| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116492035
Identifier: 116492035
GI number: 116492035
Start: 267390
End: 268157
Strand: Direct
Name: 116492035
Synonym: PEPE_0227
Alternate gene names: NA
Gene position: 267390-268157 (Clockwise)
Preceding gene: 116492033
Following gene: 116492038
Centisome position: 14.59
GC content: 38.93
Gene sequence:
>768_bases TTGAAAAAGATTAGTACAATTTTAGTTTCAATAATGACCTTATTTTTGCTAGCAGCTTGTGGAAAGAATGCTAAGCCAGA AACAACAACTAAAGAGGATACTGTCCAAAAAACAGCAACTAAATTAAAAGTAGATACAAAAAAAGAGAAAACCAATGCTT TGGGTAATGCTTTAATTAATATTAAAACTAATGCCAAGGCAGAAGTTAAAATTACCAATTTAAAGACACGAAAAACCGAA GTTGCCAAGGCAGATGCTGAAGGTAAAGTAGTTTACAATGTTCATTTAGGTAAGAAAGTTAAGTCGATTCAATTTGAAAT TGGATCAACGGCTAGTGGGCATACAGCTAGTTCAACAATTAAAGTTACTATTATTAATAATTCAGACGCGTATACAGAGT GGGCGGCTAATAGTGCATCGACATCTACAGATGCTGATGCAGTTAGTATGGATGAATCATCTTCCAGTGAAGAAAGTAGT GTAGATACTCAATCAACGGACCAAAGTGCAGATACTACGGGAGTCGATACCACTACGGATGCTGCTAACAACACCCCAGC TGGTGGGGCAGCAACTACTGGAACTGCGGGTAATACAGGTGGCAGTAACTACACTCCGGCTAATGCTGGAAATACCACTT CGAATGCTAATTCGACGGCTAATAATTCAACTGCCAATTCTACCACTACGGATTCCGATGCGGCTGCTGATAATGGTGCC AATGATGTGGCAGTGCAGACTGTTACTGAAAAAGATACGGAAAACTAA
Upstream 100 bases:
>100_bases TTTTAAAACAATTGCAAGCATTTTGAAAAATTCTGTTTGACCGATGATAAATACACTGTAATAATTAAAGTTAATAACCG AAGTGGTGGAGGATGAAGCT
Downstream 100 bases:
>100_bases TATAAAAAACGCGAAACAAGTTGCGGGCCTTGACCCTTAAATTTGTTTCGCGTTTTTAATTTAAATGGATTAAGCTTGGA ATTTCGCTAAATGATTAACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MKKISTILVSIMTLFLLAACGKNAKPETTTKEDTVQKTATKLKVDTKKEKTNALGNALINIKTNAKAEVKITNLKTRKTE VAKADAEGKVVYNVHLGKKVKSIQFEIGSTASGHTASSTIKVTIINNSDAYTEWAANSASTSTDADAVSMDESSSSEESS VDTQSTDQSADTTGVDTTTDAANNTPAGGAATTGTAGNTGGSNYTPANAGNTTSNANSTANNSTANSTTTDSDAAADNGA NDVAVQTVTEKDTEN
Sequences:
>Translated_255_residues MKKISTILVSIMTLFLLAACGKNAKPETTTKEDTVQKTATKLKVDTKKEKTNALGNALINIKTNAKAEVKITNLKTRKTE VAKADAEGKVVYNVHLGKKVKSIQFEIGSTASGHTASSTIKVTIINNSDAYTEWAANSASTSTDADAVSMDESSSSEESS VDTQSTDQSADTTGVDTTTDAANNTPAGGAATTGTAGNTGGSNYTPANAGNTTSNANSTANNSTANSTTTDSDAAADNGA NDVAVQTVTEKDTEN >Mature_255_residues MKKISTILVSIMTLFLLAACGKNAKPETTTKEDTVQKTATKLKVDTKKEKTNALGNALINIKTNAKAEVKITNLKTRKTE VAKADAEGKVVYNVHLGKKVKSIQFEIGSTASGHTASSTIKVTIINNSDAYTEWAANSASTSTDADAVSMDESSSSEESS VDTQSTDQSADTTGVDTTTDAANNTPAGGAATTGTAGNTGGSNYTPANAGNTTSNANSTANNSTANSTTTDSDAAADNGA NDVAVQTVTEKDTEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26145; Mature: 26145
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKISTILVSIMTLFLLAACGKNAKPETTTKEDTVQKTATKLKVDTKKEKTNALGNALIN CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHEEECCCHHHHHHHCCEEEE IKTNAKAEVKITNLKTRKTEVAKADAEGKVVYNVHLGKKVKSIQFEIGSTASGHTASSTI EECCCEEEEEEECCCCCHHHHHHCCCCCEEEEEEECCCEEEEEEEEECCCCCCCCCCCEE KVTIINNSDAYTEWAANSASTSTDADAVSMDESSSSEESSVDTQSTDQSADTTGVDTTTD EEEEECCCCCCHHHCCCCCCCCCCCCEEECCCCCCCCHHCCCCCCCCCCCCCCCCCCCCC AANNTPAGGAATTGTAGNTGGSNYTPANAGNTTSNANSTANNSTANSTTTDSDAAADNGA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NDVAVQTVTEKDTEN CCEEEEEECCCCCCC >Mature Secondary Structure MKKISTILVSIMTLFLLAACGKNAKPETTTKEDTVQKTATKLKVDTKKEKTNALGNALIN CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHEEECCCHHHHHHHCCEEEE IKTNAKAEVKITNLKTRKTEVAKADAEGKVVYNVHLGKKVKSIQFEIGSTASGHTASSTI EECCCEEEEEEECCCCCHHHHHHCCCCCEEEEEEECCCEEEEEEEEECCCCCCCCCCCEE KVTIINNSDAYTEWAANSASTSTDADAVSMDESSSSEESSVDTQSTDQSADTTGVDTTTD EEEEECCCCCCHHHCCCCCCCCCCCCEEECCCCCCCCHHCCCCCCCCCCCCCCCCCCCCC AANNTPAGGAATTGTAGNTGGSNYTPANAGNTTSNANSTANNSTANSTTTDSDAAADNGA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NDVAVQTVTEKDTEN CCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA