| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is tagE [H]
Identifier: 116492033
GI number: 116492033
Start: 265070
End: 266569
Strand: Direct
Name: tagE [H]
Synonym: PEPE_0225
Alternate gene names: 116492033
Gene position: 265070-266569 (Clockwise)
Preceding gene: 116492032
Following gene: 116492035
Centisome position: 14.47
GC content: 40.4
Gene sequence:
>1500_bases ATGAAATATTTTGTTAGTCGTAGTATTTACACTTTTAATTCTGGAGTGGAACACTCGCAAGCCAATCGTACCCTGCTATT TAACGCCAGTGGCGACCAGGCTCGGTATGTTACTAGAGATTATAATCGCTTATGGGTTAGGGATGCTGAGCGAGTTAACT TAAATTCAACCAATGTTTTGAATATGTATGATTTCTTTCAGGGAACTAGTGCGGTAGAGTGCGTTCAATTACCAGTTCGC GAATTTAAGCAACTGGCATTAAATGAATATCAATTGGTCGAACATGGAGCTGACTACTCAACGGTCGACCATGCCGGTCG CCAATTAGCTCGAATTAATATTATGCCTGGAACGGTCGGTTTAGTGGGTGATATTGAATATTATGATCGCTTTGAAACCG TTGTTAGTCGAGAAAACTTTGATTGGCGCGGATTTAAGTCTTCAATTGATTACTTTCACCCCGATGGCTCCCTAGGCGTA CGGCGTTTTTTGAATTTGGCAGGCGAAGTGGTTCTTGAAAATACCTACATGAATGTTGAAGGGCAATTACAGCCTACGAT GTGGAAATTAGTTAATTATCATGGAAAGAATTATCGATTTGACACGGAAGATCAGTTATTTCTATTTTTCTTAAATGAAG TTACCCAACAAACGACCGATAATGTAGTGGTATCCGATCACCGTGAGCTTGATTATGTGATTGCTGATGTAGAAAATGCT ACCTCTAAATGGGTTGCTTTGCATGGTTCACACGTGGATCAAGGTGGAACTCCTTTTGCTGCATATTCAATTGCCCTCCA AATCCGGGCTCAAGATTTTGATGGAATTATTGTTCCTACACAAGAACAACAGTTGGAACTTAAAGAGCAGTTTCCTGAGT TAAATGTCCAAGTCGCCCCTGATGTGGCGATTAGTCCCGAATTAATCAATTCCAAACCGGTCTGGTTACGGGACCGAATT GCGGGACGAATTATTTTTAGTGGTCGACTAGAAGCTGATAAACGACCAATGGAAGCCTTAAAAGCCTTCTTTAAGGTGCT CGAACAGTTCCCTGACGCTTCGTTGGAATTTAGGGGATATACTAACGACCAAAACCTGTTAAATGAAATGAAAAATTTAG TCGAACAACGTGGAGTTCAAGCTCAGGTTATCTTTGGTAATTATCTTACGGATAATGAAATTCAATCATTTTATAATCGT GCACAAGTTATAGTCAATACTTCGGTTAGTGAAGCTGCCGGTATGAACCTGATTGAAGCGATGGCGCACGGCGTTCCAGT GGTATCTTTTGATACTAAGTATGGATTGCATAGTTTAATTGAAAAAGATAAGAATGGGTATATTGTTACTAACGGGGATT ATGCACAGATGGCGCGCCGAATTCAAAAAATCTTAAGTGACGATGTTCTCTGGGCTCAATTAAGCCAAGGTGCTTACGCT AAAGCTCAGGAGTACCGTTTCGATGAAGTTTATCAAAAGTGGCATGCTATCTTAAAATAA
Upstream 100 bases:
>100_bases ATGTTTGGCACGCGTGGGAAGAATTGTTGCAAGATGCTGAAAATTGTTGGCCAGATAAGTTGAAGGCGATGCCAGAATAT CGTGGGGAGGTCCGTAAGTA
Downstream 100 bases:
>100_bases AAATAAGCTGTGGAAAGTTTTTAACTTTTACCACAGCTTATTTTTTGTACTTTTTAATTATTTAATAACGCGAAAACGAT CTTCGTCATTCATGAATTCT
Product: glycosyltransferase
Products: NA
Alternate protein names: Major teichoic acid biosynthesis protein E [H]
Number of amino acids: Translated: 499; Mature: 499
Protein sequence:
>499_residues MKYFVSRSIYTFNSGVEHSQANRTLLFNASGDQARYVTRDYNRLWVRDAERVNLNSTNVLNMYDFFQGTSAVECVQLPVR EFKQLALNEYQLVEHGADYSTVDHAGRQLARINIMPGTVGLVGDIEYYDRFETVVSRENFDWRGFKSSIDYFHPDGSLGV RRFLNLAGEVVLENTYMNVEGQLQPTMWKLVNYHGKNYRFDTEDQLFLFFLNEVTQQTTDNVVVSDHRELDYVIADVENA TSKWVALHGSHVDQGGTPFAAYSIALQIRAQDFDGIIVPTQEQQLELKEQFPELNVQVAPDVAISPELINSKPVWLRDRI AGRIIFSGRLEADKRPMEALKAFFKVLEQFPDASLEFRGYTNDQNLLNEMKNLVEQRGVQAQVIFGNYLTDNEIQSFYNR AQVIVNTSVSEAAGMNLIEAMAHGVPVVSFDTKYGLHSLIEKDKNGYIVTNGDYAQMARRIQKILSDDVLWAQLSQGAYA KAQEYRFDEVYQKWHAILK
Sequences:
>Translated_499_residues MKYFVSRSIYTFNSGVEHSQANRTLLFNASGDQARYVTRDYNRLWVRDAERVNLNSTNVLNMYDFFQGTSAVECVQLPVR EFKQLALNEYQLVEHGADYSTVDHAGRQLARINIMPGTVGLVGDIEYYDRFETVVSRENFDWRGFKSSIDYFHPDGSLGV RRFLNLAGEVVLENTYMNVEGQLQPTMWKLVNYHGKNYRFDTEDQLFLFFLNEVTQQTTDNVVVSDHRELDYVIADVENA TSKWVALHGSHVDQGGTPFAAYSIALQIRAQDFDGIIVPTQEQQLELKEQFPELNVQVAPDVAISPELINSKPVWLRDRI AGRIIFSGRLEADKRPMEALKAFFKVLEQFPDASLEFRGYTNDQNLLNEMKNLVEQRGVQAQVIFGNYLTDNEIQSFYNR AQVIVNTSVSEAAGMNLIEAMAHGVPVVSFDTKYGLHSLIEKDKNGYIVTNGDYAQMARRIQKILSDDVLWAQLSQGAYA KAQEYRFDEVYQKWHAILK >Mature_499_residues MKYFVSRSIYTFNSGVEHSQANRTLLFNASGDQARYVTRDYNRLWVRDAERVNLNSTNVLNMYDFFQGTSAVECVQLPVR EFKQLALNEYQLVEHGADYSTVDHAGRQLARINIMPGTVGLVGDIEYYDRFETVVSRENFDWRGFKSSIDYFHPDGSLGV RRFLNLAGEVVLENTYMNVEGQLQPTMWKLVNYHGKNYRFDTEDQLFLFFLNEVTQQTTDNVVVSDHRELDYVIADVENA TSKWVALHGSHVDQGGTPFAAYSIALQIRAQDFDGIIVPTQEQQLELKEQFPELNVQVAPDVAISPELINSKPVWLRDRI AGRIIFSGRLEADKRPMEALKAFFKVLEQFPDASLEFRGYTNDQNLLNEMKNLVEQRGVQAQVIFGNYLTDNEIQSFYNR AQVIVNTSVSEAAGMNLIEAMAHGVPVVSFDTKYGLHSLIEKDKNGYIVTNGDYAQMARRIQKILSDDVLWAQLSQGAYA KAQEYRFDEVYQKWHAILK
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015397 - InterPro: IPR001296 [H]
Pfam domain/function: PF09318 DUF1975; PF00534 Glycos_transf_1 [H]
EC number: =2.4.1.52 [H]
Molecular weight: Translated: 57188; Mature: 57188
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYFVSRSIYTFNSGVEHSQANRTLLFNASGDQARYVTRDYNRLWVRDAERVNLNSTNVL CCEEEECEEEEECCCCCCCCCCCEEEEECCCCCCEEEECCCCEEEEECCCEECCCCCCEE NMYDFFQGTSAVECVQLPVREFKQLALNEYQLVEHGADYSTVDHAGRQLARINIMPGTVG EHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCHHHHHCCEEEEEEECCCCCE LVGDIEYYDRFETVVSRENFDWRGFKSSIDYFHPDGSLGVRRFLNLAGEVVLENTYMNVE EEECHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHCCEEEEEEEECCC GQLQPTMWKLVNYHGKNYRFDTEDQLFLFFLNEVTQQTTDNVVVSDHRELDYVIADVENA CCCCHHHHHHHHHCCCCCEECCCCCEEHHHHHHHHHHCCCCEEEECCCCCEEEEEECCCC TSKWVALHGSHVDQGGTPFAAYSIALQIRAQDFDGIIVPTQEQQLELKEQFPELNVQVAP CCCEEEEECCCCCCCCCCEEEEEEEEEEEECCCCCEEECCCHHHHHHHHCCCCCCEEECC DVAISPELINSKPVWLRDRIAGRIIFSGRLEADKRPMEALKAFFKVLEQFPDASLEFRGY CCCCCHHHCCCCCCEEHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECC TNDQNLLNEMKNLVEQRGVQAQVIFGNYLTDNEIQSFYNRAQVIVNTSVSEAAGMNLIEA CCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCEEEEECCHHHHHCHHHHHH MAHGVPVVSFDTKYGLHSLIEKDKNGYIVTNGDYAQMARRIQKILSDDVLWAQLSQGAYA HHCCCEEEEECCCHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCCHHHHHHCCCCHH KAQEYRFDEVYQKWHAILK HHHHCCHHHHHHHHHHHCC >Mature Secondary Structure MKYFVSRSIYTFNSGVEHSQANRTLLFNASGDQARYVTRDYNRLWVRDAERVNLNSTNVL CCEEEECEEEEECCCCCCCCCCCEEEEECCCCCCEEEECCCCEEEEECCCEECCCCCCEE NMYDFFQGTSAVECVQLPVREFKQLALNEYQLVEHGADYSTVDHAGRQLARINIMPGTVG EHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCHHHHHCCEEEEEEECCCCCE LVGDIEYYDRFETVVSRENFDWRGFKSSIDYFHPDGSLGVRRFLNLAGEVVLENTYMNVE EEECHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHCCEEEEEEEECCC GQLQPTMWKLVNYHGKNYRFDTEDQLFLFFLNEVTQQTTDNVVVSDHRELDYVIADVENA CCCCHHHHHHHHHCCCCCEECCCCCEEHHHHHHHHHHCCCCEEEECCCCCEEEEEECCCC TSKWVALHGSHVDQGGTPFAAYSIALQIRAQDFDGIIVPTQEQQLELKEQFPELNVQVAP CCCEEEEECCCCCCCCCCEEEEEEEEEEEECCCCCEEECCCHHHHHHHHCCCCCCEEECC DVAISPELINSKPVWLRDRIAGRIIFSGRLEADKRPMEALKAFFKVLEQFPDASLEFRGY CCCCCHHHCCCCCCEEHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECC TNDQNLLNEMKNLVEQRGVQAQVIFGNYLTDNEIQSFYNRAQVIVNTSVSEAAGMNLIEA CCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCEEEEECCHHHHHCHHHHHH MAHGVPVVSFDTKYGLHSLIEKDKNGYIVTNGDYAQMARRIQKILSDDVLWAQLSQGAYA HHCCCEEEEECCCHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCCHHHHHHCCCCHH KAQEYRFDEVYQKWHAILK HHHHCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2507871; 9384377 [H]