Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116492056

Identifier: 116492056

GI number: 116492056

Start: 299641

End: 300084

Strand: Direct

Name: 116492056

Synonym: PEPE_0252

Alternate gene names: NA

Gene position: 299641-300084 (Clockwise)

Preceding gene: 116492055

Following gene: 116492057

Centisome position: 16.35

GC content: 38.29

Gene sequence:

>444_bases
ATGCCCGAAAAAATAATCAAAAAAAGTAGTCAGAATAAGAATTCGTTCGAAGTTAACGTAACTCAGGCTGATTATACTAT
GACGGCTATGCTTGAACGCCAAAGTTTAGACTTATTGATTCAAATCATTGGCGGAGACGTTGCACATTATGGTGTTGTAA
TGACAATTGATAAAACCGGACACGAAGAAACCATTGCACTACCAAGCCGCCCGGGACATGTTCATCAAGAAAATGTTTTG
ATTGACCAAGTTGCTAAAGCAATCAAACCATTGTTGCAAGGTAATGCTTTTTTTGTATCAGGAATGCATGTGAACGATAT
AACTCCAGAACAAATGCATGCTGCTATTCCTATGGCCCAAACTTTAGGGGAAGAATTAGCTAAGTGGCTTGAAAAACATC
CTGGTAGTAAGCCAATTGTGAGCTATGCTAAGAGCAATAAATAA

Upstream 100 bases:

>100_bases
CCTAAAACGATTGATGATATCGTTAACCATACGGTTATGAAAATCCTAGATCATTTGCATATTCAAAATGATGTTAGTTC
GAGATGGGAGGGATTAGCTA

Downstream 100 bases:

>100_bases
TTAAAATAGAATCCTCAGCATTGTTTGTTTTGCAATGTTGAGGATTTTTTATAAGATTTGGCAATAAATGAGACTTAAAT
GTAGAACTTACTTTTTATAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MPEKIIKKSSQNKNSFEVNVTQADYTMTAMLERQSLDLLIQIIGGDVAHYGVVMTIDKTGHEETIALPSRPGHVHQENVL
IDQVAKAIKPLLQGNAFFVSGMHVNDITPEQMHAAIPMAQTLGEELAKWLEKHPGSKPIVSYAKSNK

Sequences:

>Translated_147_residues
MPEKIIKKSSQNKNSFEVNVTQADYTMTAMLERQSLDLLIQIIGGDVAHYGVVMTIDKTGHEETIALPSRPGHVHQENVL
IDQVAKAIKPLLQGNAFFVSGMHVNDITPEQMHAAIPMAQTLGEELAKWLEKHPGSKPIVSYAKSNK
>Mature_146_residues
PEKIIKKSSQNKNSFEVNVTQADYTMTAMLERQSLDLLIQIIGGDVAHYGVVMTIDKTGHEETIALPSRPGHVHQENVLI
DQVAKAIKPLLQGNAFFVSGMHVNDITPEQMHAAIPMAQTLGEELAKWLEKHPGSKPIVSYAKSNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16227; Mature: 16096

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEKIIKKSSQNKNSFEVNVTQADYTMTAMLERQSLDLLIQIIGGDVAHYGVVMTIDKTG
CCHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHCEEEEEEECCC
HEETIALPSRPGHVHQENVLIDQVAKAIKPLLQGNAFFVSGMHVNDITPEQMHAAIPMAQ
CCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCEECCCCHHHHHHHHHHHH
TLGEELAKWLEKHPGSKPIVSYAKSNK
HHHHHHHHHHHHCCCCCCHHHHCCCCC
>Mature Secondary Structure 
PEKIIKKSSQNKNSFEVNVTQADYTMTAMLERQSLDLLIQIIGGDVAHYGVVMTIDKTG
CHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHCEEEEEEECCC
HEETIALPSRPGHVHQENVLIDQVAKAIKPLLQGNAFFVSGMHVNDITPEQMHAAIPMAQ
CCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCEECCCCHHHHHHHHHHHH
TLGEELAKWLEKHPGSKPIVSYAKSNK
HHHHHHHHHHHHCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA