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The map label for this gene is tatC [H]

Identifier: 116328462

GI number: 116328462

Start: 2100427

End: 2101236

Strand: Direct

Name: tatC [H]

Synonym: LBL_1806

Alternate gene names: 116328462

Gene position: 2100427-2101236 (Clockwise)

Preceding gene: 116328461

Following gene: 116328463

Centisome position: 58.11

GC content: 41.23

Gene sequence:

>810_bases
TTGAAGAAACCCATTCACAGAATAGCCGGAAAGAAAAAATCGCAAACGACCCTCCATCCGGATACTTCGAGAGAATCCGT
ATCAAGAGATCGAGAAAAATACATGACGCTCGGAGATCATCTAGAAGAACTGAGGATGGTTCTACTTCGATCTCTTCTCG
TAATTGCCGTAATCATGGGGGGTTCCCTATTTTTCGGAGAAGAAATTCACAAAATTCTCGCACAACCGTATAAGAACGTG
TTAGGATCTCAAACAACCTTCTATCAGATCAAATTAATGGCTCCGTTTATGATCTACTTGAAGAGTTCGTTTATGATCTC
TATCTTATTGGGCCTTCCCTTTGTCCTCTTTTTTCTTTGGGGTTTTATTTCTCCGGCTTTAGATTCTAAAGCCGATCGTT
ACGGTAAATTTTTAATTCTTTTCAGCACCTTGCTTTTTTGGTTCGGCGTTTGGCTTTGTTGGACCGAGGCCTTCGAGAAT
CTTCTTAGGATCTTTCTCGTCAACTTTCGTCCACCCGACATCGAAGCAAGGCTTCCCATCGACGAATACTACGAAATTTT
TTTTAATATCCATTTGATTTTCGGTTTATCTTTTCAGCTTCCTATTGTACTCATTCTTCTTGGCAGTTTAGGAATCATCC
GCTCTTCTTTCCTTATCTTAAAATGGAGAGAAGCGATCATCGTTCTTGCGATTGCGGCCGCTGTTCTTTCTCCGGGACCG
GATTTGATTTCGATGTTGTTTTTATTCGTTCCACTGGCAGTTTTGTTCGTGGTGTCGATCGTTCTCATGAAGGTAATAGA
GAGAGCATAA

Upstream 100 bases:

>100_bases
GAGAATCGGACGATTCTTCCCAACAAATCGGCCAAGAACAAGTGCAATCGGCTTCGAAAGAAGAATCCAAAAACTCTAAA
TCTAAAAAATCCAAATCCGT

Downstream 100 bases:

>100_bases
CTTGGTAACAAAAATTCCTTCCAAACTCAAATTATCCATCGCCGTTTTCGTTTTAAGTTTTTTATTCTTTCTCATTTACA
CGGTTACAGACGACCTCATT

Product: Sec-independent protein secretion pathway translocase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MKKPIHRIAGKKKSQTTLHPDTSRESVSRDREKYMTLGDHLEELRMVLLRSLLVIAVIMGGSLFFGEEIHKILAQPYKNV
LGSQTTFYQIKLMAPFMIYLKSSFMISILLGLPFVLFFLWGFISPALDSKADRYGKFLILFSTLLFWFGVWLCWTEAFEN
LLRIFLVNFRPPDIEARLPIDEYYEIFFNIHLIFGLSFQLPIVLILLGSLGIIRSSFLILKWREAIIVLAIAAAVLSPGP
DLISMLFLFVPLAVLFVVSIVLMKVIERA

Sequences:

>Translated_269_residues
MKKPIHRIAGKKKSQTTLHPDTSRESVSRDREKYMTLGDHLEELRMVLLRSLLVIAVIMGGSLFFGEEIHKILAQPYKNV
LGSQTTFYQIKLMAPFMIYLKSSFMISILLGLPFVLFFLWGFISPALDSKADRYGKFLILFSTLLFWFGVWLCWTEAFEN
LLRIFLVNFRPPDIEARLPIDEYYEIFFNIHLIFGLSFQLPIVLILLGSLGIIRSSFLILKWREAIIVLAIAAAVLSPGP
DLISMLFLFVPLAVLFVVSIVLMKVIERA
>Mature_269_residues
MKKPIHRIAGKKKSQTTLHPDTSRESVSRDREKYMTLGDHLEELRMVLLRSLLVIAVIMGGSLFFGEEIHKILAQPYKNV
LGSQTTFYQIKLMAPFMIYLKSSFMISILLGLPFVLFFLWGFISPALDSKADRYGKFLILFSTLLFWFGVWLCWTEAFEN
LLRIFLVNFRPPDIEARLPIDEYYEIFFNIHLIFGLSFQLPIVLILLGSLGIIRSSFLILKWREAIIVLAIAAAVLSPGP
DLISMLFLFVPLAVLFVVSIVLMKVIERA

Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei

COG id: COG0805

COG function: function code U; Sec-independent protein secretion pathway component TatC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tatC family [H]

Homologues:

Organism=Escherichia coli, GI2367313, Length=229, Percent_Identity=29.6943231441048, Blast_Score=98, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002033
- InterPro:   IPR019820
- InterPro:   IPR019822 [H]

Pfam domain/function: PF00902 TatC [H]

EC number: NA

Molecular weight: Translated: 30852; Mature: 30852

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA