Click here to switch to the map view.

The map label for this gene is pad1 [H]

Identifier: 116492055

GI number: 116492055

Start: 299073

End: 299669

Strand: Direct

Name: pad1 [H]

Synonym: PEPE_0251

Alternate gene names: 116492055

Gene position: 299073-299669 (Clockwise)

Preceding gene: 116492054

Following gene: 116492056

Centisome position: 16.32

GC content: 37.69

Gene sequence:

>597_bases
ATGAAGAAGATTGTTGTTGGAATTTCAGGAGCAAGCGGAACTATTTACGGAATTCGATTATTAGAAGTGTTGCATCGTAT
GCCAGATGTAGAAACCCATCTTGTTATGAGTCGCTGGGCAAAAGAAAATTTAGCCATTGAAGATACAGGTTATACGGAAT
CTCAACTTAAAGATTTAGCAGATTTTGTATATTCTGAGAAAAATATGGGTGCCACAGTTGCCAGTGGGAGTTTTATCCAT
GATGGAATGGTAATTATTCCAGCCAGCATGAAAACAATTGCTTCGGTTGCAACAGGGCTAGGTGAAAATTTAATTGCTAG
AGCTGCTGATGTGACCCTGAAAGAACAGCGACAGCTGATTGTCGTTCCTCGGGAATCACCATTCAATCAGATTCATTTAG
AAAATATGTTAAAGCTTTCTAAAATGGGGGTAGGAGTTATTCCGCCCATTCCTGCGTTTTATAATAATCCTAAAACGATT
GATGATATCGTTAACCATACGGTTATGAAAATCCTAGATCATTTGCATATTCAAAATGATGTTAGTTCGAGATGGGAGGG
ATTAGCTAATGCCCGAAAAAATAATCAAAAAAAGTAG

Upstream 100 bases:

>100_bases
AGTACCTTATGATATGCGAGATAAATTTAAACGTGCGGCTTTTAAAGAAATTGCAGATTGGAAAAAATATTTAGATTAAT
GTGGTAAGTGGAGGGAATAA

Downstream 100 bases:

>100_bases
TCAGAATAAGAATTCGTTCGAAGTTAACGTAACTCAGGCTGATTATACTATGACGGCTATGCTTGAACGCCAAAGTTTAG
ACTTATTGATTCAAATCATT

Product: 3-polyprenyl-4-hydroxybenzoate decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MKKIVVGISGASGTIYGIRLLEVLHRMPDVETHLVMSRWAKENLAIEDTGYTESQLKDLADFVYSEKNMGATVASGSFIH
DGMVIIPASMKTIASVATGLGENLIARAADVTLKEQRQLIVVPRESPFNQIHLENMLKLSKMGVGVIPPIPAFYNNPKTI
DDIVNHTVMKILDHLHIQNDVSSRWEGLANARKNNQKK

Sequences:

>Translated_198_residues
MKKIVVGISGASGTIYGIRLLEVLHRMPDVETHLVMSRWAKENLAIEDTGYTESQLKDLADFVYSEKNMGATVASGSFIH
DGMVIIPASMKTIASVATGLGENLIARAADVTLKEQRQLIVVPRESPFNQIHLENMLKLSKMGVGVIPPIPAFYNNPKTI
DDIVNHTVMKILDHLHIQNDVSSRWEGLANARKNNQKK
>Mature_198_residues
MKKIVVGISGASGTIYGIRLLEVLHRMPDVETHLVMSRWAKENLAIEDTGYTESQLKDLADFVYSEKNMGATVASGSFIH
DGMVIIPASMKTIASVATGLGENLIARAADVTLKEQRQLIVVPRESPFNQIHLENMLKLSKMGVGVIPPIPAFYNNPKTI
DDIVNHTVMKILDHLHIQNDVSSRWEGLANARKNNQKK

Specific function: Unknown

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl p-hydroxybenzoate / phenylacrylic acid decarboxylases family [H]

Homologues:

Organism=Escherichia coli, GI1788650, Length=189, Percent_Identity=43.9153439153439, Blast_Score=184, Evalue=3e-48,
Organism=Saccharomyces cerevisiae, GI6320746, Length=189, Percent_Identity=47.0899470899471, Blast_Score=192, Evalue=3e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003382
- InterPro:   IPR004507 [H]

Pfam domain/function: PF02441 Flavoprotein [H]

EC number: 4.1.1.-

Molecular weight: Translated: 21900; Mature: 21900

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIVVGISGASGTIYGIRLLEVLHRMPDVETHLVMSRWAKENLAIEDTGYTESQLKDLA
CCEEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
DFVYSEKNMGATVASGSFIHDGMVIIPASMKTIASVATGLGENLIARAADVTLKEQRQLI
HHHHCCCCCCCEECCCCEEECCEEEECCHHHHHHHHHHHCCHHHHHHHHHCHHHCCCCEE
VVPRESPFNQIHLENMLKLSKMGVGVIPPIPAFYNNPKTIDDIVNHTVMKILDHLHIQND
EEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
VSSRWEGLANARKNNQKK
HHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKKIVVGISGASGTIYGIRLLEVLHRMPDVETHLVMSRWAKENLAIEDTGYTESQLKDLA
CCEEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
DFVYSEKNMGATVASGSFIHDGMVIIPASMKTIASVATGLGENLIARAADVTLKEQRQLI
HHHHCCCCCCCEECCCCEEECCEEEECCHHHHHHHHHHHCCHHHHHHHHHCHHHCCCCEE
VVPRESPFNQIHLENMLKLSKMGVGVIPPIPAFYNNPKTIDDIVNHTVMKILDHLHIQND
EEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
VSSRWEGLANARKNNQKK
HHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carbon-Carbon Lyases; Carboxy-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10986240 [H]