKQAIQESPIAEAVINVNKSVVIKIQSNIINLPLLYP GPVEKLTEAEKEYDVNIYAVIEAEKINSSHLRIDQIGTAEDLISANSDLQANFKDWMAEQFDRLDHPDKDQKDNEE >Mature_156_residues MKVLASEVIQTLKDASFKSEEFKIGKTTLKKADGTGFKPALDFLKQAIQESPIAEAVINVNKSVVIKIQSNIINLPLLYP GPVEKLTEAEKEYDVNIYAVIEAEKINSSHLRIDQIGTAEDLISANSDLQANFKDWMAEQFDRLDHPDKDQKDNEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17491; Mature: 17491
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLASEVIQTLKDASFKSEEFKIGKTTLKKADGTGFKPALDFLKQAIQESPIAEAVINV CCCHHHHHHHHHHCCCCCCCCEECCHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHCC NKSVVIKIQSNIINLPLLYPGPVEKLTEAEKEYDVNIYAVIEAEKINSSHLRIDQIGTAE CCEEEEEEECCEEECCEECCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCEEECCCCCHH DLISANSDLQANFKDWMAEQFDRLDHPDKDQKDNEE HHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MKVLASEVIQTLKDASFKSEEFKIGKTTLKKADGTGFKPALDFLKQAIQESPIAEAVINV CCCHHHHHHHHHHCCCCCCCCEECCHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHCC NKSVVIKIQSNIINLPLLYPGPVEKLTEAEKEYDVNIYAVIEAEKINSSHLRIDQIGTAE CCEEEEEEECCEEECCEECCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCEEECCCCCHH DLISANSDLQANFKDWMAEQFDRLDHPDKDQKDNEE HHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA