| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is nox [H]
Identifier: 116492089
GI number: 116492089
Start: 329881
End: 331221
Strand: Direct
Name: nox [H]
Synonym: PEPE_0285
Alternate gene names: 116492089
Gene position: 329881-331221 (Clockwise)
Preceding gene: 116492088
Following gene: 116492090
Centisome position: 18.0
GC content: 39.08
Gene sequence:
>1341_bases ATGAAAATAGCAATTGTAGGTTGTACACATGCAGGTACCTTCTCAGCGCAACAAATTTTAACTGAGCACCCCGATTATGA AGTAACGGTATACGAACGTAATAATAATTTGTCATTTTTATCTTGTGGAATCGCCCTTTGGGTAGGTAACCACGTTTCAG ATCCTAATAAAATGTTCTATTCATCACCGGAGGCCCTAACTAAGTTGGGTGCTACTATGAATATGGAACATGATGTACTT AGTATCGACCCCGATAATAAAACTTTAGAAGTAAAAGATTTAAAAACCGGTGAAATTAAAACAGATACTTACGATAAATT GGTGGTAACTACTGGTTCAGCACCTATTATTCCTCCGATTGATGGAATCGATAATAAACGAGTTAAACTTTGCAAAAATT GGGCTCATGCTGCGGAATTAAAACGAATTGATGATGACATTAACTCAGTAATTGTAATTGGTGCAGGTTATATTGGAGCG GAACTTGCTGAACAATATGCCTTGACTGGCCGCGAAGTAACCTTGATTGATGGATTACCAAGTGTTTTAGCTAAGAATTT TGATCCTGAAATCTCTGATCGAGTAGCTAAAGATTACACTGATCACGGAGTTAAATTGGCCATGAACGAAATGGTTCAAG GATTTAGTGGTGATGATCAGATTACTGTAAAAACCGATAAAGGCAGTTACACGGCCGACTATGCTGTACTTTGCGTTGGT TTCCGCCCACATACAGAATTATTGAAGGGCAAAGTGGATATGTTGAAGAACGGAGCAATTATTACTAATGAGTACATGCA AACTTCGAACCTTGATATTTTTGCAGCAGGAGATTCATCCGTTGTTCATTACAATCCAACTGGAAAAGATGATTACATTC CATTAGCAACTAATGCAGTTCGTCAAGGAATTTTGATTGGACATAACATTGAAAAACCAACGATGAAATATCTTGGTACA CAAGCAAGCTCGGCAGTAGCACTCTTTGGTAAGACGATGGCAAGTTCAGGATTAACTGTTGGTGCGGCTAAAGCACGGGG TGTAGAAGTAGACTCTGTAACCTTAGAACAAGACTACCGTCCCGAATTTATGCTTTCAACGACCCCAATCCTAATGCGGT TAGTTTGGGACCCAGAAACACGAGTGGTTCTAGGTGGATCATTCTATAGCGAATATGACTGTGCTCAATCAGCTAATGTA ATTTCATTAGCTATTCAAAATAAGATGACGATTGATGACTTATCCATGGTTGATATGTTCTTCCAACCTAACTACGACCA ACCGTTAAATTATATTAATGCGTTAGCAATGACGGCGGTGGCCCAAGCGGATGCAAAATAA
Upstream 100 bases:
>100_bases TTATTGTTTCATTTTTTTGTTCTAAAGGACCAGAGTTAAGTTGACAAAGCAATGAAAGCGCTTAATAATTAGATATAGAC AAATAGGAGGTTAGTTAATT
Downstream 100 bases:
>100_bases ATAATAAAATAGTTCAAAGAGGCGAAGGATGATGGCAAACAAAACCAAAGTTGCATTAGTAACGGGAGCAGGACAAGGAA TTGGGGCAGCAATTGCGACC
Product: NAD(FAD)-dependent dehydrogenase
Products: NA
Alternate protein names: NOXase [H]
