Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
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Accession | NC_008508 |
Length | 3,614,446 |
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The map label for this gene is 116328463
Identifier: 116328463
GI number: 116328463
Start: 2101238
End: 2102335
Strand: Direct
Name: 116328463
Synonym: LBL_1807
Alternate gene names: NA
Gene position: 2101238-2102335 (Clockwise)
Preceding gene: 116328462
Following gene: 116328465
Centisome position: 58.13
GC content: 40.71
Gene sequence:
>1098_bases TTGGTAACAAAAATTCCTTCCAAACTCAAATTATCCATCGCCGTTTTCGTTTTAAGTTTTTTATTCTTTCTCATTTACAC GGTTACAGACGACCTCATTCTCAAGTCGCCTTTAGGGCAGCAAAAGGCAATCGCTCTTTCCATTCGTCTTGCAATTTCCG TCTCTTTTTCCACTTTACTCGCATCTTTTGTGTTCTATTCCGTTAAGCTAATATACTCTTCAATGCGTTCACTAGTCACA CTCGTTCAAGACTGGGGAAACGACGACGTATATGAAGAAACTCCAATCGCAGAAAGAAACGATGAGATCAGTGAGTTAGT TCGGGCTTTTCGTTTGAAATTTTTTCAACAGAAAGAGTTGGAAGATGCTCCCTCCCAAGAAGCTTTAGGCGAAAGAACCA AAGAGCTTTCGGACTCGATACAAAGAGCCTTTTACAGAATCTATTTGCCTAAAATTCAGAACCTGGACGTTTCTCTTCTT CCGAGAATGAGCGGTAACTCTAACTGCGATTATGTGAATGTCATTCCGAGTATGGATGGCTGTGTAGGAGTCCTCGCCGG ATTTCCAAGCTTTGGGGTCTTAGAATCCGCATTTAAAGCAAGACTCGAAGGGATTTTTTCCCTAGCCAACGAAGCCGGTG GAATTCGAGGAGAAGAACTGATCTTTAAGATCGGTAAAATTCTTTCCAAAATGCCGGTTCCATTTTTAAACCTTTCCCTT TTCTATCTCATAACCAAAACAGGCGAACTCGGATTCATTCACTTCCAAGAACTTCCTGCATTCGTTTACAAAAATGGCGA ATTAAACTCTTTAGAAAAGACGAAAGCCCGTTACTTCGATTACAAAGCGATCGATTTGGACGTAAAAAAAACCATTCTGA AAATGGGAGAATATTGGATCCTAGTTTCCGATCGAACCTATTCCACAATCGGAGTTTCCGGCTCCGAATTCACGAAACAA CTTCAAGACACCCTAGAAGGAAAGAATCTTCAAAATTCCAGAGATCTGGTTTTAAATTGCGGAAGAATTTTAGAACAAAA ATTTGGAAAACAAATTCTGGAAACGTCCGCCCTTCTCGCCGTAGCCCGAAAACAATAA
Upstream 100 bases:
>100_bases CCGGGACCGGATTTGATTTCGATGTTGTTTTTATTCGTTCCACTGGCAGTTTTGTTCGTGGTGTCGATCGTTCTCATGAA GGTAATAGAGAGAGCATAAC
Downstream 100 bases:
>100_bases CCTTCTGCTTTCAGATTTGTGCGGATAACTCTAAGTCTGATTTGTCGCTCTAGAACGAATTCTTTCGATCAAACGAAACG TTTCGAATTCCGGTTCAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 365; Mature: 365
Protein sequence:
>365_residues MVTKIPSKLKLSIAVFVLSFLFFLIYTVTDDLILKSPLGQQKAIALSIRLAISVSFSTLLASFVFYSVKLIYSSMRSLVT LVQDWGNDDVYEETPIAERNDEISELVRAFRLKFFQQKELEDAPSQEALGERTKELSDSIQRAFYRIYLPKIQNLDVSLL PRMSGNSNCDYVNVIPSMDGCVGVLAGFPSFGVLESAFKARLEGIFSLANEAGGIRGEELIFKIGKILSKMPVPFLNLSL FYLITKTGELGFIHFQELPAFVYKNGELNSLEKTKARYFDYKAIDLDVKKTILKMGEYWILVSDRTYSTIGVSGSEFTKQ LQDTLEGKNLQNSRDLVLNCGRILEQKFGKQILETSALLAVARKQ
Sequences:
>Translated_365_residues MVTKIPSKLKLSIAVFVLSFLFFLIYTVTDDLILKSPLGQQKAIALSIRLAISVSFSTLLASFVFYSVKLIYSSMRSLVT LVQDWGNDDVYEETPIAERNDEISELVRAFRLKFFQQKELEDAPSQEALGERTKELSDSIQRAFYRIYLPKIQNLDVSLL PRMSGNSNCDYVNVIPSMDGCVGVLAGFPSFGVLESAFKARLEGIFSLANEAGGIRGEELIFKIGKILSKMPVPFLNLSL FYLITKTGELGFIHFQELPAFVYKNGELNSLEKTKARYFDYKAIDLDVKKTILKMGEYWILVSDRTYSTIGVSGSEFTKQ LQDTLEGKNLQNSRDLVLNCGRILEQKFGKQILETSALLAVARKQ >Mature_365_residues MVTKIPSKLKLSIAVFVLSFLFFLIYTVTDDLILKSPLGQQKAIALSIRLAISVSFSTLLASFVFYSVKLIYSSMRSLVT LVQDWGNDDVYEETPIAERNDEISELVRAFRLKFFQQKELEDAPSQEALGERTKELSDSIQRAFYRIYLPKIQNLDVSLL PRMSGNSNCDYVNVIPSMDGCVGVLAGFPSFGVLESAFKARLEGIFSLANEAGGIRGEELIFKIGKILSKMPVPFLNLSL FYLITKTGELGFIHFQELPAFVYKNGELNSLEKTKARYFDYKAIDLDVKKTILKMGEYWILVSDRTYSTIGVSGSEFTKQ LQDTLEGKNLQNSRDLVLNCGRILEQKFGKQILETSALLAVARKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41098; Mature: 41098
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTKIPSKLKLSIAVFVLSFLFFLIYTVTDDLILKSPLGQQKAIALSIRLAISVSFSTLL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEHHHHHHH ASFVFYSVKLIYSSMRSLVTLVQDWGNDDVYEETPIAERNDEISELVRAFRLKFFQQKEL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH EDAPSQEALGERTKELSDSIQRAFYRIYLPKIQNLDVSLLPRMSGNSNCDYVNVIPSMDG CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCEEEECCCCCH CVGVLAGFPSFGVLESAFKARLEGIFSLANEAGGIRGEELIFKIGKILSKMPVPFLNLSL HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHE FYLITKTGELGFIHFQELPAFVYKNGELNSLEKTKARYFDYKAIDLDVKKTILKMGEYWI EEEEECCCCEEEEEHHHCCHHHCCCCCCCHHHHHHHHHCCCEEECHHHHHHHHHCCCEEE LVSDRTYSTIGVSGSEFTKQLQDTLEGKNLQNSRDLVLNCGRILEQKFGKQILETSALLA EEECCCEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VARKQ HHCCC >Mature Secondary Structure MVTKIPSKLKLSIAVFVLSFLFFLIYTVTDDLILKSPLGQQKAIALSIRLAISVSFSTLL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEHHHHHHH ASFVFYSVKLIYSSMRSLVTLVQDWGNDDVYEETPIAERNDEISELVRAFRLKFFQQKEL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH EDAPSQEALGERTKELSDSIQRAFYRIYLPKIQNLDVSLLPRMSGNSNCDYVNVIPSMDG CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCEEEECCCCCH CVGVLAGFPSFGVLESAFKARLEGIFSLANEAGGIRGEELIFKIGKILSKMPVPFLNLSL HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHE FYLITKTGELGFIHFQELPAFVYKNGELNSLEKTKARYFDYKAIDLDVKKTILKMGEYWI EEEEECCCCEEEEEHHHCCHHHCCCCCCCHHHHHHHHHCCCEEECHHHHHHHHHCCCEEE LVSDRTYSTIGVSGSEFTKQLQDTLEGKNLQNSRDLVLNCGRILEQKFGKQILETSALLA EEECCCEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VARKQ HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA