| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is tagE [H]
Identifier: 116492032
GI number: 116492032
Start: 263469
End: 265070
Strand: Direct
Name: tagE [H]
Synonym: PEPE_0224
Alternate gene names: 116492032
Gene position: 263469-265070 (Clockwise)
Preceding gene: 116492031
Following gene: 116492033
Centisome position: 14.38
GC content: 39.76
Gene sequence:
>1602_bases ATGATATTTTTTATTAATGCACAAATGCCAGAAAAGAAGTCCGGAATTGAACACGCGCAGTTAAAGCGCCTTAAGCTCTT TAATAAAATGCACCGAGAGGCTCGTATTGTTTTGCGAGATTGGAGTCCAGAAACTCATCGACTTACCGCCTTAGCAGGAA TCGATGATGAACATGTAATTAGCATGTTTGATTACTACCAACAGGCGATGCACGTTGAAAATAAGATTGTCACGCCTCCA GATTTAGATTTAGGAGTTGAAAATCTGAAATTCAGTTCAGATTTTGATCACCAGCGTTATTTAGCGGAAACCATTGATGG TCAATTAGTTGCCAGAATCAATGTTGATATTAAAGATGATCATGTGTTATCAACTGAACTCTTTGATGGATTTGGCAATC TTTACCGAGTTGATCATTATGATAGTCGTGGTTTTATCTCGCTTAGTCAGTGGTATACCCCCGATAATCAAATTGGGACT GAAGAATGGAAAACACCAGAAGGTCGAGTAGCGATTGAGGCTTTTACCAGAAAAAATGCGCAAGGCGAGATGAAACAATC AGCCTGGAAATTAACAACGCAAGCTGGAAAAGTTTATCAATTTGACACAATCGAAGAGCTGACAAAACATTTTTTTGATG ATTTAAATAATGACTTTTGGTCAGAAACGCAACCTAATATCTATATTTTAGATCGGGATCATTTAGGCGATTGGGCGCTC TTAAATATGGAAAAACCCGCCTATCGGGTGATTCATTTACACAATTCGCATGCAACTGATGCTCAAAATCCAATGCATTC AACTTTAAACCAACACTATGAGTTTGCCTTGAAATCAATGGATCGTTATGACGCATTTATCAGCGCTACCAAAAAGCAGA CCCAAGATGTACGGGCTCGTTTCCAACCCAAAACACATTTATTCACTATTCCAGTTGGGATTGTTCCAGAACAACTGTTA AACAGTAAACGAGTTGCGGTTAAAGAACGCCAATTTGGTAAAATTGTTGCATTTGCGCGGATTGCTTGGGAAAAACATCT AGATGATTTGGTCCGAGCCGTCGCATTGGTTCACCAGGTAGTCCCTGAAGTTACCTTAGATCTTTACGGCTATGCGGATG GTTCTAATAATTACGAGGCTCGACGATTAGTAGAAGAGGTTATCGAAGCCAATCAATTAGAAGACGTAGTCAAATTGAAG GGTTACACTACCGATATTGATAAAGTTGAAAATAACGCAATGATGTTTGGTCTAACTTCTCGAATGGAAGGATTTAATTT GGCGGTAATGGAAGGCATTGCTCATGGATTGATTTCATTTTCATACGATGTTAATTATGGACCAAATGAAATTGTAGAAG ATGGTGTAAATGGTAAGGTGGTTCCTTATGGAGATTATGAAGCCCTCGCTCAAGCCATGATTAAAGTGCTAAAAGACCCA CAATTAGCCCAGAAATATTCAACCGGAGCCTACGATTCAGCTGAGCGTTACTCGGATGAAAATGTTTGGCACGCGTGGGA AGAATTGTTGCAAGATGCTGAAAATTGTTGGCCAGATAAGTTGAAGGCGATGCCAGAATATCGTGGGGAGGTCCGTAAGT AA
Upstream 100 bases:
>100_bases CTTAATTCTTAACCTTGATTTCACAAATAAGAAGCTAAATTATACTATAATGGACTAATAATTAACGGAAAAATCAGGTG GAAACACGAGGAAATGAAAA
Downstream 100 bases:
>100_bases TGAAATATTTTGTTAGTCGTAGTATTTACACTTTTAATTCTGGAGTGGAACACTCGCAAGCCAATCGTACCCTGCTATTT AACGCCAGTGGCGACCAGGC
Product: glycosyltransferase
Products: NA
Alternate protein names: Major teichoic acid biosynthesis protein E [H]
Number of amino acids: Translated: 533; Mature: 533
Protein sequence:
>533_residues MIFFINAQMPEKKSGIEHAQLKRLKLFNKMHREARIVLRDWSPETHRLTALAGIDDEHVISMFDYYQQAMHVENKIVTPP DLDLGVENLKFSSDFDHQRYLAETIDGQLVARINVDIKDDHVLSTELFDGFGNLYRVDHYDSRGFISLSQWYTPDNQIGT EEWKTPEGRVAIEAFTRKNAQGEMKQSAWKLTTQAGKVYQFDTIEELTKHFFDDLNNDFWSETQPNIYILDRDHLGDWAL LNMEKPAYRVIHLHNSHATDAQNPMHSTLNQHYEFALKSMDRYDAFISATKKQTQDVRARFQPKTHLFTIPVGIVPEQLL NSKRVAVKERQFGKIVAFARIAWEKHLDDLVRAVALVHQVVPEVTLDLYGYADGSNNYEARRLVEEVIEANQLEDVVKLK GYTTDIDKVENNAMMFGLTSRMEGFNLAVMEGIAHGLISFSYDVNYGPNEIVEDGVNGKVVPYGDYEALAQAMIKVLKDP QLAQKYSTGAYDSAERYSDENVWHAWEELLQDAENCWPDKLKAMPEYRGEVRK
Sequences:
>Translated_533_residues MIFFINAQMPEKKSGIEHAQLKRLKLFNKMHREARIVLRDWSPETHRLTALAGIDDEHVISMFDYYQQAMHVENKIVTPP DLDLGVENLKFSSDFDHQRYLAETIDGQLVARINVDIKDDHVLSTELFDGFGNLYRVDHYDSRGFISLSQWYTPDNQIGT EEWKTPEGRVAIEAFTRKNAQGEMKQSAWKLTTQAGKVYQFDTIEELTKHFFDDLNNDFWSETQPNIYILDRDHLGDWAL LNMEKPAYRVIHLHNSHATDAQNPMHSTLNQHYEFALKSMDRYDAFISATKKQTQDVRARFQPKTHLFTIPVGIVPEQLL NSKRVAVKERQFGKIVAFARIAWEKHLDDLVRAVALVHQVVPEVTLDLYGYADGSNNYEARRLVEEVIEANQLEDVVKLK GYTTDIDKVENNAMMFGLTSRMEGFNLAVMEGIAHGLISFSYDVNYGPNEIVEDGVNGKVVPYGDYEALAQAMIKVLKDP QLAQKYSTGAYDSAERYSDENVWHAWEELLQDAENCWPDKLKAMPEYRGEVRK >Mature_533_residues MIFFINAQMPEKKSGIEHAQLKRLKLFNKMHREARIVLRDWSPETHRLTALAGIDDEHVISMFDYYQQAMHVENKIVTPP DLDLGVENLKFSSDFDHQRYLAETIDGQLVARINVDIKDDHVLSTELFDGFGNLYRVDHYDSRGFISLSQWYTPDNQIGT EEWKTPEGRVAIEAFTRKNAQGEMKQSAWKLTTQAGKVYQFDTIEELTKHFFDDLNNDFWSETQPNIYILDRDHLGDWAL LNMEKPAYRVIHLHNSHATDAQNPMHSTLNQHYEFALKSMDRYDAFISATKKQTQDVRARFQPKTHLFTIPVGIVPEQLL NSKRVAVKERQFGKIVAFARIAWEKHLDDLVRAVALVHQVVPEVTLDLYGYADGSNNYEARRLVEEVIEANQLEDVVKLK GYTTDIDKVENNAMMFGLTSRMEGFNLAVMEGIAHGLISFSYDVNYGPNEIVEDGVNGKVVPYGDYEALAQAMIKVLKDP QLAQKYSTGAYDSAERYSDENVWHAWEELLQDAENCWPDKLKAMPEYRGEVRK
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015397 - InterPro: IPR001296 [H]
Pfam domain/function: PF09318 DUF1975; PF00534 Glycos_transf_1 [H]
EC number: =2.4.1.52 [H]
Molecular weight: Translated: 61495; Mature: 61495
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFFINAQMPEKKSGIEHAQLKRLKLFNKMHREARIVLRDWSPETHRLTALAGIDDEHVI CEEEEECCCCCHHCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEEEEECCCHHHHH SMFDYYQQAMHVENKIVTPPDLDLGVENLKFSSDFDHQRYLAETIDGQLVARINVDIKDD HHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHCCCEEEEEEEEEECCC HVLSTELFDGFGNLYRVDHYDSRGFISLSQWYTPDNQIGTEEWKTPEGRVAIEAFTRKNA CEEHHHHHHCCCCEEEEECCCCCCCEEHHHCCCCCCCCCCHHCCCCCCCEEEEEHHCCCC QGEMKQSAWKLTTQAGKVYQFDTIEELTKHFFDDLNNDFWSETQPNIYILDRDHLGDWAL CCHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCEEE LNMEKPAYRVIHLHNSHATDAQNPMHSTLNQHYEFALKSMDRYDAFISATKKQTQDVRAR EECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FQPKTHLFTIPVGIVPEQLLNSKRVAVKERQFGKIVAFARIAWEKHLDDLVRAVALVHQV CCCCCEEEEEECCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPEVTLDLYGYADGSNNYEARRLVEEVIEANQLEDVVKLKGYTTDIDKVENNAMMFGLTS HHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCEEEEEEHH RMEGFNLAVMEGIAHGLISFSYDVNYGPNEIVEDGVNGKVVPYGDYEALAQAMIKVLKDP HCCCCCHHHHHHHHHHHHEEEEECCCCCHHHHHCCCCCCEEECCCHHHHHHHHHHHHCCH QLAQKYSTGAYDSAERYSDENVWHAWEELLQDAENCWPDKLKAMPEYRGEVRK HHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCHHHHHCCHHHHCCCCC >Mature Secondary Structure MIFFINAQMPEKKSGIEHAQLKRLKLFNKMHREARIVLRDWSPETHRLTALAGIDDEHVI CEEEEECCCCCHHCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEEEEECCCHHHHH SMFDYYQQAMHVENKIVTPPDLDLGVENLKFSSDFDHQRYLAETIDGQLVARINVDIKDD HHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHCCCEEEEEEEEEECCC HVLSTELFDGFGNLYRVDHYDSRGFISLSQWYTPDNQIGTEEWKTPEGRVAIEAFTRKNA CEEHHHHHHCCCCEEEEECCCCCCCEEHHHCCCCCCCCCCHHCCCCCCCEEEEEHHCCCC QGEMKQSAWKLTTQAGKVYQFDTIEELTKHFFDDLNNDFWSETQPNIYILDRDHLGDWAL CCHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCEEE LNMEKPAYRVIHLHNSHATDAQNPMHSTLNQHYEFALKSMDRYDAFISATKKQTQDVRAR EECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FQPKTHLFTIPVGIVPEQLLNSKRVAVKERQFGKIVAFARIAWEKHLDDLVRAVALVHQV CCCCCEEEEEECCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPEVTLDLYGYADGSNNYEARRLVEEVIEANQLEDVVKLKGYTTDIDKVENNAMMFGLTS HHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCEEEEEEHH RMEGFNLAVMEGIAHGLISFSYDVNYGPNEIVEDGVNGKVVPYGDYEALAQAMIKVLKDP HCCCCCHHHHHHHHHHHHEEEEECCCCCHHHHHCCCCCCEEECCCHHHHHHHHHHHHCCH QLAQKYSTGAYDSAERYSDENVWHAWEELLQDAENCWPDKLKAMPEYRGEVRK HHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCHHHHHCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2507871; 9384377 [H]