Number of amino acids: Translated: 446; Mature: 446
Protein sequence:
>446_residues MKIAIVGCTHAGTFSAQQILTEHPDYEVTVYERNNNLSFLSCGIALWVGNHVSDPNKMFYSSPEALTKLGATMNMEHDVL SIDPDNKTLEVKDLKTGEIKTDTYDKLVVTTGSAPIIPPIDGIDNKRVKLCKNWAHAAELKRIDDDINSVIVIGAGYIGA ELAEQYALTGREVTLIDGLPSVLAKNFDPEISDRVAKDYTDHGVKLAMNEMVQGFSGDDQITVKTDKGSYTADYAVLCVG FRPHTELLKGKVDMLKNGAIITNEYMQTSNLDIFAAGDSSVVHYNPTGKDDYIPLATNAVRQGILIGHNIEKPTMKYLGT QASSAVALFGKTMASSGLTVGAAKARGVEVDSVTLEQDYRPEFMLSTTPILMRLVWDPETRVVLGGSFYSEYDCAQSANV ISLAIQNKMTIDDLSMVDMFFQPNYDQPLNYINALAMTAVAQADAK
Sequences:
>Translated_446_residues MKIAIVGCTHAGTFSAQQILTEHPDYEVTVYERNNNLSFLSCGIALWVGNHVSDPNKMFYSSPEALTKLGATMNMEHDVL SIDPDNKTLEVKDLKTGEIKTDTYDKLVVTTGSAPIIPPIDGIDNKRVKLCKNWAHAAELKRIDDDINSVIVIGAGYIGA ELAEQYALTGREVTLIDGLPSVLAKNFDPEISDRVAKDYTDHGVKLAMNEMVQGFSGDDQITVKTDKGSYTADYAVLCVG FRPHTELLKGKVDMLKNGAIITNEYMQTSNLDIFAAGDSSVVHYNPTGKDDYIPLATNAVRQGILIGHNIEKPTMKYLGT QASSAVALFGKTMASSGLTVGAAKARGVEVDSVTLEQDYRPEFMLSTTPILMRLVWDPETRVVLGGSFYSEYDCAQSANV ISLAIQNKMTIDDLSMVDMFFQPNYDQPLNYINALAMTAVAQADAK >Mature_446_residues MKIAIVGCTHAGTFSAQQILTEHPDYEVTVYERNNNLSFLSCGIALWVGNHVSDPNKMFYSSPEALTKLGATMNMEHDVL SIDPDNKTLEVKDLKTGEIKTDTYDKLVVTTGSAPIIPPIDGIDNKRVKLCKNWAHAAELKRIDDDINSVIVIGAGYIGA ELAEQYALTGREVTLIDGLPSVLAKNFDPEISDRVAKDYTDHGVKLAMNEMVQGFSGDDQITVKTDKGSYTADYAVLCVG FRPHTELLKGKVDMLKNGAIITNEYMQTSNLDIFAAGDSSVVHYNPTGKDDYIPLATNAVRQGILIGHNIEKPTMKYLGT QASSAVALFGKTMASSGLTVGAAKARGVEVDSVTLEQDYRPEFMLSTTPILMRLVWDPETRVVLGGSFYSEYDCAQSANV ISLAIQNKMTIDDLSMVDMFFQPNYDQPLNYINALAMTAVAQADAK
Specific function: Catalyzes the four-electron reduction of molecular oxygen to water [H]
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-III pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI1789065, Length=183, Percent_Identity=32.7868852459016, Blast_Score=102, Evalue=5e-23, Organism=Escherichia coli, GI1788892, Length=183, Percent_Identity=23.4972677595628, Blast_Score=66, Evalue=4e-12, Organism=Caenorhabditis elegans, GI32565766, Length=192, Percent_Identity=29.1666666666667, Blast_Score=68, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR004099 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.6.99.3 [H]
Molecular weight: Translated: 48680; Mature: 48680
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIAIVGCTHAGTFSAQQILTEHPDYEVTVYERNNNLSFLSCGIALWVGNHVSDPNKMFY CEEEEEEECCCCCCHHHHHHHCCCCEEEEEEEECCCEEEEEEEEEEEECCCCCCCHHEEE SSPEALTKLGATMNMEHDVLSIDPDNKTLEVKDLKTGEIKTDTYDKLVVTTGSAPIIPPI CCHHHHHHHCCCCCCCCCEEEECCCCCEEEEEECCCCCEECCCCCEEEEEECCCCCCCCC DGIDNKRVKLCKNWAHAAELKRIDDDINSVIVIGAGYIGAELAEQYALTGREVTLIDGLP CCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCEEEEECCCH SVLAKNFDPEISDRVAKDYTDHGVKLAMNEMVQGFSGDDQITVKTDKGSYTADYAVLCVG HHHHCCCCCCHHHHHHHHHHCCCHHEEHHHHHCCCCCCCEEEEEECCCCCEECEEEEEEE FRPHTELLKGKVDMLKNGAIITNEYMQTSNLDIFAAGDSSVVHYNPTGKDDYIPLATNAV CCCHHHHHHCHHHHHHCCCEEEECCEECCCEEEEECCCCCEEEECCCCCCCEEECCHHHH RQGILIGHNIEKPTMKYLGTQASSAVALFGKTMASSGLTVGAAKARGVEVDSVTLEQDYR HCCEEEECCCCCCHHHHHCCCCCCHHHHHHHHHHCCCCEEECCCCCCEEEEEEEECCCCC PEFMLSTTPILMRLVWDPETRVVLGGSFYSEYDCAQSANVISLAIQNKMTIDDLSMVDMF CCEEEECCCEEEEEEECCCCCEEECCCCCCCHHHCCCCCEEEEEECCCCCCCHHHHHHHH FQPNYDQPLNYINALAMTAVAQADAK CCCCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKIAIVGCTHAGTFSAQQILTEHPDYEVTVYERNNNLSFLSCGIALWVGNHVSDPNKMFY CEEEEEEECCCCCCHHHHHHHCCCCEEEEEEEECCCEEEEEEEEEEEECCCCCCCHHEEE SSPEALTKLGATMNMEHDVLSIDPDNKTLEVKDLKTGEIKTDTYDKLVVTTGSAPIIPPI CCHHHHHHHCCCCCCCCCEEEECCCCCEEEEEECCCCCEECCCCCEEEEEECCCCCCCCC DGIDNKRVKLCKNWAHAAELKRIDDDINSVIVIGAGYIGAELAEQYALTGREVTLIDGLP CCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCEEEEECCCH SVLAKNFDPEISDRVAKDYTDHGVKLAMNEMVQGFSGDDQITVKTDKGSYTADYAVLCVG HHHHCCCCCCHHHHHHHHHHCCCHHEEHHHHHCCCCCCCEEEEEECCCCCEECEEEEEEE FRPHTELLKGKVDMLKNGAIITNEYMQTSNLDIFAAGDSSVVHYNPTGKDDYIPLATNAV CCCHHHHHHCHHHHHHCCCEEEECCEECCCEEEEECCCCCEEEECCCCCCCEEECCHHHH RQGILIGHNIEKPTMKYLGTQASSAVALFGKTMASSGLTVGAAKARGVEVDSVTLEQDYR HCCEEEECCCCCCHHHHHCCCCCCHHHHHHHHHHCCCCEEECCCCCCEEEEEEEECCCCC PEFMLSTTPILMRLVWDPETRVVLGGSFYSEYDCAQSANVISLAIQNKMTIDDLSMVDMF CCEEEECCCEEEEEEECCCCCEEECCCCCCCHHHCCCCCEEEEEECCCCCCCHHHHHHHH FQPNYDQPLNYINALAMTAVAQADAK CCCCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1404382; 12663927; 2511195; 8262333 [H]