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The map label for this gene is yciB [H]

Identifier: 116492161

GI number: 116492161

Start: 404483

End: 405148

Strand: Direct

Name: yciB [H]

Synonym: PEPE_0358

Alternate gene names: 116492161

Gene position: 404483-405148 (Clockwise)

Preceding gene: 116492160

Following gene: 116492162

Centisome position: 22.07

GC content: 39.19

Gene sequence:

>666_bases
ATGAAGAGATTTGAGCTAATAGTTGGAACAGCAATCGTAATTGCATTCTCTACATTAATCCTCTCCATCTACACTCATCA
TCAGCAAGTAATTCAGCAAGAAAAAGTGGAGTTACAAAAATCAGCCAAAAAGAAATCGCTGCCTAAGAGCACTTCTAAAG
ATAGTGGGTTAGCTGGAGATGAAATTCAAGCTGCAACCACAAAATCAAAAAAGGGCGAAATGAACCCAATTAATTGGAAA
AAGTCTTCTGAAAACAAAGCTTATCCAGATTTAGATAAGTATCCGAAAGCTTTCTTGAAGGTATCGATTGCTAAACAACG
AGTGTATGTGATGAACGGAAAAAAAGTTTTATATACTATGTACGCGTCGACTGGATCGCATGAAAGTCCAACCCCAACGG
GGACTTTTAAGATTCAGGCCGAGCGAGGCGACTTCTTCTATAATCCAACTTCAAAGGAAGGCGCTAAGTACTGGGTATCC
TTTAAAGATCATGGAATCTATCTATTCCATACTGTTCCAACCGATAAAAACGGAAAATTCCTTGAGGATGAAGCTGAACA
GTTAGGGAAAGAAGCTCAATCACATGGTTGTGTGCGTTTGGCGGTTCCAGATGCAAAATGGATTTACGAAAAAGTACCGG
AGGGTATGAAAGTTGAAATACATTAG

Upstream 100 bases:

>100_bases
TACAAGCTAATTTTAAGGATTGGATGGCGGAACAATTTGATCGATTAGATCATCCGGATAAGGATCAAAAAGATAATGAG
GAATAAAATAGGAGGTTCCT

Downstream 100 bases:

>100_bases
GATTGTTCAAACATGGTTGTTGAAAAAGCGTCATTTTAAAGACGAAATTTTATGGGGAATTGGCATCTTAGTGGGGTTGT
TACTAATATTTAAAATTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MKRFELIVGTAIVIAFSTLILSIYTHHQQVIQQEKVELQKSAKKKSLPKSTSKDSGLAGDEIQAATTKSKKGEMNPINWK
KSSENKAYPDLDKYPKAFLKVSIAKQRVYVMNGKKVLYTMYASTGSHESPTPTGTFKIQAERGDFFYNPTSKEGAKYWVS
FKDHGIYLFHTVPTDKNGKFLEDEAEQLGKEAQSHGCVRLAVPDAKWIYEKVPEGMKVEIH

Sequences:

>Translated_221_residues
MKRFELIVGTAIVIAFSTLILSIYTHHQQVIQQEKVELQKSAKKKSLPKSTSKDSGLAGDEIQAATTKSKKGEMNPINWK
KSSENKAYPDLDKYPKAFLKVSIAKQRVYVMNGKKVLYTMYASTGSHESPTPTGTFKIQAERGDFFYNPTSKEGAKYWVS
FKDHGIYLFHTVPTDKNGKFLEDEAEQLGKEAQSHGCVRLAVPDAKWIYEKVPEGMKVEIH
>Mature_221_residues
MKRFELIVGTAIVIAFSTLILSIYTHHQQVIQQEKVELQKSAKKKSLPKSTSKDSGLAGDEIQAATTKSKKGEMNPINWK
KSSENKAYPDLDKYPKAFLKVSIAKQRVYVMNGKKVLYTMYASTGSHESPTPTGTFKIQAERGDFFYNPTSKEGAKYWVS
FKDHGIYLFHTVPTDKNGKFLEDEAEQLGKEAQSHGCVRLAVPDAKWIYEKVPEGMKVEIH

Specific function: Unknown

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 24923; Mature: 24923

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFELIVGTAIVIAFSTLILSIYTHHQQVIQQEKVELQKSAKKKSLPKSTSKDSGLAGD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
EIQAATTKSKKGEMNPINWKKSSENKAYPDLDKYPKAFLKVSIAKQRVYVMNGKKVLYTM
CCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEEECCCEEEEEE
YASTGSHESPTPTGTFKIQAERGDFFYNPTSKEGAKYWVSFKDHGIYLFHTVPTDKNGKF
EECCCCCCCCCCCCEEEEEEECCCEEECCCCCCCCEEEEEEECCCEEEEEECCCCCCCCC
LEDEAEQLGKEAQSHGCVRLAVPDAKWIYEKVPEGMKVEIH
CHHHHHHHHHHHHHCCEEEEECCCHHHHHHHCCCCCEEEEC
>Mature Secondary Structure
MKRFELIVGTAIVIAFSTLILSIYTHHQQVIQQEKVELQKSAKKKSLPKSTSKDSGLAGD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
EIQAATTKSKKGEMNPINWKKSSENKAYPDLDKYPKAFLKVSIAKQRVYVMNGKKVLYTM
CCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEEECCCEEEEEE
YASTGSHESPTPTGTFKIQAERGDFFYNPTSKEGAKYWVSFKDHGIYLFHTVPTDKNGKF
EECCCCCCCCCCCCEEEEEEECCCEEECCCCCCCCEEEEEEECCCEEEEEECCCCCCCCC
LEDEAEQLGKEAQSHGCVRLAVPDAKWIYEKVPEGMKVEIH
CHHHHHHHHHHHHHCCEEEEECCCHHHHHHHCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]