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The map label for this gene is 116249163

Identifier: 116249163

GI number: 116249163

Start: 541455

End: 542102

Strand: Reverse

Name: 116249163

Synonym: pRL120499

Alternate gene names: NA

Gene position: 542102-541455 (Counterclockwise)

Preceding gene: 116249164

Following gene: 116249162

Centisome position: 62.31

GC content: 58.49

Gene sequence:

>648_bases
ATGCTCCGTTACATTGCATTCGCCGACGATTTGTCGGCGTGGTTCGGCAAGGTGTTCGCGTGGGGGATACTCATCATGGC
CTTCGGCGTCGGCTATGAGGTTGTTGCACGCTACCTCTTTCGCGCGCCGACCCCCTGGGCCTTCGATCTGAGCTACATGC
TCTATGGAACGATCTTCATGATGGCGGGAGCGTATACCCTCTCGCGTGATGGCCATGTGCGCGGCGACTTCATCTACCGG
CTCTGGAAACCGCGCACGCAGGCCAGGCTGGAACTGGTGTTGTACTTCATCTTTTTCTTTCCCGGTATAACCGCGCTGGT
GTTCTCGGGCTGGAAATATGCCGCACGCAGTTGGGGCTACCTGGAGGTCAGTTCCAACAGTCCCGCCGGTGTGCCGATCT
TCCAGTTCAAGGCCGTGATCGTCGCCGCCGGCATTCTCCTGTTCCTGCAGGGCGTGGCGCAGGTCTTCCGCTGCATTCTC
TGCATAAGGACGGGCGAATGGCCGAAGCAGGCCGAAGATGTCGAAGAACTGGAAAAGGTACTACTGGAAACAAAAAGCCT
GGACGTGCTCAAGTCCGAGGACGAGGGTTTCCTTCCGTCGCGGGAACTTGACGCTGGACGTGAACCACGGGATCGGGACG
CTCAATGA

Upstream 100 bases:

>100_bases
ATGAGCACTATTTCCCCGGAAAATTGAACCTCGGAAAATAGATGGTGAAGGCCCGGTATTTCCGGGCCTCGTCCCTCATC
GAGGTTAGGGAGGCGCTTGC

Downstream 100 bases:

>100_bases
CGGATGCACATATTGCCGTCGGGATGCTCCTCATCCTGATCCTCACCATCTTCCTCGGCTTCCCGGTGGCGTTCACCTTG
ATGGCTCTGGGTGTCGGCTT

Product: putative transporter dctQ related transmembrane protein

Products: NA

Alternate protein names: Mannitol Transporter; TRAP Transporter DctQ-Like Membrane Protein; TRAP Transporter Small Transmembrane Protein; TRAP Transporter DctQ Family Protein; Tripartite Transporter Small Subunit; Transporter DctQ Related Transmembrane Protein; Small Integral Membrane Tranport Protein; Trap Transporter Dctq Family; TRAP Dicarboxylate Transporter Subunit DctQ; TRAP-Type Transporter Small Permease Component; Trap Dicarboxylate Transporter Dctm Subunit; Trap-Type Transport System Small Permease Component; TRAP-Type Large Permease Component; TRAP-T Family Tripartite Transporter; Transporter DctQ-Related Transmembrane Protein; TRAP Transporter DctQ-Like Membrane Protein Family; TRAP Dicarboxylate Transporter DctM Subunit; TRAP-Type Transport System Small Permease Component; TRAP Dicarboxylate Transporter DctQ Subunit; Tripartite ATP-Independent Periplasmic; TRAP-Type Mannitol/Chloroaromatic Compound Transport System; C4-Dicarboxylate Transporter Small Subunit

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MLRYIAFADDLSAWFGKVFAWGILIMAFGVGYEVVARYLFRAPTPWAFDLSYMLYGTIFMMAGAYTLSRDGHVRGDFIYR
LWKPRTQARLELVLYFIFFFPGITALVFSGWKYAARSWGYLEVSSNSPAGVPIFQFKAVIVAAGILLFLQGVAQVFRCIL
CIRTGEWPKQAEDVEELEKVLLETKSLDVLKSEDEGFLPSRELDAGREPRDRDAQ

Sequences:

>Translated_215_residues
MLRYIAFADDLSAWFGKVFAWGILIMAFGVGYEVVARYLFRAPTPWAFDLSYMLYGTIFMMAGAYTLSRDGHVRGDFIYR
LWKPRTQARLELVLYFIFFFPGITALVFSGWKYAARSWGYLEVSSNSPAGVPIFQFKAVIVAAGILLFLQGVAQVFRCIL
CIRTGEWPKQAEDVEELEKVLLETKSLDVLKSEDEGFLPSRELDAGREPRDRDAQ
>Mature_215_residues
MLRYIAFADDLSAWFGKVFAWGILIMAFGVGYEVVARYLFRAPTPWAFDLSYMLYGTIFMMAGAYTLSRDGHVRGDFIYR
LWKPRTQARLELVLYFIFFFPGITALVFSGWKYAARSWGYLEVSSNSPAGVPIFQFKAVIVAAGILLFLQGVAQVFRCIL
CIRTGEWPKQAEDVEELEKVLLETKSLDVLKSEDEGFLPSRELDAGREPRDRDAQ

Specific function: Unknown

COG id: COG4665

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, small permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24531; Mature: 24531

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRYIAFADDLSAWFGKVFAWGILIMAFGVGYEVVARYLFRAPTPWAFDLSYMLYGTIFM
CCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
MAGAYTLSRDGHVRGDFIYRLWKPRTQARLELVLYFIFFFPGITALVFSGWKYAARSWGY
HHCCCEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCE
LEVSSNSPAGVPIFQFKAVIVAAGILLFLQGVAQVFRCILCIRTGEWPKQAEDVEELEKV
EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
LLETKSLDVLKSEDEGFLPSRELDAGREPRDRDAQ
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLRYIAFADDLSAWFGKVFAWGILIMAFGVGYEVVARYLFRAPTPWAFDLSYMLYGTIFM
CCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
MAGAYTLSRDGHVRGDFIYRLWKPRTQARLELVLYFIFFFPGITALVFSGWKYAARSWGY
HHCCCEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCE
LEVSSNSPAGVPIFQFKAVIVAAGILLFLQGVAQVFRCILCIRTGEWPKQAEDVEELEKV
EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
LLETKSLDVLKSEDEGFLPSRELDAGREPRDRDAQ
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA