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The map label for this gene is yigC [C]

Identifier: 116492054

GI number: 116492054

Start: 297576

End: 299051

Strand: Direct

Name: yigC [C]

Synonym: PEPE_0250

Alternate gene names: 116492054

Gene position: 297576-299051 (Clockwise)

Preceding gene: 116492053

Following gene: 116492055

Centisome position: 16.24

GC content: 39.36

Gene sequence:

>1476_bases
ATGACCGAACAACCATATGATTTAAGAAAAGTACTCGAAGAAATGAAAAAATTACCTGGACAATATCACGAAACCGATGT
TGAAATTGATCCAGATGCCGATTTAGCTGGTGTATATCGTTATATTGGAGCAGGCGGTACAGTAAAACGTCCAACAGCTG
AAGGACCAACGATGATGTTTAATAACGTCAAAGGATTTCCAGATAGCCGGGTTTTGATTGGACTTCAGGCTTCGAGAAAA
CGAGTGGGAAAAATTCTACACCATGATTATAAAACTTTAGGGCAGATGTTAAATGATGCAGTTTCGAATCCAATTGCTCC
GACGGAAGTTACAAGAGCAGAAGCTCCTGCGCAAGAAGTTGTTCATTTGGCATCCGATCCCGACTTCGATATTCGCAAGT
TATTAGCAGCGCCAACTAATACACAAGATGATGCAGGTCCATATATTACAATGGGTGTTGTTTACGGTCATAGTATGGAT
AAAAAACAAAGCGATGTTACCATCCATCGAATGGTTTTAGAAGACAAGGATACCATTGGTATGTACATTATGCCTGGTGG
ACGCCATATTGGGGCCTTTTTGAAAGAATACGAAGAACAAAATAAACCTATGCCTATCACTATTAATATTGGATTGGATC
CGGCTATTACAATTGGAGCTACCTTTGAGCCACCTACAACTCCATTAGGTTATAACGAACTTCAAGTAGCAGGAGCCCTA
AGAAATGAACCAGTTCAAGTAGTGCCAGGTGTAGAAGTCGATGCTTTAGGAATCGCTCGTTCAGAATGGATTATCGAAGC
TGAAATTATGCCAAATCAATCAATGCAAGAAGACATTAACACAAATTCAGGGTATGCCATGCCTGAATTTCCTGGTTATA
ATGGGACTGCTAATCCGGCTGTTAATGTTATAAAAATTAAAGCAGTAACTCATCGTAAGGACAAACCTATCGTTCAAACA
ACTATTGGACCTTCAGAAGAGCACGTTTCAATGGCAGGTATTCCAACAGAAGCCTCTATTTTAAGTTTAGTTGGTCGTGC
TATTCCAGGAAAAGTTTTGAATGTGTATAATGCGCCTGCTGGTGGTGGAAAATTAATGACGATTATGCAAATTCATAAAG
AAAACGAAGCGGATGAAGGTATCCAACGCCAAGCAGCTTTACTAGCGTTTTCTGCCTTTAAAGAATTAAAGACGGTTATT
TTAGTGGACGATGATGTCGATATTTTTGATTGGAACGATGTTATGTGGACCATTAATACTCGTTTCCAGGCTGATCGAGA
TATCATGGTACTGGAAGGAATGCGTAACCATCCGTTAGATCCATCAGAACTACCGGATTATGATCCAGCCCGAATTCGAG
TTCGAGGAATGAGTTCTAAATTAGTGCTTGATGGTACAGTACCTTATGATATGCGAGATAAATTTAAACGTGCGGCTTTT
AAAGAAATTGCAGATTGGAAAAAATATTTAGATTAA

Upstream 100 bases:

>100_bases
TATATTCCATAATGGAATGTATGGGGTTTTAGTTTGAATTGTTTCGTCGTCAAATTTAAATGATAATGACCTTGTAAAAT
AATTTAAGGAGGTTCGTAAG

Downstream 100 bases:

>100_bases
TGTGGTAAGTGGAGGGAATAAATGAAGAAGATTGTTGTTGGAATTTCAGGAGCAAGCGGAACTATTTACGGAATTCGATT
ATTAGAAGTGTTGCATCGTA

Product: 3-polyprenyl-4-hydroxybenzoate decarboxylase related decarboxylase

Products: 2-octaprenylphenol; CO2 [C]

Alternate protein names: NA

Number of amino acids: Translated: 491; Mature: 490

Protein sequence:

>491_residues
MTEQPYDLRKVLEEMKKLPGQYHETDVEIDPDADLAGVYRYIGAGGTVKRPTAEGPTMMFNNVKGFPDSRVLIGLQASRK
RVGKILHHDYKTLGQMLNDAVSNPIAPTEVTRAEAPAQEVVHLASDPDFDIRKLLAAPTNTQDDAGPYITMGVVYGHSMD
KKQSDVTIHRMVLEDKDTIGMYIMPGGRHIGAFLKEYEEQNKPMPITINIGLDPAITIGATFEPPTTPLGYNELQVAGAL
RNEPVQVVPGVEVDALGIARSEWIIEAEIMPNQSMQEDINTNSGYAMPEFPGYNGTANPAVNVIKIKAVTHRKDKPIVQT
TIGPSEEHVSMAGIPTEASILSLVGRAIPGKVLNVYNAPAGGGKLMTIMQIHKENEADEGIQRQAALLAFSAFKELKTVI
LVDDDVDIFDWNDVMWTINTRFQADRDIMVLEGMRNHPLDPSELPDYDPARIRVRGMSSKLVLDGTVPYDMRDKFKRAAF
KEIADWKKYLD

Sequences:

>Translated_491_residues
MTEQPYDLRKVLEEMKKLPGQYHETDVEIDPDADLAGVYRYIGAGGTVKRPTAEGPTMMFNNVKGFPDSRVLIGLQASRK
RVGKILHHDYKTLGQMLNDAVSNPIAPTEVTRAEAPAQEVVHLASDPDFDIRKLLAAPTNTQDDAGPYITMGVVYGHSMD
KKQSDVTIHRMVLEDKDTIGMYIMPGGRHIGAFLKEYEEQNKPMPITINIGLDPAITIGATFEPPTTPLGYNELQVAGAL
RNEPVQVVPGVEVDALGIARSEWIIEAEIMPNQSMQEDINTNSGYAMPEFPGYNGTANPAVNVIKIKAVTHRKDKPIVQT
TIGPSEEHVSMAGIPTEASILSLVGRAIPGKVLNVYNAPAGGGKLMTIMQIHKENEADEGIQRQAALLAFSAFKELKTVI
LVDDDVDIFDWNDVMWTINTRFQADRDIMVLEGMRNHPLDPSELPDYDPARIRVRGMSSKLVLDGTVPYDMRDKFKRAAF
KEIADWKKYLD
>Mature_490_residues
TEQPYDLRKVLEEMKKLPGQYHETDVEIDPDADLAGVYRYIGAGGTVKRPTAEGPTMMFNNVKGFPDSRVLIGLQASRKR
VGKILHHDYKTLGQMLNDAVSNPIAPTEVTRAEAPAQEVVHLASDPDFDIRKLLAAPTNTQDDAGPYITMGVVYGHSMDK
KQSDVTIHRMVLEDKDTIGMYIMPGGRHIGAFLKEYEEQNKPMPITINIGLDPAITIGATFEPPTTPLGYNELQVAGALR
NEPVQVVPGVEVDALGIARSEWIIEAEIMPNQSMQEDINTNSGYAMPEFPGYNGTANPAVNVIKIKAVTHRKDKPIVQTT
IGPSEEHVSMAGIPTEASILSLVGRAIPGKVLNVYNAPAGGGKLMTIMQIHKENEADEGIQRQAALLAFSAFKELKTVIL
VDDDVDIFDWNDVMWTINTRFQADRDIMVLEGMRNHPLDPSELPDYDPARIRVRGMSSKLVLDGTVPYDMRDKFKRAAFK
EIADWKKYLD

Specific function: Unknown

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=488, Percent_Identity=25, Blast_Score=106, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: NA

Molecular weight: Translated: 54350; Mature: 54219

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEQPYDLRKVLEEMKKLPGQYHETDVEIDPDADLAGVYRYIGAGGTVKRPTAEGPTMMF
CCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCCCCCCCEEEE
NNVKGFPDSRVLIGLQASRKRVGKILHHDYKTLGQMLNDAVSNPIAPTEVTRAEAPAQEV
CCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHH
VHLASDPDFDIRKLLAAPTNTQDDAGPYITMGVVYGHSMDKKQSDVTIHRMVLEDKDTIG
HHHCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEECCCCCEE
MYIMPGGRHIGAFLKEYEEQNKPMPITINIGLDPAITIGATFEPPTTPLGYNELQVAGAL
EEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCEEEEHHH
RNEPVQVVPGVEVDALGIARSEWIIEAEIMPNQSMQEDINTNSGYAMPEFPGYNGTANPA
CCCCEEEECCCEEEEEEEECCCEEEEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC
VNVIKIKAVTHRKDKPIVQTTIGPSEEHVSMAGIPTEASILSLVGRAIPGKVLNVYNAPA
EEEEEEEEEECCCCCCEEEEECCCCHHCEEECCCCCHHHHHHHHHHHCCCCEEEEECCCC
GGGKLMTIMQIHKENEADEGIQRQAALLAFSAFKELKTVILVDDDVDIFDWNDVMWTINT
CCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCEEECCCEEEEEEC
RFQADRDIMVLEGMRNHPLDPSELPDYDPARIRVRGMSSKLVLDGTVPYDMRDKFKRAAF
CCCCCCCEEEECCCCCCCCCHHHCCCCCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHH
KEIADWKKYLD
HHHHHHHHHCC
>Mature Secondary Structure 
TEQPYDLRKVLEEMKKLPGQYHETDVEIDPDADLAGVYRYIGAGGTVKRPTAEGPTMMF
CCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCCCCCCCEEEE
NNVKGFPDSRVLIGLQASRKRVGKILHHDYKTLGQMLNDAVSNPIAPTEVTRAEAPAQEV
CCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHH
VHLASDPDFDIRKLLAAPTNTQDDAGPYITMGVVYGHSMDKKQSDVTIHRMVLEDKDTIG
HHHCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEECCCCCEE
MYIMPGGRHIGAFLKEYEEQNKPMPITINIGLDPAITIGATFEPPTTPLGYNELQVAGAL
EEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCEEEEHHH
RNEPVQVVPGVEVDALGIARSEWIIEAEIMPNQSMQEDINTNSGYAMPEFPGYNGTANPA
CCCCEEEECCCEEEEEEEECCCEEEEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC
VNVIKIKAVTHRKDKPIVQTTIGPSEEHVSMAGIPTEASILSLVGRAIPGKVLNVYNAPA
EEEEEEEEEECCCCCCEEEEECCCCHHCEEECCCCCHHHHHHHHHHHCCCCEEEEECCCC
GGGKLMTIMQIHKENEADEGIQRQAALLAFSAFKELKTVILVDDDVDIFDWNDVMWTINT
CCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCEEECCCEEEEEEC
RFQADRDIMVLEGMRNHPLDPSELPDYDPARIRVRGMSSKLVLDGTVPYDMRDKFKRAAF
CCCCCCCEEEECCCCCCCCCHHHCCCCCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHH
KEIADWKKYLD
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 3-octaprenyl-4-hydroxybenzoate [C]

Specific reaction: 3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2 [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8892819 [H]