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The map label for this gene is 116249182

Identifier: 116249182

GI number: 116249182

Start: 563071

End: 563700

Strand: Reverse

Name: 116249182

Synonym: pRL120518

Alternate gene names: NA

Gene position: 563700-563071 (Counterclockwise)

Preceding gene: 116249201

Following gene: 116249181

Centisome position: 64.79

GC content: 59.05

Gene sequence:

>630_bases
ATGGATCAGGCATTGAACGACACCGGCTGGCGCGGATCACAGGAGGGATGGCTGGAAGCAGCTTACCACTCGTTGCTGGA
TTCCGGCGTGGATTCGGTGAAAATTCTGCCGCTGGCGAAGAAGCTCAACCTCTCGCGCACGAGTTTCTACTGGTTCTTCA
AGGACCGGGAGGAACTGCTGGCCGGGCTCGTGGCGCGGTGGCGCGACAAAAACACCGGCAATATCGTCAAGCAGTCCGAA
GCCTACGCCGAATCGCTCGCCGAGGCGATGCTCAACGTCTTCGACTGCTGGCTCAACAATGATCTGTTCGACGCCAGGTT
CGAATTCGCAGTGCGCAGTTGGGCGCTGCAGTCCGACGAGATTCTCGCCGAGGTCCGGCAAGCCGACCAGCTTCGGCTTG
ATGCGCTCAAGCGCATGTTTATCCGCTTCGGGCTACCAGAAGCGACATCGGATGTCCGAGCGCGAACAACTTACCTCGTG
CAGATCGGATACATCTCCATGCAAGCCAAGGAGGAACTCGCCGTCCGCATGAAACGGATTCCCGAATATATCGCGATCTA
CACCGGCGAAGTGCCGCAGCAGAGGGAGCTCGATCGCTTCTTCTCCCGGCATGGCTACAGGCCGGGTTAG

Upstream 100 bases:

>100_bases
TGTACATATGTGTCAATATTGAAAACATATGGGTCGCCGTTTTCGACACCAATGTACATTTTCCTTGTGCGCGGCCTGAT
AATTTGATAGGAGATAGCCC

Downstream 100 bases:

>100_bases
GGAAGGCCGGGATGAGCGTTTCCTTGAGGATCGGTATCATTGGCGGCGGAGGCTGGCTTGGCGGAGCAATCGCCGGCTCG
ATCCTTGATGCCGGCCTGGT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator Protein TetR Family; Transcriptional Regulatory Protein; Transcriptional Regulator Protein; Regulatory Protein TetR; TetR Family Regulatory Protein

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MDQALNDTGWRGSQEGWLEAAYHSLLDSGVDSVKILPLAKKLNLSRTSFYWFFKDREELLAGLVARWRDKNTGNIVKQSE
AYAESLAEAMLNVFDCWLNNDLFDARFEFAVRSWALQSDEILAEVRQADQLRLDALKRMFIRFGLPEATSDVRARTTYLV
QIGYISMQAKEELAVRMKRIPEYIAIYTGEVPQQRELDRFFSRHGYRPG

Sequences:

>Translated_209_residues
MDQALNDTGWRGSQEGWLEAAYHSLLDSGVDSVKILPLAKKLNLSRTSFYWFFKDREELLAGLVARWRDKNTGNIVKQSE
AYAESLAEAMLNVFDCWLNNDLFDARFEFAVRSWALQSDEILAEVRQADQLRLDALKRMFIRFGLPEATSDVRARTTYLV
QIGYISMQAKEELAVRMKRIPEYIAIYTGEVPQQRELDRFFSRHGYRPG
>Mature_209_residues
MDQALNDTGWRGSQEGWLEAAYHSLLDSGVDSVKILPLAKKLNLSRTSFYWFFKDREELLAGLVARWRDKNTGNIVKQSE
AYAESLAEAMLNVFDCWLNNDLFDARFEFAVRSWALQSDEILAEVRQADQLRLDALKRMFIRFGLPEATSDVRARTTYLV
QIGYISMQAKEELAVRMKRIPEYIAIYTGEVPQQRELDRFFSRHGYRPG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24242; Mature: 24242

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQALNDTGWRGSQEGWLEAAYHSLLDSGVDSVKILPLAKKLNLSRTSFYWFFKDREELL
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCCCCEEEEEECCHHHHH
AGLVARWRDKNTGNIVKQSEAYAESLAEAMLNVFDCWLNNDLFDARFEFAVRSWALQSDE
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHH
ILAEVRQADQLRLDALKRMFIRFGLPEATSDVRARTTYLVQIGYISMQAKEELAVRMKRI
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHEEEEEECHHHHHHHHHHHHHHHHC
PEYIAIYTGEVPQQRELDRFFSRHGYRPG
CHHEEEECCCCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDQALNDTGWRGSQEGWLEAAYHSLLDSGVDSVKILPLAKKLNLSRTSFYWFFKDREELL
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCCCCEEEEEECCHHHHH
AGLVARWRDKNTGNIVKQSEAYAESLAEAMLNVFDCWLNNDLFDARFEFAVRSWALQSDE
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHH
ILAEVRQADQLRLDALKRMFIRFGLPEATSDVRARTTYLVQIGYISMQAKEELAVRMKRI
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHEEEEEECHHHHHHHHHHHHHHHHC
PEYIAIYTGEVPQQRELDRFFSRHGYRPG
CHHEEEECCCCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA